RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 NBR1Q14596 966 aa8.15□□□□□ -1.1
RTN4-213ENST00000485749 ERICH6Q7L0X2 663 aa8.15□□□□□ -1.1
RTN4-213ENST00000485749 TTBK1Q5TCY1 1321 aaPredicted RBP8.14□□□□□ -1.11
RTN4-213ENST00000485749 FBXW7Q969H0 707 aa8.14□□□□□ -1.11
RTN4-213ENST00000485749 ZBED2Q9BTP6 218 aa8.14□□□□□ -1.11
RTN4-213ENST00000485749 PTPN5P54829 565 aa8.12□□□□□ -1.11
RTN4-213ENST00000485749 WNT2BQ93097 391 aa8.12□□□□□ -1.11
RTN4-213ENST00000485749 PPP1R3GB7ZBB8 358 aa8.11□□□□□ -1.11
RTN4-213ENST00000485749 BHMG1C9JSJ3 638 aaPredicted RBP8.11□□□□□ -1.11
RTN4-213ENST00000485749 RGS20O76081 388 aa8.11□□□□□ -1.11
RTN4-213ENST00000485749 MYT1Q01538 1121 aa8.11□□□□□ -1.11
RTN4-213ENST00000485749 PHF14O94880 888 aa8.1□□□□□ -1.11
RTN4-213ENST00000485749 IFFO2Q5TF58 517 aa8.1□□□□□ -1.11
RTN4-213ENST00000485749 TYW1BQ6NUM6 668 aa8.1□□□□□ -1.11
RTN4-213ENST00000485749 THSD4Q6ZMP0 1018 aa8.1□□□□□ -1.11
RTN4-213ENST00000485749 ADAM33Q9BZ11 813 aa8.1□□□□□ -1.11
RTN4-213ENST00000485749 EPAS1Q99814 870 aa8.08□□□□□ -1.12
RTN4-213ENST00000485749 RABGEF1Q9UJ41 708 aa8.08□□□□□ -1.12
RTN4-213ENST00000485749 ANKK1Q8NFD2 765 aa8.07□□□□□ -1.12
RTN4-213ENST00000485749 ONECUT3O60422 494 aaPredicted RBP8.06□□□□□ -1.12
RTN4-213ENST00000485749 LAPTM4BQ86VI4 370 aa8.06□□□□□ -1.12
RTN4-213ENST00000485749 NYAP1Q6ZVC0 841 aa8.05□□□□□ -1.12
RTN4-213ENST00000485749 EMILIN3Q9NT22 766 aa8.05□□□□□ -1.12
RTN4-213ENST00000485749 PCDHGA10Q9Y5H3 936 aa8.05□□□□□ -1.12
RTN4-213ENST00000485749 CAMK2BQ13554 666 aa8.03□□□□□ -1.12
RTN4-213ENST00000485749 GTF3C3Q9Y5Q9 886 aa8.03□□□□□ -1.12
RTN4-213ENST00000485749 TIMELESSQ9UNS1 1208 aa8.01□□□□□ -1.13
RTN4-213ENST00000485749 ARXQ96QS3 562 aa8□□□□□ -1.13
RTN4-213ENST00000485749 A0A0G2JS52 829 aa7.99□□□□□ -1.13
RTN4-213ENST00000485749 TULP1O00294 542 aaPredicted RBP7.99□□□□□ -1.13
RTN4-213ENST00000485749 C6orf132Q5T0Z8 1188 aa7.99□□□□□ -1.13
RTN4-213ENST00000485749 DPYSL4O14531 572 aa7.98□□□□□ -1.13
RTN4-213ENST00000485749 PROX2Q3B8N5 592 aa7.98□□□□□ -1.13
RTN4-213ENST00000485749 CADPS2Q86UW7 1296 aa7.98□□□□□ -1.13
RTN4-213ENST00000485749 SOWAHBA6NEL2 793 aa7.97□□□□□ -1.13
RTN4-213ENST00000485749 SPDYE16A6NNV3 312 aaPredicted RBP7.97□□□□□ -1.13
RTN4-213ENST00000485749 COL9A1P20849 921 aa7.97□□□□□ -1.13
RTN4-213ENST00000485749 KIAA1468Q9P260 1216 aa7.97□□□□□ -1.13
RTN4-213ENST00000485749 TRIM6-TRIM34B2RNG4 842 aa7.96□□□□□ -1.14
RTN4-213ENST00000485749 TMEM132AQ24JP5 1023 aa7.96□□□□□ -1.14
RTN4-213ENST00000485749 ZFRQ96KR1 1074 aaKnown RBP7.96□□□□□ -1.14
RTN4-213ENST00000485749 ITGBL1O95965 494 aaPredicted RBP7.95□□□□□ -1.14
RTN4-213ENST00000485749 FAM98CQ17RN3 349 aaKnown RBP7.95□□□□□ -1.14
RTN4-213ENST00000485749 PACS2Q86VP3 889 aa7.95□□□□□ -1.14
RTN4-213ENST00000485749 IRX2Q9BZI1 471 aaPredicted RBP7.95□□□□□ -1.14
RTN4-213ENST00000485749 CERKQ8TCT0 537 aa7.94□□□□□ -1.14
RTN4-213ENST00000485749 MAP3K7O43318 606 aa7.93□□□□□ -1.14
RTN4-213ENST00000485749 LRCH3Q96II8 777 aa7.93□□□□□ -1.14
RTN4-213ENST00000485749 WDR70Q9NW82 654 aa7.93□□□□□ -1.14
RTN4-213ENST00000485749 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.93□□□□□ -1.14
RTN4-213ENST00000485749 BCAMP50895 628 aa7.92□□□□□ -1.14
RTN4-213ENST00000485749 EN1Q05925 392 aaPredicted RBP7.92□□□□□ -1.14
RTN4-213ENST00000485749 PDIA6Q15084 440 aa7.92□□□□□ -1.14
RTN4-213ENST00000485749 DDX12PQ92771 950 aa7.92□□□□□ -1.14
RTN4-213ENST00000485749 RBM33Q96EV2 1170 aaKnown RBP7.92□□□□□ -1.14
RTN4-213ENST00000485749 KCNC4Q03721 635 aa7.91□□□□□ -1.14
RTN4-213ENST00000485749 TSR3Q9UJK0 312 aaKnown RBP7.91□□□□□ -1.14
RTN4-213ENST00000485749 SEPT9Q9UHD8 586 aaPredicted RBP7.9□□□□□ -1.14
RTN4-213ENST00000485749 RANGAP1P46060 587 aaPredicted RBP7.89□□□□□ -1.15
RTN4-213ENST00000485749 E2F4Q16254 413 aa7.89□□□□□ -1.15
RTN4-213ENST00000485749 HDGFP51858 240 aaKnown RBP7.88□□□□□ -1.15
RTN4-213ENST00000485749 NECTIN2Q92692 538 aa7.88□□□□□ -1.15
RTN4-213ENST00000485749 WBP1LQ9NX94 342 aa7.88□□□□□ -1.15
RTN4-213ENST00000485749 HPS5Q9UPZ3 1129 aa7.87□□□□□ -1.15
RTN4-213ENST00000485749 NBPF26B4DH59 902 aa7.86□□□□□ -1.15
RTN4-213ENST00000485749 PPP4CP60510 307 aa7.86□□□□□ -1.15
RTN4-213ENST00000485749 ARIH1Q9Y4X5 557 aaPredicted RBP7.86□□□□□ -1.15
RTN4-213ENST00000485749 P3H3Q8IVL6 736 aa7.85□□□□□ -1.15
RTN4-213ENST00000485749 PRSS12P56730 875 aa7.84□□□□□ -1.15
RTN4-213ENST00000485749 CDCA7LQ96GN5 454 aa7.84□□□□□ -1.15
RTN4-213ENST00000485749 SLC4A3P48751 1232 aa7.83□□□□□ -1.16
RTN4-213ENST00000485749 LAPTM4AQ15012 233 aa7.83□□□□□ -1.16
RTN4-213ENST00000485749 TSR1Q2NL82 804 aaKnown RBP7.83□□□□□ -1.16
RTN4-213ENST00000485749 RBM27Q9P2N5 1060 aaKnown RBP7.83□□□□□ -1.16
RTN4-213ENST00000485749 TSKSQ9UJT2 592 aa7.83□□□□□ -1.16
RTN4-213ENST00000485749 GRXCR2A6NFK2 248 aa7.81□□□□□ -1.16
RTN4-213ENST00000485749 PNMA3Q9UL41 463 aa7.8□□□□□ -1.16
RTN4-213ENST00000485749 SAMD7Q7Z3H4 446 aa7.79□□□□□ -1.16
RTN4-213ENST00000485749 HOMEZQ8IX15 550 aa7.79□□□□□ -1.16
RTN4-213ENST00000485749 TATDN2Q93075 761 aa7.79□□□□□ -1.16
RTN4-213ENST00000485749 Q6ZNB5 142 aa7.77□□□□□ -1.17
RTN4-213ENST00000485749 IL21Q9HBE4 155 aa7.77□□□□□ -1.17
RTN4-213ENST00000485749 C14orf37Q86TY3 774 aa7.76□□□□□ -1.17
RTN4-213ENST00000485749 RNF40O75150 1001 aa7.75□□□□□ -1.17
RTN4-213ENST00000485749 SLF2Q8IX21 1173 aa7.75□□□□□ -1.17
RTN4-213ENST00000485749 PRR14Q9BWN1 585 aa7.75□□□□□ -1.17
RTN4-213ENST00000485749 SMAPO00193 183 aa7.74□□□□□ -1.17
RTN4-213ENST00000485749 GGCXP38435 758 aa7.74□□□□□ -1.17
RTN4-213ENST00000485749 NUDT18Q6ZVK8 323 aa7.74□□□□□ -1.17
RTN4-213ENST00000485749 OSBPP22059 807 aa7.73□□□□□ -1.17
RTN4-213ENST00000485749 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.73□□□□□ -1.17
RTN4-213ENST00000485749 TJAP1Q5JTD0 557 aa7.72□□□□□ -1.17
RTN4-213ENST00000485749 MTRQ99707 1265 aa7.72□□□□□ -1.17
RTN4-213ENST00000485749 LMOD2Q6P5Q4 547 aa7.71□□□□□ -1.18
RTN4-213ENST00000485749 V9GY48 417 aaPredicted RBP7.71□□□□□ -1.18
RTN4-213ENST00000485749 FAM198AQ9UFP1 575 aa7.7□□□□□ -1.18
RTN4-213ENST00000485749 ARHGEF1Q92888 912 aaKnown RBP7.69□□□□□ -1.18
RTN4-213ENST00000485749 GFRA3O60609 400 aa7.68□□□□□ -1.18
RTN4-213ENST00000485749 PRKD2Q9BZL6 878 aa7.68□□□□□ -1.18
RTN4-213ENST00000485749 CDHR5Q9HBB8 845 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms