RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 MINK1Q8N4C8 1332 aaPredicted RBP17.48■□□□□ 0.39
PKD1-219ENST00000486339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.48■□□□□ 0.39
PKD1-219ENST00000486339 HFM1A2PYH4 1435 aa17.47■□□□□ 0.39
PKD1-219ENST00000486339 CHMP4BQ9H444 224 aaKnown RBP17.47■□□□□ 0.39
PKD1-219ENST00000486339 PCF11O94913 1555 aaKnown RBP17.46■□□□□ 0.39
PKD1-219ENST00000486339 RAPGEF3O95398 923 aa17.46■□□□□ 0.39
PKD1-219ENST00000486339 SUPT6HQ7KZ85 1726 aaKnown RBP17.46■□□□□ 0.38
PKD1-219ENST00000486339 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.44■□□□□ 0.38
PKD1-219ENST00000486339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.44■□□□□ 0.38
PKD1-219ENST00000486339 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
PKD1-219ENST00000486339 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
PKD1-219ENST00000486339 DAPK1P53355 1430 aa17.44■□□□□ 0.38
PKD1-219ENST00000486339 MYBBP1AQ9BQG0 1328 aaKnown RBP17.43■□□□□ 0.38
PKD1-219ENST00000486339 B4GALNT3Q6L9W6 998 aa17.42■□□□□ 0.38
PKD1-219ENST00000486339 CENPJQ9HC77 1338 aaPredicted RBP17.42■□□□□ 0.38
PKD1-219ENST00000486339 CALD1Q05682 793 aaKnown RBP17.42■□□□□ 0.38
PKD1-219ENST00000486339 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
PKD1-219ENST00000486339 RGS3P49796 1198 aa17.41■□□□□ 0.38
PKD1-219ENST00000486339 CGNL1Q0VF96 1302 aa17.41■□□□□ 0.38
PKD1-219ENST00000486339 AMPHP49418 695 aa17.4■□□□□ 0.38
PKD1-219ENST00000486339 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
PKD1-219ENST00000486339 KIAA1107Q9UPP5 1409 aa17.39■□□□□ 0.37
PKD1-219ENST00000486339 CCDC146Q8IYE0 955 aa17.39■□□□□ 0.37
PKD1-219ENST00000486339 TMEM132EQ6IEE7 984 aa17.37■□□□□ 0.37
PKD1-219ENST00000486339 GOLGA2Q08379 1002 aa17.37■□□□□ 0.37
PKD1-219ENST00000486339 CFAP70Q5T0N1 1121 aa17.37■□□□□ 0.37
PKD1-219ENST00000486339 MAP3K1Q13233 1512 aa17.36■□□□□ 0.37
PKD1-219ENST00000486339 KIF7Q2M1P5 1343 aa17.36■□□□□ 0.37
PKD1-219ENST00000486339 NAIPQ13075 1403 aa17.36■□□□□ 0.37
PKD1-219ENST00000486339 COG3Q96JB2 828 aa17.35■□□□□ 0.37
PKD1-219ENST00000486339 CCDC7Q96M83 1385 aa17.35■□□□□ 0.37
PKD1-219ENST00000486339 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
PKD1-219ENST00000486339 LTV1Q96GA3 475 aaPredicted RBP17.35■□□□□ 0.37
PKD1-219ENST00000486339 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
PKD1-219ENST00000486339 CD109Q6YHK3 1445 aa17.34■□□□□ 0.37
PKD1-219ENST00000486339 CCDC141Q6ZP82 1450 aa17.33■□□□□ 0.37
PKD1-219ENST00000486339 PDE3BQ13370 1112 aa17.33■□□□□ 0.37
PKD1-219ENST00000486339 OS9Q13438 667 aaPredicted RBP17.32■□□□□ 0.36
PKD1-219ENST00000486339 SLC52A1Q9NWF4 448 aa17.32■□□□□ 0.36
PKD1-219ENST00000486339 BECN1Q14457 450 aa17.31■□□□□ 0.36
PKD1-219ENST00000486339 CASC1Q6TDU7 716 aa17.31■□□□□ 0.36
PKD1-219ENST00000486339 NPHP1O15259 732 aa17.3■□□□□ 0.36
PKD1-219ENST00000486339 NBPF1Q3BBV0 1214 aa17.3■□□□□ 0.36
PKD1-219ENST00000486339 LMOD3Q0VAK6 560 aa17.29■□□□□ 0.36
PKD1-219ENST00000486339 CAMSAP2Q08AD1 1489 aa17.29■□□□□ 0.36
PKD1-219ENST00000486339 DDRGK1Q96HY6 314 aa17.29■□□□□ 0.36
PKD1-219ENST00000486339 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
PKD1-219ENST00000486339 TXNDC2Q86VQ3 553 aa17.28■□□□□ 0.36
PKD1-219ENST00000486339 ABCC5O15440 1437 aa17.28■□□□□ 0.36
PKD1-219ENST00000486339 RRP7AQ9Y3A4 280 aaKnown RBP17.28■□□□□ 0.36
PKD1-219ENST00000486339 KIF14Q15058 1648 aa17.27■□□□□ 0.36
PKD1-219ENST00000486339 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.36
PKD1-219ENST00000486339 EIF5BO60841 1220 aaKnown RBP17.27■□□□□ 0.35
PKD1-219ENST00000486339 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
PKD1-219ENST00000486339 SMC4Q9NTJ3 1288 aa17.26■□□□□ 0.35
PKD1-219ENST00000486339 ERICH6BQ5W0A0 696 aa17.26■□□□□ 0.35
PKD1-219ENST00000486339 STK31Q9BXU1 1019 aa17.25■□□□□ 0.35
PKD1-219ENST00000486339 CABP2Q9NPB3 220 aa17.25■□□□□ 0.35
PKD1-219ENST00000486339 PTPN23Q9H3S7 1636 aa17.25■□□□□ 0.35
PKD1-219ENST00000486339 ADGRL1O94910 1474 aa17.25■□□□□ 0.35
PKD1-219ENST00000486339 NBR1Q14596 966 aa17.24■□□□□ 0.35
PKD1-219ENST00000486339 ANP32BQ92688 251 aaKnown RBP17.24■□□□□ 0.35
PKD1-219ENST00000486339 CCDC9Q9Y3X0 531 aaKnown RBP17.24■□□□□ 0.35
PKD1-219ENST00000486339 ITPRIPQ8IWB1 547 aa17.23■□□□□ 0.35
PKD1-219ENST00000486339 PSME1Q06323 249 aa17.22■□□□□ 0.35
PKD1-219ENST00000486339 CNTLNQ9NXG0 1405 aa17.22■□□□□ 0.35
PKD1-219ENST00000486339 APAF1O14727 1248 aa17.22■□□□□ 0.35
PKD1-219ENST00000486339 THEMISQ8N1K5 641 aaPredicted RBP17.22■□□□□ 0.35
PKD1-219ENST00000486339 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
PKD1-219ENST00000486339 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
PKD1-219ENST00000486339 DIAPH1O60610 1272 aaKnown RBP17.2■□□□□ 0.34
PKD1-219ENST00000486339 ZNF330Q9Y3S2 320 aaPredicted RBP17.2■□□□□ 0.34
PKD1-219ENST00000486339 AKNAQ7Z591 1439 aa17.2■□□□□ 0.34
PKD1-219ENST00000486339 GGNBP2Q9H3C7 697 aa17.2■□□□□ 0.34
PKD1-219ENST00000486339 PRAM1Q96QH2 718 aa17.19■□□□□ 0.34
PKD1-219ENST00000486339 THOC2Q8NI27 1593 aaKnown RBP17.19■□□□□ 0.34
PKD1-219ENST00000486339 POGZQ7Z3K3 1410 aa17.19■□□□□ 0.34
PKD1-219ENST00000486339 ZBED9Q6R2W3 1325 aa17.18■□□□□ 0.34
PKD1-219ENST00000486339 ANKRD30BQ9BXX2 1392 aa17.18■□□□□ 0.34
PKD1-219ENST00000486339 ANP32EQ9BTT0 268 aa17.18■□□□□ 0.34
PKD1-219ENST00000486339 ERBINQ96RT1 1412 aa17.18■□□□□ 0.34
PKD1-219ENST00000486339 ATP10BO94823 1461 aa17.17■□□□□ 0.34
PKD1-219ENST00000486339 RPGRIP1LQ68CZ1 1315 aa17.17■□□□□ 0.34
PKD1-219ENST00000486339 APBB1O00213 710 aa17.17■□□□□ 0.34
PKD1-219ENST00000486339 RWDD1Q9H446 243 aaPredicted RBP17.17■□□□□ 0.34
PKD1-219ENST00000486339 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
PKD1-219ENST00000486339 ATF3P18847 181 aa17.16■□□□□ 0.34
PKD1-219ENST00000486339 FANCAO15360 1455 aa17.16■□□□□ 0.34
PKD1-219ENST00000486339 ADAMTS12P58397 1594 aa17.16■□□□□ 0.34
PKD1-219ENST00000486339 E9PSI1 815 aa17.15■□□□□ 0.34
PKD1-219ENST00000486339 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
PKD1-219ENST00000486339 ELL2O00472 640 aaPredicted RBP17.15■□□□□ 0.34
PKD1-219ENST00000486339 NUP153P49790 1475 aaKnown RBP17.14■□□□□ 0.33
PKD1-219ENST00000486339 NGEFQ8N5V2 710 aa17.14■□□□□ 0.33
PKD1-219ENST00000486339 RAPGEF6Q8TEU7 1601 aa17.13■□□□□ 0.33
PKD1-219ENST00000486339 SLC4A10Q6U841 1118 aa17.13■□□□□ 0.33
PKD1-219ENST00000486339 SLC26A8Q96RN1 970 aa17.13■□□□□ 0.33
PKD1-219ENST00000486339 KCNJ4P48050 445 aa17.12■□□□□ 0.33
PKD1-219ENST00000486339 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
PKD1-219ENST00000486339 UGGT2Q9NYU1 1516 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms