RNA–Protein interactions for RNA: ENST00000485952.1

SPTLC3-206, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-206ENST00000485952 PSDA5PKW4 1024 aaPredicted RBP9.22□□□□□ -0.93
SPTLC3-206ENST00000485952 TRIM66O15016 1216 aa9.22□□□□□ -0.93
SPTLC3-206ENST00000485952 TSR1Q2NL82 804 aaKnown RBP9.21□□□□□ -0.94
SPTLC3-206ENST00000485952 CERKQ8TCT0 537 aa9.21□□□□□ -0.94
SPTLC3-206ENST00000485952 CCDC102AQ96A19 550 aa9.21□□□□□ -0.94
SPTLC3-206ENST00000485952 CDHR5Q9HBB8 845 aa9.21□□□□□ -0.94
SPTLC3-206ENST00000485952 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
SPTLC3-206ENST00000485952 FECHP22830 423 aa9.19□□□□□ -0.94
SPTLC3-206ENST00000485952 PDE4DQ08499 809 aa9.19□□□□□ -0.94
SPTLC3-206ENST00000485952 PPP4R3BQ5MIZ7 849 aa9.19□□□□□ -0.94
SPTLC3-206ENST00000485952 C6orf132Q5T0Z8 1188 aa9.19□□□□□ -0.94
SPTLC3-206ENST00000485952 NPDC1Q9NQX5 325 aaPredicted RBP9.19□□□□□ -0.94
SPTLC3-206ENST00000485952 DAXXQ9UER7 740 aaPredicted RBP9.19□□□□□ -0.94
SPTLC3-206ENST00000485952 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
SPTLC3-206ENST00000485952 OTUD5Q96G74 571 aa9.18□□□□□ -0.94
SPTLC3-206ENST00000485952 HOXB1P14653 301 aaPredicted RBP9.17□□□□□ -0.94
SPTLC3-206ENST00000485952 LHX8Q68G74 356 aa9.17□□□□□ -0.94
SPTLC3-206ENST00000485952 ADAM33Q9BZ11 813 aa9.16□□□□□ -0.94
SPTLC3-206ENST00000485952 AMHR2Q16671 573 aa9.14□□□□□ -0.95
SPTLC3-206ENST00000485952 KDM4CQ9H3R0 1056 aa9.14□□□□□ -0.95
SPTLC3-206ENST00000485952 GPBP1L1Q9HC44 474 aaPredicted RBP9.14□□□□□ -0.95
SPTLC3-206ENST00000485952 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
SPTLC3-206ENST00000485952 PTPREP23469 700 aa9.12□□□□□ -0.95
SPTLC3-206ENST00000485952 TTLL12Q14166 644 aaPredicted RBP9.12□□□□□ -0.95
SPTLC3-206ENST00000485952 BCL2L12Q9HB09 334 aa9.12□□□□□ -0.95
SPTLC3-206ENST00000485952 OATP04181 439 aa9.11□□□□□ -0.95
SPTLC3-206ENST00000485952 PRSS12P56730 875 aa9.1□□□□□ -0.95
SPTLC3-206ENST00000485952 PADI6Q6TGC4 694 aa9.1□□□□□ -0.95
SPTLC3-206ENST00000485952 KCNH8Q96L42 1107 aa9.1□□□□□ -0.95
SPTLC3-206ENST00000485952 PARP9Q8IXQ6 854 aa9.09□□□□□ -0.95
SPTLC3-206ENST00000485952 PPP1R3GB7ZBB8 358 aa9.08□□□□□ -0.96
SPTLC3-206ENST00000485952 CDCA7LQ96GN5 454 aa9.08□□□□□ -0.96
SPTLC3-206ENST00000485952 CLCN1P35523 988 aa9.07□□□□□ -0.96
SPTLC3-206ENST00000485952 C14orf37Q86TY3 774 aa9.07□□□□□ -0.96
SPTLC3-206ENST00000485952 IL27Q8NEV9 243 aa9.07□□□□□ -0.96
SPTLC3-206ENST00000485952 METTL3Q86U44 580 aaKnown RBP9.06□□□□□ -0.96
SPTLC3-206ENST00000485952 TTC13Q8NBP0 860 aa9.06□□□□□ -0.96
SPTLC3-206ENST00000485952 DDRGK1Q96HY6 314 aa9.06□□□□□ -0.96
SPTLC3-206ENST00000485952 ADGRG1Q9Y653 693 aa9.06□□□□□ -0.96
SPTLC3-206ENST00000485952 ERBB3P21860 1342 aa9.05□□□□□ -0.96
SPTLC3-206ENST00000485952 COL9A1P20849 921 aa9.05□□□□□ -0.96
SPTLC3-206ENST00000485952 RBM46Q8TBY0 533 aaKnown RBP9.05□□□□□ -0.96
SPTLC3-206ENST00000485952 FAM161AQ3B820 660 aa9.04□□□□□ -0.96
SPTLC3-206ENST00000485952 GIGYF2Q6Y7W6 1299 aaKnown RBP9.04□□□□□ -0.96
SPTLC3-206ENST00000485952 KCNK17Q96T54 332 aa9.04□□□□□ -0.96
SPTLC3-206ENST00000485952 GPCPD1Q9NPB8 672 aa9.04□□□□□ -0.96
SPTLC3-206ENST00000485952 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
SPTLC3-206ENST00000485952 PXYLP1Q8TE99 480 aa9.03□□□□□ -0.96
SPTLC3-206ENST00000485952 ST18O60284 1047 aa9.02□□□□□ -0.97
SPTLC3-206ENST00000485952 PACS2Q86VP3 889 aa9.02□□□□□ -0.97
SPTLC3-206ENST00000485952 PHOX2BQ99453 314 aa9.02□□□□□ -0.97
SPTLC3-206ENST00000485952 FAM117AQ9C073 453 aa9.02□□□□□ -0.97
SPTLC3-206ENST00000485952 NBPF26B4DH59 902 aa9.01□□□□□ -0.97
SPTLC3-206ENST00000485952 EMP3P54852 163 aa9.01□□□□□ -0.97
SPTLC3-206ENST00000485952 VARS2Q5ST30 1063 aaKnown RBP9.01□□□□□ -0.97
SPTLC3-206ENST00000485952 TRIM6-TRIM34B2RNG4 842 aa9□□□□□ -0.97
SPTLC3-206ENST00000485952 TSKSQ9UJT2 592 aa9□□□□□ -0.97
SPTLC3-206ENST00000485952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.99□□□□□ -0.97
SPTLC3-206ENST00000485952 ONECUT3O60422 494 aaPredicted RBP8.99□□□□□ -0.97
SPTLC3-206ENST00000485952 TMUB1Q9BVT8 246 aa8.99□□□□□ -0.97
SPTLC3-206ENST00000485952 ARHGAP33O14559 1287 aa8.98□□□□□ -0.97
SPTLC3-206ENST00000485952 NUDT18Q6ZVK8 323 aa8.98□□□□□ -0.97
SPTLC3-206ENST00000485952 REPIN1Q9BWE0 567 aaKnown RBP8.98□□□□□ -0.97
SPTLC3-206ENST00000485952 FAM198AQ9UFP1 575 aa8.98□□□□□ -0.97
SPTLC3-206ENST00000485952 MS4A1P11836 297 aa8.97□□□□□ -0.97
SPTLC3-206ENST00000485952 SSTR3P32745 418 aaPredicted RBP8.97□□□□□ -0.97
SPTLC3-206ENST00000485952 PBX2P40425 430 aa8.97□□□□□ -0.97
SPTLC3-206ENST00000485952 MARVELD3Q96A59 401 aa8.97□□□□□ -0.97
SPTLC3-206ENST00000485952 PNMA3Q9UL41 463 aa8.97□□□□□ -0.97
SPTLC3-206ENST00000485952 PLEKHG3A1L390 1219 aa8.96□□□□□ -0.98
SPTLC3-206ENST00000485952 NLRP7Q8WX94 980 aa8.96□□□□□ -0.98
SPTLC3-206ENST00000485952 TATDN2Q93075 761 aa8.96□□□□□ -0.98
SPTLC3-206ENST00000485952 FAM163AQ96GL9 167 aaPredicted RBP8.96□□□□□ -0.98
SPTLC3-206ENST00000485952 EYA1Q99502 592 aa8.96□□□□□ -0.98
SPTLC3-206ENST00000485952 RCCD1A6NED2 376 aa8.95□□□□□ -0.98
SPTLC3-206ENST00000485952 FAM205CA6NFA0 338 aa8.95□□□□□ -0.98
SPTLC3-206ENST00000485952 PSEN2P49810 448 aa8.95□□□□□ -0.98
SPTLC3-206ENST00000485952 PROX2Q3B8N5 592 aa8.95□□□□□ -0.98
SPTLC3-206ENST00000485952 ZBED2Q9BTP6 218 aa8.95□□□□□ -0.98
SPTLC3-206ENST00000485952 FAM217BQ9NTX9 383 aaPredicted RBP8.95□□□□□ -0.98
SPTLC3-206ENST00000485952 DNAJB2P25686 324 aa8.94□□□□□ -0.98
SPTLC3-206ENST00000485952 ZNF687Q8N1G0 1237 aa8.93□□□□□ -0.98
SPTLC3-206ENST00000485952 BEGAINQ9BUH8 593 aa8.93□□□□□ -0.98
SPTLC3-206ENST00000485952 SLC4A5Q9BY07 1137 aa8.93□□□□□ -0.98
SPTLC3-206ENST00000485952 GOPCQ9HD26 462 aa8.93□□□□□ -0.98
SPTLC3-206ENST00000485952 KIAA1468Q9P260 1216 aa8.93□□□□□ -0.98
SPTLC3-206ENST00000485952 ARXQ96QS3 562 aa8.92□□□□□ -0.98
SPTLC3-206ENST00000485952 RSPH6AQ9H0K4 717 aa8.92□□□□□ -0.98
SPTLC3-206ENST00000485952 RABGEF1Q9UJ41 708 aa8.92□□□□□ -0.98
SPTLC3-206ENST00000485952 SULF1Q8IWU6 871 aa8.91□□□□□ -0.98
SPTLC3-206ENST00000485952 AXIN2Q9Y2T1 843 aa8.91□□□□□ -0.98
SPTLC3-206ENST00000485952 SMAPO00193 183 aa8.9□□□□□ -0.98
SPTLC3-206ENST00000485952 TMEM134Q9H6X4 195 aa8.9□□□□□ -0.98
SPTLC3-206ENST00000485952 C3orf80F5H4A9 247 aa8.89□□□□□ -0.99
SPTLC3-206ENST00000485952 HDGFP51858 240 aaKnown RBP8.89□□□□□ -0.99
SPTLC3-206ENST00000485952 DIXDC1Q155Q3 683 aa8.89□□□□□ -0.99
SPTLC3-206ENST00000485952 DMRTA1Q5VZB9 504 aa8.89□□□□□ -0.99
SPTLC3-206ENST00000485952 POTEEQ6S8J3 1075 aa8.89□□□□□ -0.99
SPTLC3-206ENST00000485952 HS3ST6Q96QI5 342 aa8.89□□□□□ -0.99
SPTLC3-206ENST00000485952 SH3D19Q5HYK7 790 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 278.7 ms