RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-208ENST00000485365 PHF14O94880 888 aa12.4□□□□□ -0.42
SFPQ-208ENST00000485365 ANKK1Q8NFD2 765 aa12.4□□□□□ -0.42
SFPQ-208ENST00000485365 IRX2Q9BZI1 471 aaPredicted RBP12.38□□□□□ -0.43
SFPQ-208ENST00000485365 ITGBL1O95965 494 aaPredicted RBP12.37□□□□□ -0.43
SFPQ-208ENST00000485365 BCAMP50895 628 aa12.37□□□□□ -0.43
SFPQ-208ENST00000485365 LAPTM4BQ86VI4 370 aa12.36□□□□□ -0.43
SFPQ-208ENST00000485365 SOWAHBA6NEL2 793 aa12.34□□□□□ -0.43
SFPQ-208ENST00000485365 DCAF8L2P0C7V8 631 aa12.34□□□□□ -0.43
SFPQ-208ENST00000485365 CAMK2BQ13554 666 aa12.34□□□□□ -0.43
SFPQ-208ENST00000485365 KIAA1468Q9P260 1216 aa12.34□□□□□ -0.43
SFPQ-208ENST00000485365 C6orf132Q5T0Z8 1188 aa12.32□□□□□ -0.44
SFPQ-208ENST00000485365 ZFRQ96KR1 1074 aaKnown RBP12.32□□□□□ -0.44
SFPQ-208ENST00000485365 EPAS1Q99814 870 aa12.32□□□□□ -0.44
SFPQ-208ENST00000485365 ONECUT3O60422 494 aaPredicted RBP12.31□□□□□ -0.44
SFPQ-208ENST00000485365 DPYSL4O14531 572 aa12.3□□□□□ -0.44
SFPQ-208ENST00000485365 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
SFPQ-208ENST00000485365 NYAP1Q6ZVC0 841 aa12.28□□□□□ -0.44
SFPQ-208ENST00000485365 WBP1LQ9NX94 342 aa12.28□□□□□ -0.44
SFPQ-208ENST00000485365 TRIM6-TRIM34B2RNG4 842 aa12.27□□□□□ -0.45
SFPQ-208ENST00000485365 RBM33Q96EV2 1170 aaKnown RBP12.25□□□□□ -0.45
SFPQ-208ENST00000485365 FAM98CQ17RN3 349 aaKnown RBP12.24□□□□□ -0.45
SFPQ-208ENST00000485365 DDX12PQ92771 950 aa12.23□□□□□ -0.45
SFPQ-208ENST00000485365 KCNC4Q03721 635 aa12.21□□□□□ -0.45
SFPQ-208ENST00000485365 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.19□□□□□ -0.46
SFPQ-208ENST00000485365 TSR3Q9UJK0 312 aaKnown RBP12.19□□□□□ -0.46
SFPQ-208ENST00000485365 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
SFPQ-208ENST00000485365 LRCH3Q96II8 777 aa12.18□□□□□ -0.46
SFPQ-208ENST00000485365 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
SFPQ-208ENST00000485365 TSKSQ9UJT2 592 aa12.17□□□□□ -0.46
SFPQ-208ENST00000485365 NBR1Q14596 966 aa12.15□□□□□ -0.46
SFPQ-208ENST00000485365 TSR1Q2NL82 804 aaKnown RBP12.15□□□□□ -0.46
SFPQ-208ENST00000485365 PDIA6Q15084 440 aa12.14□□□□□ -0.47
SFPQ-208ENST00000485365 MAP3K7O43318 606 aa12.13□□□□□ -0.47
SFPQ-208ENST00000485365 PACS2Q86VP3 889 aa12.12□□□□□ -0.47
SFPQ-208ENST00000485365 Q6ZNB5 142 aa12.11□□□□□ -0.47
SFPQ-208ENST00000485365 SPDYE16A6NNV3 312 aaPredicted RBP12.07□□□□□ -0.48
SFPQ-208ENST00000485365 CDCA7LQ96GN5 454 aa12.07□□□□□ -0.48
SFPQ-208ENST00000485365 FAM198AQ9UFP1 575 aa12.07□□□□□ -0.48
SFPQ-208ENST00000485365 SMAPO00193 183 aa12.06□□□□□ -0.48
SFPQ-208ENST00000485365 PPP4CP60510 307 aa12.06□□□□□ -0.48
SFPQ-208ENST00000485365 BBXQ8WY36 941 aaPredicted RBP12.06□□□□□ -0.48
SFPQ-208ENST00000485365 PRIM1P49642 420 aaKnown RBP12.05□□□□□ -0.48
SFPQ-208ENST00000485365 PRSS12P56730 875 aa12.05□□□□□ -0.48
SFPQ-208ENST00000485365 TJAP1Q5JTD0 557 aa12.05□□□□□ -0.48
SFPQ-208ENST00000485365 SAMD7Q7Z3H4 446 aa12.05□□□□□ -0.48
SFPQ-208ENST00000485365 C3orf80F5H4A9 247 aa12.04□□□□□ -0.48
SFPQ-208ENST00000485365 LCE2BO14633 110 aa12□□□□□ -0.49
SFPQ-208ENST00000485365 LAPTM4AQ15012 233 aa12□□□□□ -0.49
SFPQ-208ENST00000485365 CERKQ8TCT0 537 aa12□□□□□ -0.49
SFPQ-208ENST00000485365 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
SFPQ-208ENST00000485365 TATDN2Q93075 761 aa11.99□□□□□ -0.49
SFPQ-208ENST00000485365 MTRQ99707 1265 aa11.99□□□□□ -0.49
SFPQ-208ENST00000485365 GRXCR2A6NFK2 248 aa11.98□□□□□ -0.49
SFPQ-208ENST00000485365 E2F4Q16254 413 aa11.98□□□□□ -0.49
SFPQ-208ENST00000485365 PNMA3Q9UL41 463 aa11.97□□□□□ -0.49
SFPQ-208ENST00000485365 ARIH1Q9Y4X5 557 aaPredicted RBP11.97□□□□□ -0.49
SFPQ-208ENST00000485365 GFRA3O60609 400 aa11.96□□□□□ -0.49
SFPQ-208ENST00000485365 CDHR5Q9HBB8 845 aa11.96□□□□□ -0.49
SFPQ-208ENST00000485365 IL21Q9HBE4 155 aa11.96□□□□□ -0.49
SFPQ-208ENST00000485365 PRKD2Q9BZL6 878 aa11.95□□□□□ -0.5
SFPQ-208ENST00000485365 SPRYD3Q8NCJ5 442 aa11.94□□□□□ -0.5
SFPQ-208ENST00000485365 OSBPP22059 807 aa11.93□□□□□ -0.5
SFPQ-208ENST00000485365 PPP1R18Q6NYC8 613 aa11.93□□□□□ -0.5
SFPQ-208ENST00000485365 ZNF516Q92618 1163 aa11.93□□□□□ -0.5
SFPQ-208ENST00000485365 NUDT18Q6ZVK8 323 aa11.92□□□□□ -0.5
SFPQ-208ENST00000485365 RBM27Q9P2N5 1060 aaKnown RBP11.92□□□□□ -0.5
SFPQ-208ENST00000485365 APLP1P51693 650 aa11.91□□□□□ -0.5
SFPQ-208ENST00000485365 TRAF7Q6Q0C0 670 aa11.91□□□□□ -0.5
SFPQ-208ENST00000485365 RNF40O75150 1001 aa11.9□□□□□ -0.5
SFPQ-208ENST00000485365 V9GY48 417 aaPredicted RBP11.89□□□□□ -0.51
SFPQ-208ENST00000485365 NRG2O14511 850 aaPredicted RBP11.88□□□□□ -0.51
SFPQ-208ENST00000485365 TTC13Q8NBP0 860 aa11.87□□□□□ -0.51
SFPQ-208ENST00000485365 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.87□□□□□ -0.51
SFPQ-208ENST00000485365 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
SFPQ-208ENST00000485365 WDR70Q9NW82 654 aa11.86□□□□□ -0.51
SFPQ-208ENST00000485365 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
SFPQ-208ENST00000485365 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.85□□□□□ -0.51
SFPQ-208ENST00000485365 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
SFPQ-208ENST00000485365 NPDC1Q9NQX5 325 aaPredicted RBP11.84□□□□□ -0.51
SFPQ-208ENST00000485365 SWT1Q5T5J6 900 aaKnown RBP11.83□□□□□ -0.52
SFPQ-208ENST00000485365 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
SFPQ-208ENST00000485365 COPS2P61201 443 aa11.8□□□□□ -0.52
SFPQ-208ENST00000485365 SLF2Q8IX21 1173 aa11.8□□□□□ -0.52
SFPQ-208ENST00000485365 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
SFPQ-208ENST00000485365 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
SFPQ-208ENST00000485365 PDZRN3Q9UPQ7 1066 aa11.77□□□□□ -0.53
SFPQ-208ENST00000485365 GGCXP38435 758 aa11.76□□□□□ -0.53
SFPQ-208ENST00000485365 EYA1Q99502 592 aa11.76□□□□□ -0.53
SFPQ-208ENST00000485365 ZPR1O75312 459 aa11.74□□□□□ -0.53
SFPQ-208ENST00000485365 TMUB1Q9BVT8 246 aa11.73□□□□□ -0.53
SFPQ-208ENST00000485365 SLC4A3P48751 1232 aa11.7□□□□□ -0.54
SFPQ-208ENST00000485365 PCDHB3Q9Y5E6 796 aa11.7□□□□□ -0.54
SFPQ-208ENST00000485365 PRR14Q9BWN1 585 aa11.69□□□□□ -0.54
SFPQ-208ENST00000485365 BLOC1S3Q6QNY0 202 aa11.68□□□□□ -0.54
SFPQ-208ENST00000485365 MLLT3P42568 568 aaPredicted RBP11.67□□□□□ -0.54
SFPQ-208ENST00000485365 TRIM67Q6ZTA4 783 aa11.67□□□□□ -0.54
SFPQ-208ENST00000485365 EMID1Q96A84 441 aaPredicted RBP11.67□□□□□ -0.54
SFPQ-208ENST00000485365 RNF223E7ERA6 249 aa11.66□□□□□ -0.54
SFPQ-208ENST00000485365 ZNF787Q6DD87 383 aa11.66□□□□□ -0.54
SFPQ-208ENST00000485365 TLL1O43897 1013 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms