RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 KDM2AQ9Y2K7 1162 aa8.71□□□□□ -1.02
SFPQ-209ENST00000485454 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.02
SFPQ-209ENST00000485454 KCTD12Q96CX2 325 aaKnown RBP8.7□□□□□ -1.02
SFPQ-209ENST00000485454 VPS9D1Q9Y2B5 631 aa8.7□□□□□ -1.02
SFPQ-209ENST00000485454 TYW1BQ6NUM6 668 aa8.69□□□□□ -1.02
SFPQ-209ENST00000485454 DDX12PQ92771 950 aa8.69□□□□□ -1.02
SFPQ-209ENST00000485454 EPAS1Q99814 870 aa8.69□□□□□ -1.02
SFPQ-209ENST00000485454 PLA2G2EQ9NZK7 142 aa8.69□□□□□ -1.02
SFPQ-209ENST00000485454 FBXW7Q969H0 707 aa8.68□□□□□ -1.02
SFPQ-209ENST00000485454 ADAM33Q9BZ11 813 aa8.68□□□□□ -1.02
SFPQ-209ENST00000485454 SLC4A5Q9BY07 1137 aa8.67□□□□□ -1.02
SFPQ-209ENST00000485454 NBR1Q14596 966 aa8.65□□□□□ -1.02
SFPQ-209ENST00000485454 ZBED2Q9BTP6 218 aa8.65□□□□□ -1.02
SFPQ-209ENST00000485454 GRXCR2A6NFK2 248 aa8.64□□□□□ -1.03
SFPQ-209ENST00000485454 GOLGA8CPA6NN73 597 aa8.62□□□□□ -1.03
SFPQ-209ENST00000485454 BHMG1C9JSJ3 638 aaPredicted RBP8.62□□□□□ -1.03
SFPQ-209ENST00000485454 PTPN5P54829 565 aa8.62□□□□□ -1.03
SFPQ-209ENST00000485454 EN1Q05925 392 aaPredicted RBP8.62□□□□□ -1.03
SFPQ-209ENST00000485454 MRPL50Q8N5N7 158 aaKnown RBP8.62□□□□□ -1.03
SFPQ-209ENST00000485454 RBM33Q96EV2 1170 aaKnown RBP8.62□□□□□ -1.03
SFPQ-209ENST00000485454 C6orf132Q5T0Z8 1188 aa8.61□□□□□ -1.03
SFPQ-209ENST00000485454 NBPF3Q9H094 633 aa8.61□□□□□ -1.03
SFPQ-209ENST00000485454 PPP1R3GB7ZBB8 358 aa8.6□□□□□ -1.03
SFPQ-209ENST00000485454 MAP3K7O43318 606 aa8.59□□□□□ -1.03
SFPQ-209ENST00000485454 OSBPP22059 807 aa8.59□□□□□ -1.03
SFPQ-209ENST00000485454 COL9A1P20849 921 aa8.58□□□□□ -1.04
SFPQ-209ENST00000485454 MLLT3P42568 568 aaPredicted RBP8.58□□□□□ -1.04
SFPQ-209ENST00000485454 THSD4Q6ZMP0 1018 aa8.58□□□□□ -1.04
SFPQ-209ENST00000485454 WNT2BQ93097 391 aa8.58□□□□□ -1.04
SFPQ-209ENST00000485454 SEMA3EO15041 775 aa8.57□□□□□ -1.04
SFPQ-209ENST00000485454 PRIM1P49642 420 aaKnown RBP8.57□□□□□ -1.04
SFPQ-209ENST00000485454 TSR1Q2NL82 804 aaKnown RBP8.57□□□□□ -1.04
SFPQ-209ENST00000485454 PROX2Q3B8N5 592 aa8.55□□□□□ -1.04
SFPQ-209ENST00000485454 RABGEF1Q9UJ41 708 aa8.55□□□□□ -1.04
SFPQ-209ENST00000485454 TESPA1A2RU30 521 aaPredicted RBP8.52□□□□□ -1.05
SFPQ-209ENST00000485454 ONECUT3O60422 494 aaPredicted RBP8.52□□□□□ -1.05
SFPQ-209ENST00000485454 CERKQ8TCT0 537 aa8.52□□□□□ -1.05
SFPQ-209ENST00000485454 SMYD5Q6GMV2 418 aa8.51□□□□□ -1.05
SFPQ-209ENST00000485454 ANKK1Q8NFD2 765 aa8.51□□□□□ -1.05
SFPQ-209ENST00000485454 CDHR5Q9HBB8 845 aa8.51□□□□□ -1.05
SFPQ-209ENST00000485454 TRIM6-TRIM34B2RNG4 842 aa8.5□□□□□ -1.05
SFPQ-209ENST00000485454 PRSS12P56730 875 aa8.48□□□□□ -1.05
SFPQ-209ENST00000485454 LAPTM4BQ86VI4 370 aa8.48□□□□□ -1.05
SFPQ-209ENST00000485454 KIAA1468Q9P260 1216 aa8.48□□□□□ -1.05
SFPQ-209ENST00000485454 CDCA7LQ96GN5 454 aa8.47□□□□□ -1.05
SFPQ-209ENST00000485454 NPDC1Q9NQX5 325 aaPredicted RBP8.47□□□□□ -1.05
SFPQ-209ENST00000485454 IFFO2Q5TF58 517 aa8.46□□□□□ -1.06
SFPQ-209ENST00000485454 ZFRQ96KR1 1074 aaKnown RBP8.46□□□□□ -1.06
SFPQ-209ENST00000485454 TSKSQ9UJT2 592 aa8.46□□□□□ -1.06
SFPQ-209ENST00000485454 NUTM2FA1L443 756 aa8.45□□□□□ -1.06
SFPQ-209ENST00000485454 BCAMP50895 628 aa8.45□□□□□ -1.06
SFPQ-209ENST00000485454 PACS2Q86VP3 889 aa8.45□□□□□ -1.06
SFPQ-209ENST00000485454 RBM27Q9P2N5 1060 aaKnown RBP8.45□□□□□ -1.06
SFPQ-209ENST00000485454 SEPT9Q9UHD8 586 aaPredicted RBP8.45□□□□□ -1.06
SFPQ-209ENST00000485454 SOWAHBA6NEL2 793 aa8.44□□□□□ -1.06
SFPQ-209ENST00000485454 PTGDRQ13258 359 aa8.43□□□□□ -1.06
SFPQ-209ENST00000485454 RBM26Q5T8P6 1007 aaKnown RBP8.43□□□□□ -1.06
SFPQ-209ENST00000485454 FAM198AQ9UFP1 575 aa8.43□□□□□ -1.06
SFPQ-209ENST00000485454 SLC24A1O60721 1099 aa8.42□□□□□ -1.06
SFPQ-209ENST00000485454 FAM98CQ17RN3 349 aaKnown RBP8.42□□□□□ -1.06
SFPQ-209ENST00000485454 PADI6Q6TGC4 694 aa8.42□□□□□ -1.06
SFPQ-209ENST00000485454 A0A0G2JS52 829 aa8.41□□□□□ -1.06
SFPQ-209ENST00000485454 TULP1O00294 542 aaPredicted RBP8.41□□□□□ -1.06
SFPQ-209ENST00000485454 TTC13Q8NBP0 860 aa8.41□□□□□ -1.06
SFPQ-209ENST00000485454 NBPF26B4DH59 902 aa8.4□□□□□ -1.06
SFPQ-209ENST00000485454 FCHSD2O94868 740 aa8.4□□□□□ -1.06
SFPQ-209ENST00000485454 NYAP1Q6ZVC0 841 aa8.4□□□□□ -1.06
SFPQ-209ENST00000485454 TATDN2Q93075 761 aa8.39□□□□□ -1.07
SFPQ-209ENST00000485454 WBP1LQ9NX94 342 aa8.39□□□□□ -1.07
SFPQ-209ENST00000485454 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
SFPQ-209ENST00000485454 SMAPO00193 183 aa8.38□□□□□ -1.07
SFPQ-209ENST00000485454 RGS20O76081 388 aa8.38□□□□□ -1.07
SFPQ-209ENST00000485454 ITGBL1O95965 494 aaPredicted RBP8.38□□□□□ -1.07
SFPQ-209ENST00000485454 LRCH3Q96II8 777 aa8.38□□□□□ -1.07
SFPQ-209ENST00000485454 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.38□□□□□ -1.07
SFPQ-209ENST00000485454 C3orf80F5H4A9 247 aa8.37□□□□□ -1.07
SFPQ-209ENST00000485454 HIC1Q14526 733 aa8.37□□□□□ -1.07
SFPQ-209ENST00000485454 NUDT18Q6ZVK8 323 aa8.37□□□□□ -1.07
SFPQ-209ENST00000485454 GPIHBP1Q8IV16 184 aa8.36□□□□□ -1.07
SFPQ-209ENST00000485454 HPS5Q9UPZ3 1129 aa8.36□□□□□ -1.07
SFPQ-209ENST00000485454 TSR3Q9UJK0 312 aaKnown RBP8.35□□□□□ -1.07
SFPQ-209ENST00000485454 GNPATO15228 680 aa8.34□□□□□ -1.07
SFPQ-209ENST00000485454 GPR37O15354 613 aa8.34□□□□□ -1.07
SFPQ-209ENST00000485454 KCNC4Q03721 635 aa8.33□□□□□ -1.08
SFPQ-209ENST00000485454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.33□□□□□ -1.08
SFPQ-209ENST00000485454 EYA1Q99502 592 aa8.32□□□□□ -1.08
SFPQ-209ENST00000485454 RBM46Q8TBY0 533 aaKnown RBP8.31□□□□□ -1.08
SFPQ-209ENST00000485454 ADGRG1Q9Y653 693 aa8.31□□□□□ -1.08
SFPQ-209ENST00000485454 FECHP22830 423 aa8.3□□□□□ -1.08
SFPQ-209ENST00000485454 HDGFP51858 240 aaKnown RBP8.3□□□□□ -1.08
SFPQ-209ENST00000485454 PPP4CP60510 307 aa8.3□□□□□ -1.08
SFPQ-209ENST00000485454 SAMD7Q7Z3H4 446 aa8.3□□□□□ -1.08
SFPQ-209ENST00000485454 IRX2Q9BZI1 471 aaPredicted RBP8.3□□□□□ -1.08
SFPQ-209ENST00000485454 FAM161AQ3B820 660 aa8.29□□□□□ -1.08
SFPQ-209ENST00000485454 LMOD2Q6P5Q4 547 aa8.29□□□□□ -1.08
SFPQ-209ENST00000485454 OATP04181 439 aa8.28□□□□□ -1.08
SFPQ-209ENST00000485454 DNAJB2P25686 324 aa8.27□□□□□ -1.09
SFPQ-209ENST00000485454 SWT1Q5T5J6 900 aaKnown RBP8.27□□□□□ -1.09
SFPQ-209ENST00000485454 RNF40O75150 1001 aa8.26□□□□□ -1.09
SFPQ-209ENST00000485454 PXYLP1Q8TE99 480 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms