RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 PHF14O94880 888 aa7.97□□□□□ -1.13
PRPF38B-205ENST00000485810 TYW1BQ6NUM6 668 aa7.97□□□□□ -1.13
PRPF38B-205ENST00000485810 NBPF3Q9H094 633 aa7.97□□□□□ -1.13
PRPF38B-205ENST00000485810 RGS20O76081 388 aa7.97□□□□□ -1.13
PRPF38B-205ENST00000485810 BCAMP50895 628 aa7.96□□□□□ -1.14
PRPF38B-205ENST00000485810 FBXW7Q969H0 707 aa7.95□□□□□ -1.14
PRPF38B-205ENST00000485810 KIAA1468Q9P260 1216 aa7.95□□□□□ -1.14
PRPF38B-205ENST00000485810 DPYSL4O14531 572 aa7.94□□□□□ -1.14
PRPF38B-205ENST00000485810 AMER1Q5JTC6 1135 aaPredicted RBP7.94□□□□□ -1.14
PRPF38B-205ENST00000485810 C6orf132Q5T0Z8 1188 aa7.94□□□□□ -1.14
PRPF38B-205ENST00000485810 SOWAHBA6NEL2 793 aa7.93□□□□□ -1.14
PRPF38B-205ENST00000485810 ITGBL1O95965 494 aaPredicted RBP7.93□□□□□ -1.14
PRPF38B-205ENST00000485810 ANKK1Q8NFD2 765 aa7.92□□□□□ -1.14
PRPF38B-205ENST00000485810 ONECUT3O60422 494 aaPredicted RBP7.91□□□□□ -1.14
PRPF38B-205ENST00000485810 LAPTM4BQ86VI4 370 aa7.91□□□□□ -1.14
PRPF38B-205ENST00000485810 ZFRQ96KR1 1074 aaKnown RBP7.91□□□□□ -1.14
PRPF38B-205ENST00000485810 EPAS1Q99814 870 aa7.91□□□□□ -1.14
PRPF38B-205ENST00000485810 SEPT9Q9UHD8 586 aaPredicted RBP7.91□□□□□ -1.14
PRPF38B-205ENST00000485810 WBP1LQ9NX94 342 aa7.9□□□□□ -1.14
PRPF38B-205ENST00000485810 TRIM6-TRIM34B2RNG4 842 aa7.89□□□□□ -1.15
PRPF38B-205ENST00000485810 RBM33Q96EV2 1170 aaKnown RBP7.89□□□□□ -1.15
PRPF38B-205ENST00000485810 DDX12PQ92771 950 aa7.88□□□□□ -1.15
PRPF38B-205ENST00000485810 IRX2Q9BZI1 471 aaPredicted RBP7.87□□□□□ -1.15
PRPF38B-205ENST00000485810 PRIM1P49642 420 aaKnown RBP7.86□□□□□ -1.15
PRPF38B-205ENST00000485810 TSKSQ9UJT2 592 aa7.86□□□□□ -1.15
PRPF38B-205ENST00000485810 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
PRPF38B-205ENST00000485810 TSR1Q2NL82 804 aaKnown RBP7.85□□□□□ -1.15
PRPF38B-205ENST00000485810 FAM98CQ17RN3 349 aaKnown RBP7.84□□□□□ -1.15
PRPF38B-205ENST00000485810 FAM198AQ9UFP1 575 aa7.84□□□□□ -1.15
PRPF38B-205ENST00000485810 EN1Q05925 392 aaPredicted RBP7.83□□□□□ -1.16
PRPF38B-205ENST00000485810 PDIA6Q15084 440 aa7.83□□□□□ -1.16
PRPF38B-205ENST00000485810 NYAP1Q6ZVC0 841 aa7.82□□□□□ -1.16
PRPF38B-205ENST00000485810 BBXQ8WY36 941 aaPredicted RBP7.81□□□□□ -1.16
PRPF38B-205ENST00000485810 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.81□□□□□ -1.16
PRPF38B-205ENST00000485810 TSR3Q9UJK0 312 aaKnown RBP7.81□□□□□ -1.16
PRPF38B-205ENST00000485810 HPS5Q9UPZ3 1129 aa7.81□□□□□ -1.16
PRPF38B-205ENST00000485810 KCNC4Q03721 635 aa7.8□□□□□ -1.16
PRPF38B-205ENST00000485810 NBR1Q14596 966 aa7.8□□□□□ -1.16
PRPF38B-205ENST00000485810 SMAPO00193 183 aa7.79□□□□□ -1.16
PRPF38B-205ENST00000485810 LCE2BO14633 110 aa7.78□□□□□ -1.16
PRPF38B-205ENST00000485810 MAP3K7O43318 606 aa7.78□□□□□ -1.16
PRPF38B-205ENST00000485810 LRCH3Q96II8 777 aa7.78□□□□□ -1.16
PRPF38B-205ENST00000485810 TJAP1Q5JTD0 557 aa7.77□□□□□ -1.17
PRPF38B-205ENST00000485810 SPDYE16A6NNV3 312 aaPredicted RBP7.76□□□□□ -1.17
PRPF38B-205ENST00000485810 PACS2Q86VP3 889 aa7.76□□□□□ -1.17
PRPF38B-205ENST00000485810 CDCA7LQ96GN5 454 aa7.76□□□□□ -1.17
PRPF38B-205ENST00000485810 PRSS12P56730 875 aa7.75□□□□□ -1.17
PRPF38B-205ENST00000485810 SAMD7Q7Z3H4 446 aa7.75□□□□□ -1.17
PRPF38B-205ENST00000485810 ARIH1Q9Y4X5 557 aaPredicted RBP7.75□□□□□ -1.17
PRPF38B-205ENST00000485810 OSBPP22059 807 aa7.73□□□□□ -1.17
PRPF38B-205ENST00000485810 CFAP44Q96MT7 982 aa7.73□□□□□ -1.17
PRPF38B-205ENST00000485810 CDHR5Q9HBB8 845 aa7.73□□□□□ -1.17
PRPF38B-205ENST00000485810 PPP4CP60510 307 aa7.72□□□□□ -1.17
PRPF38B-205ENST00000485810 E2F4Q16254 413 aa7.72□□□□□ -1.17
PRPF38B-205ENST00000485810 TATDN2Q93075 761 aa7.72□□□□□ -1.17
PRPF38B-205ENST00000485810 GRXCR2A6NFK2 248 aa7.71□□□□□ -1.17
PRPF38B-205ENST00000485810 PAXIP1Q6ZW49 1069 aaPredicted RBP7.71□□□□□ -1.17
PRPF38B-205ENST00000485810 SPRYD3Q8NCJ5 442 aa7.71□□□□□ -1.17
PRPF38B-205ENST00000485810 ZNF516Q92618 1163 aa7.71□□□□□ -1.18
PRPF38B-205ENST00000485810 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.71□□□□□ -1.18
PRPF38B-205ENST00000485810 Q6ZNB5 142 aa7.7□□□□□ -1.18
PRPF38B-205ENST00000485810 TTC13Q8NBP0 860 aa7.7□□□□□ -1.18
PRPF38B-205ENST00000485810 MTRQ99707 1265 aa7.7□□□□□ -1.18
PRPF38B-205ENST00000485810 NPDC1Q9NQX5 325 aaPredicted RBP7.7□□□□□ -1.18
PRPF38B-205ENST00000485810 PNMA3Q9UL41 463 aa7.7□□□□□ -1.18
PRPF38B-205ENST00000485810 APLP1P51693 650 aa7.68□□□□□ -1.18
PRPF38B-205ENST00000485810 NUDT18Q6ZVK8 323 aa7.68□□□□□ -1.18
PRPF38B-205ENST00000485810 CERKQ8TCT0 537 aa7.67□□□□□ -1.18
PRPF38B-205ENST00000485810 NISCHQ9Y2I1 1504 aa7.67□□□□□ -1.18
PRPF38B-205ENST00000485810 NBPF26B4DH59 902 aa7.66□□□□□ -1.18
PRPF38B-205ENST00000485810 LAPTM4AQ15012 233 aa7.66□□□□□ -1.18
PRPF38B-205ENST00000485810 PPP1R18Q6NYC8 613 aa7.66□□□□□ -1.18
PRPF38B-205ENST00000485810 NKX2-3Q8TAU0 364 aa7.66□□□□□ -1.18
PRPF38B-205ENST00000485810 PRKD2Q9BZL6 878 aa7.66□□□□□ -1.18
PRPF38B-205ENST00000485810 IL21Q9HBE4 155 aa7.66□□□□□ -1.18
PRPF38B-205ENST00000485810 GFRA3O60609 400 aa7.64□□□□□ -1.19
PRPF38B-205ENST00000485810 RBM27Q9P2N5 1060 aaKnown RBP7.64□□□□□ -1.19
PRPF38B-205ENST00000485810 PADI6Q6TGC4 694 aa7.63□□□□□ -1.19
PRPF38B-205ENST00000485810 SWT1Q5T5J6 900 aaKnown RBP7.62□□□□□ -1.19
PRPF38B-205ENST00000485810 TRAF7Q6Q0C0 670 aa7.61□□□□□ -1.19
PRPF38B-205ENST00000485810 EYA1Q99502 592 aa7.61□□□□□ -1.19
PRPF38B-205ENST00000485810 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.61□□□□□ -1.19
PRPF38B-205ENST00000485810 WDR70Q9NW82 654 aa7.6□□□□□ -1.19
PRPF38B-205ENST00000485810 V9GY48 417 aaPredicted RBP7.6□□□□□ -1.19
PRPF38B-205ENST00000485810 NRG2O14511 850 aaPredicted RBP7.59□□□□□ -1.2
PRPF38B-205ENST00000485810 RNF40O75150 1001 aa7.59□□□□□ -1.2
PRPF38B-205ENST00000485810 MLLT3P42568 568 aaPredicted RBP7.59□□□□□ -1.2
PRPF38B-205ENST00000485810 EMID1Q96A84 441 aaPredicted RBP7.59□□□□□ -1.2
PRPF38B-205ENST00000485810 COPS2P61201 443 aa7.58□□□□□ -1.2
PRPF38B-205ENST00000485810 TSHZ2Q9NRE2 1034 aa7.58□□□□□ -1.2
PRPF38B-205ENST00000485810 HDGFP51858 240 aaKnown RBP7.55□□□□□ -1.2
PRPF38B-205ENST00000485810 ZPR1O75312 459 aa7.54□□□□□ -1.2
PRPF38B-205ENST00000485810 SLF2Q8IX21 1173 aa7.54□□□□□ -1.2
PRPF38B-205ENST00000485810 TRIM67Q6ZTA4 783 aa7.53□□□□□ -1.2
PRPF38B-205ENST00000485810 PDZRN3Q9UPQ7 1066 aa7.52□□□□□ -1.21
PRPF38B-205ENST00000485810 BLOC1S3Q6QNY0 202 aa7.51□□□□□ -1.21
PRPF38B-205ENST00000485810 TMUB1Q9BVT8 246 aa7.51□□□□□ -1.21
PRPF38B-205ENST00000485810 RNF223E7ERA6 249 aa7.5□□□□□ -1.21
PRPF38B-205ENST00000485810 PTGDRQ13258 359 aa7.5□□□□□ -1.21
PRPF38B-205ENST00000485810 FAM161AQ3B820 660 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms