RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 PCDHGA10Q9Y5H3 936 aa9.76□□□□□ -0.85
R3HDM1-217ENST00000486532 SPDYE16A6NNV3 312 aaPredicted RBP9.75□□□□□ -0.85
R3HDM1-217ENST00000486532 DPYSL4O14531 572 aa9.75□□□□□ -0.85
R3HDM1-217ENST00000486532 KCTD12Q96CX2 325 aaKnown RBP9.75□□□□□ -0.85
R3HDM1-217ENST00000486532 BHMG1C9JSJ3 638 aaPredicted RBP9.73□□□□□ -0.85
R3HDM1-217ENST00000486532 E2F4Q16254 413 aa9.72□□□□□ -0.85
R3HDM1-217ENST00000486532 ONECUT3O60422 494 aaPredicted RBP9.71□□□□□ -0.86
R3HDM1-217ENST00000486532 RABGEF1Q9UJ41 708 aa9.71□□□□□ -0.86
R3HDM1-217ENST00000486532 RGS20O76081 388 aa9.69□□□□□ -0.86
R3HDM1-217ENST00000486532 PDIA6Q15084 440 aa9.69□□□□□ -0.86
R3HDM1-217ENST00000486532 WNT2BQ93097 391 aa9.68□□□□□ -0.86
R3HDM1-217ENST00000486532 ARIH1Q9Y4X5 557 aaPredicted RBP9.68□□□□□ -0.86
R3HDM1-217ENST00000486532 C6orf132Q5T0Z8 1188 aa9.67□□□□□ -0.86
R3HDM1-217ENST00000486532 LAPTM4BQ86VI4 370 aa9.67□□□□□ -0.86
R3HDM1-217ENST00000486532 PTPN5P54829 565 aa9.65□□□□□ -0.86
R3HDM1-217ENST00000486532 THSD4Q6ZMP0 1018 aa9.65□□□□□ -0.86
R3HDM1-217ENST00000486532 DDX12PQ92771 950 aa9.65□□□□□ -0.86
R3HDM1-217ENST00000486532 IFFO2Q5TF58 517 aa9.64□□□□□ -0.87
R3HDM1-217ENST00000486532 ANKK1Q8NFD2 765 aa9.64□□□□□ -0.87
R3HDM1-217ENST00000486532 COL9A1P20849 921 aa9.63□□□□□ -0.87
R3HDM1-217ENST00000486532 NBR1Q14596 966 aa9.63□□□□□ -0.87
R3HDM1-217ENST00000486532 MAP3K7O43318 606 aa9.62□□□□□ -0.87
R3HDM1-217ENST00000486532 EN1Q05925 392 aaPredicted RBP9.62□□□□□ -0.87
R3HDM1-217ENST00000486532 CERKQ8TCT0 537 aa9.62□□□□□ -0.87
R3HDM1-217ENST00000486532 RBM33Q96EV2 1170 aaKnown RBP9.62□□□□□ -0.87
R3HDM1-217ENST00000486532 TRIM6-TRIM34B2RNG4 842 aa9.61□□□□□ -0.87
R3HDM1-217ENST00000486532 PROX2Q3B8N5 592 aa9.61□□□□□ -0.87
R3HDM1-217ENST00000486532 IRX2Q9BZI1 471 aaPredicted RBP9.61□□□□□ -0.87
R3HDM1-217ENST00000486532 NYAP1Q6ZVC0 841 aa9.6□□□□□ -0.87
R3HDM1-217ENST00000486532 PACS2Q86VP3 889 aa9.6□□□□□ -0.87
R3HDM1-217ENST00000486532 KIAA1468Q9P260 1216 aa9.6□□□□□ -0.87
R3HDM1-217ENST00000486532 FAM98CQ17RN3 349 aaKnown RBP9.56□□□□□ -0.88
R3HDM1-217ENST00000486532 ZFRQ96KR1 1074 aaKnown RBP9.56□□□□□ -0.88
R3HDM1-217ENST00000486532 SOWAHBA6NEL2 793 aa9.55□□□□□ -0.88
R3HDM1-217ENST00000486532 GRXCR2A6NFK2 248 aa9.55□□□□□ -0.88
R3HDM1-217ENST00000486532 A0A0G2JS52 829 aa9.54□□□□□ -0.88
R3HDM1-217ENST00000486532 ARHGEF1Q92888 912 aaKnown RBP9.52□□□□□ -0.89
R3HDM1-217ENST00000486532 PRSS12P56730 875 aa9.51□□□□□ -0.89
R3HDM1-217ENST00000486532 TSR1Q2NL82 804 aaKnown RBP9.51□□□□□ -0.89
R3HDM1-217ENST00000486532 LRCH3Q96II8 777 aa9.51□□□□□ -0.89
R3HDM1-217ENST00000486532 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.51□□□□□ -0.89
R3HDM1-217ENST00000486532 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
R3HDM1-217ENST00000486532 NBPF26B4DH59 902 aa9.5□□□□□ -0.89
R3HDM1-217ENST00000486532 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
R3HDM1-217ENST00000486532 SEPT9Q9UHD8 586 aaPredicted RBP9.5□□□□□ -0.89
R3HDM1-217ENST00000486532 HDGFP51858 240 aaKnown RBP9.49□□□□□ -0.89
R3HDM1-217ENST00000486532 P3H3Q8IVL6 736 aa9.49□□□□□ -0.89
R3HDM1-217ENST00000486532 BCAMP50895 628 aa9.48□□□□□ -0.89
R3HDM1-217ENST00000486532 TSR3Q9UJK0 312 aaKnown RBP9.48□□□□□ -0.89
R3HDM1-217ENST00000486532 TSKSQ9UJT2 592 aa9.48□□□□□ -0.89
R3HDM1-217ENST00000486532 OSBPP22059 807 aa9.47□□□□□ -0.89
R3HDM1-217ENST00000486532 TSHZ2Q9NRE2 1034 aa9.47□□□□□ -0.89
R3HDM1-217ENST00000486532 NECTIN2Q92692 538 aa9.46□□□□□ -0.9
R3HDM1-217ENST00000486532 ITGBL1O95965 494 aaPredicted RBP9.45□□□□□ -0.9
R3HDM1-217ENST00000486532 TATDN2Q93075 761 aa9.44□□□□□ -0.9
R3HDM1-217ENST00000486532 HPS5Q9UPZ3 1129 aa9.44□□□□□ -0.9
R3HDM1-217ENST00000486532 SLC4A3P48751 1232 aa9.43□□□□□ -0.9
R3HDM1-217ENST00000486532 PPP4CP60510 307 aa9.43□□□□□ -0.9
R3HDM1-217ENST00000486532 WBP1LQ9NX94 342 aa9.43□□□□□ -0.9
R3HDM1-217ENST00000486532 PNMA3Q9UL41 463 aa9.43□□□□□ -0.9
R3HDM1-217ENST00000486532 KCNC4Q03721 635 aa9.42□□□□□ -0.9
R3HDM1-217ENST00000486532 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
R3HDM1-217ENST00000486532 PRIM1P49642 420 aaKnown RBP9.39□□□□□ -0.91
R3HDM1-217ENST00000486532 SAMD7Q7Z3H4 446 aa9.39□□□□□ -0.91
R3HDM1-217ENST00000486532 CDHR5Q9HBB8 845 aa9.39□□□□□ -0.91
R3HDM1-217ENST00000486532 NUDT18Q6ZVK8 323 aa9.38□□□□□ -0.91
R3HDM1-217ENST00000486532 SMAPO00193 183 aa9.37□□□□□ -0.91
R3HDM1-217ENST00000486532 Q6ZNB5 142 aa9.37□□□□□ -0.91
R3HDM1-217ENST00000486532 FAM198AQ9UFP1 575 aa9.36□□□□□ -0.91
R3HDM1-217ENST00000486532 PLCB2Q00722 1185 aa9.35□□□□□ -0.91
R3HDM1-217ENST00000486532 PADI6Q6TGC4 694 aa9.35□□□□□ -0.91
R3HDM1-217ENST00000486532 SLF2Q8IX21 1173 aa9.35□□□□□ -0.91
R3HDM1-217ENST00000486532 TTC13Q8NBP0 860 aa9.35□□□□□ -0.91
R3HDM1-217ENST00000486532 NPDC1Q9NQX5 325 aaPredicted RBP9.33□□□□□ -0.92
R3HDM1-217ENST00000486532 RNF40O75150 1001 aa9.32□□□□□ -0.92
R3HDM1-217ENST00000486532 MLLT3P42568 568 aaPredicted RBP9.32□□□□□ -0.92
R3HDM1-217ENST00000486532 SMYD5Q6GMV2 418 aa9.32□□□□□ -0.92
R3HDM1-217ENST00000486532 PRR14Q9BWN1 585 aa9.32□□□□□ -0.92
R3HDM1-217ENST00000486532 RBM46Q8TBY0 533 aaKnown RBP9.3□□□□□ -0.92
R3HDM1-217ENST00000486532 IL21Q9HBE4 155 aa9.3□□□□□ -0.92
R3HDM1-217ENST00000486532 NUTM2FA1L443 756 aa9.29□□□□□ -0.92
R3HDM1-217ENST00000486532 PTGDRQ13258 359 aa9.29□□□□□ -0.92
R3HDM1-217ENST00000486532 LAPTM4AQ15012 233 aa9.29□□□□□ -0.92
R3HDM1-217ENST00000486532 FCHSD2O94868 740 aa9.28□□□□□ -0.92
R3HDM1-217ENST00000486532 C3orf80F5H4A9 247 aa9.27□□□□□ -0.93
R3HDM1-217ENST00000486532 DNAJB2P25686 324 aa9.27□□□□□ -0.93
R3HDM1-217ENST00000486532 SWT1Q5T5J6 900 aaKnown RBP9.27□□□□□ -0.93
R3HDM1-217ENST00000486532 EYA1Q99502 592 aa9.26□□□□□ -0.93
R3HDM1-217ENST00000486532 TJAP1Q5JTD0 557 aa9.25□□□□□ -0.93
R3HDM1-217ENST00000486532 MTRQ99707 1265 aa9.25□□□□□ -0.93
R3HDM1-217ENST00000486532 SEMA3EO15041 775 aa9.23□□□□□ -0.93
R3HDM1-217ENST00000486532 OATP04181 439 aa9.22□□□□□ -0.93
R3HDM1-217ENST00000486532 GGCXP38435 758 aa9.22□□□□□ -0.93
R3HDM1-217ENST00000486532 APLP1P51693 650 aa9.21□□□□□ -0.94
R3HDM1-217ENST00000486532 HAP1P54257 671 aaPredicted RBP9.21□□□□□ -0.94
R3HDM1-217ENST00000486532 HIC1Q14526 733 aa9.21□□□□□ -0.94
R3HDM1-217ENST00000486532 RSPH4AQ5TD94 716 aa9.21□□□□□ -0.94
R3HDM1-217ENST00000486532 ADGRG1Q9Y653 693 aa9.21□□□□□ -0.94
R3HDM1-217ENST00000486532 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.2□□□□□ -0.94
R3HDM1-217ENST00000486532 TESPA1A2RU30 521 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms