RNA–Protein interactions for RNA: ENST00000485036.5

TNFRSF25-215, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-215ENST00000485036 PKD2Q13563 968 aa36.57■■■■□ 3.45
TNFRSF25-215ENST00000485036 DHX29Q7Z478 1369 aaKnown RBP36.54■■■■□ 3.44
TNFRSF25-215ENST00000485036 TEX14Q8IWB6 1497 aa36.54■■■■□ 3.44
TNFRSF25-215ENST00000485036 TSPOAP1O95153 1857 aa36.53■■■■□ 3.44
TNFRSF25-215ENST00000485036 PPP1R15AO75807 674 aaPredicted RBP36.51■■■■□ 3.43
TNFRSF25-215ENST00000485036 FRMPD1Q5SYB0 1578 aa36.5■■■■□ 3.43
TNFRSF25-215ENST00000485036 ABCA6Q8N139 1617 aa36.5■■■■□ 3.43
TNFRSF25-215ENST00000485036 ZNF316A6NFI3 1004 aaPredicted RBP36.48■■■■□ 3.43
TNFRSF25-215ENST00000485036 VWDEQ8N2E2 1590 aa36.46■■■■□ 3.43
TNFRSF25-215ENST00000485036 A2MP01023 1474 aa36.46■■■■□ 3.43
TNFRSF25-215ENST00000485036 BCORL1Q5H9F3 1711 aa36.46■■■■□ 3.43
TNFRSF25-215ENST00000485036 PRDM15P57071 1507 aaPredicted RBP36.46■■■■□ 3.43
TNFRSF25-215ENST00000485036 MROH1Q8NDA8 1641 aa36.45■■■■□ 3.43
TNFRSF25-215ENST00000485036 ZMYM4Q5VZL5 1548 aa36.44■■■■□ 3.42
TNFRSF25-215ENST00000485036 MYT1LQ9UL68 1186 aa36.44■■■■□ 3.42
TNFRSF25-215ENST00000485036 RNF17Q9BXT8 1623 aaKnown RBP36.43■■■■□ 3.42
TNFRSF25-215ENST00000485036 DIP2CQ9Y2E4 1556 aa36.42■■■■□ 3.42
TNFRSF25-215ENST00000485036 RAPGEF3O95398 923 aa36.41■■■■□ 3.42
TNFRSF25-215ENST00000485036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.4■■■■□ 3.42
TNFRSF25-215ENST00000485036 TET3O43151 1660 aa36.37■■■■□ 3.41
TNFRSF25-215ENST00000485036 ATP10AO60312 1499 aa36.34■■■■□ 3.41
TNFRSF25-215ENST00000485036 E9PCH4 1651 aa36.33■■■■□ 3.41
TNFRSF25-215ENST00000485036 KIF3BO15066 747 aa36.31■■■■□ 3.4
TNFRSF25-215ENST00000485036 KANK1Q14678 1352 aa36.3■■■■□ 3.4
TNFRSF25-215ENST00000485036 PLA2R1Q13018 1463 aa36.3■■■■□ 3.4
TNFRSF25-215ENST00000485036 L3MBTL2Q969R5 705 aa36.29■■■■□ 3.4
TNFRSF25-215ENST00000485036 LMTK2Q8IWU2 1503 aa36.26■■■■□ 3.4
TNFRSF25-215ENST00000485036 YEATS2Q9ULM3 1422 aa36.25■■■■□ 3.39
TNFRSF25-215ENST00000485036 SPHKAPQ2M3C7 1700 aa36.21■■■■□ 3.39
TNFRSF25-215ENST00000485036 CCDC144AA2RUR9 1427 aa36.21■■■■□ 3.39
TNFRSF25-215ENST00000485036 EFCAB6Q5THR3 1501 aa36.2■■■■□ 3.39
TNFRSF25-215ENST00000485036 CEP152O94986 1710 aa36.19■■■■□ 3.38
TNFRSF25-215ENST00000485036 REREQ9P2R6 1566 aa36.19■■■■□ 3.38
TNFRSF25-215ENST00000485036 TRPM2O94759 1503 aa36.18■■■■□ 3.38
TNFRSF25-215ENST00000485036 PTPRTO14522 1441 aa36.15■■■■□ 3.38
TNFRSF25-215ENST00000485036 COL17A1Q9UMD9 1497 aaPredicted RBP36.14■■■■□ 3.38
TNFRSF25-215ENST00000485036 TRHP20396 242 aaPredicted RBP36.1■■■■□ 3.37
TNFRSF25-215ENST00000485036 ZC3H13Q5T200 1668 aaKnown RBP36.09■■■■□ 3.37
TNFRSF25-215ENST00000485036 ABCC3O15438 1527 aa36.08■■■■□ 3.37
TNFRSF25-215ENST00000485036 ARHGEF40Q8TER5 1519 aa36.07■■■■□ 3.36
TNFRSF25-215ENST00000485036 DIEXFQ68CQ4 756 aaKnown RBP36.07■■■■□ 3.36
TNFRSF25-215ENST00000485036 UHRF1BP1Q6BDS2 1440 aa36.06■■■■□ 3.36
TNFRSF25-215ENST00000485036 AGLP35573 1532 aa36.04■■■■□ 3.36
TNFRSF25-215ENST00000485036 NBPF8Q3BBV2 869 aa36.03■■■■□ 3.36
TNFRSF25-215ENST00000485036 CLTCL1P53675 1640 aa36.03■■■■□ 3.36
TNFRSF25-215ENST00000485036 CAMSAP1Q5T5Y3 1602 aa36.03■■■■□ 3.36
TNFRSF25-215ENST00000485036 GGT6Q6P531 493 aa35.99■■■■□ 3.35
TNFRSF25-215ENST00000485036 NEURL4Q96JN8 1562 aa35.98■■■■□ 3.35
TNFRSF25-215ENST00000485036 SPATA31E1Q6ZUB1 1445 aa35.96■■■■□ 3.35
TNFRSF25-215ENST00000485036 NPATQ14207 1427 aa35.95■■■■□ 3.35
TNFRSF25-215ENST00000485036 SIGLEC1Q9BZZ2 1709 aa35.94■■■■□ 3.34
TNFRSF25-215ENST00000485036 RALGAPBQ86X10 1494 aa35.91■■■■□ 3.34
TNFRSF25-215ENST00000485036 WASHC2CQ9Y4E1 1318 aa35.9■■■■□ 3.34
TNFRSF25-215ENST00000485036 ARHGAP31Q2M1Z3 1444 aa35.9■■■■□ 3.34
TNFRSF25-215ENST00000485036 CNTLNQ9NXG0 1405 aa35.86■■■■□ 3.33
TNFRSF25-215ENST00000485036 KIF1BO60333 1816 aa35.85■■■■□ 3.33
TNFRSF25-215ENST00000485036 DCAF11Q8TEB1 546 aa35.85■■■■□ 3.33
TNFRSF25-215ENST00000485036 PRAG1Q86YV5 1406 aa35.84■■■■□ 3.33
TNFRSF25-215ENST00000485036 UGGT1Q9NYU2 1555 aa35.83■■■■□ 3.33
TNFRSF25-215ENST00000485036 TRPM1Q7Z4N2 1603 aa35.83■■■■□ 3.33
TNFRSF25-215ENST00000485036 NOS1P29475 1434 aa35.82■■■■□ 3.32
TNFRSF25-215ENST00000485036 EIF4G2P78344 907 aaKnown RBP eCLIP35.8■■■■□ 3.32
TNFRSF25-215ENST00000485036 RGL3Q3MIN7 710 aa35.8■■■■□ 3.32
TNFRSF25-215ENST00000485036 PPP6R1Q9UPN7 881 aa35.78■■■■□ 3.32
TNFRSF25-215ENST00000485036 HSPA5P11021 654 aaKnown RBP35.77■■■■□ 3.32
TNFRSF25-215ENST00000485036 CFAP65Q6ZU64 1925 aaKnown RBP35.77■■■■□ 3.32
TNFRSF25-215ENST00000485036 PIK3C2BO00750 1634 aa35.77■■■■□ 3.32
TNFRSF25-215ENST00000485036 MROH2AA6NES4 1674 aa35.76■■■■□ 3.32
TNFRSF25-215ENST00000485036 ZNF326Q5BKZ1 582 aaKnown RBP35.76■■■■□ 3.31
TNFRSF25-215ENST00000485036 HIRIP3Q9BW71 556 aaPredicted RBP35.76■■■■□ 3.31
TNFRSF25-215ENST00000485036 KDM2AQ9Y2K7 1162 aa35.76■■■■□ 3.31
TNFRSF25-215ENST00000485036 SYNMO15061 1565 aa35.75■■■■□ 3.31
TNFRSF25-215ENST00000485036 ADGRB3O60242 1522 aa35.75■■■■□ 3.31
TNFRSF25-215ENST00000485036 PREX1Q8TCU6 1659 aa35.73■■■■□ 3.31
TNFRSF25-215ENST00000485036 IFT172Q9UG01 1749 aa35.73■■■■□ 3.31
TNFRSF25-215ENST00000485036 MADDQ8WXG6 1647 aa35.72■■■■□ 3.31
TNFRSF25-215ENST00000485036 LAMC1P11047 1609 aa35.71■■■■□ 3.31
TNFRSF25-215ENST00000485036 STAC3Q96MF2 364 aa35.71■■■■□ 3.31
TNFRSF25-215ENST00000485036 CLTCQ00610 1675 aaKnown RBP35.7■■■■□ 3.31
TNFRSF25-215ENST00000485036 POLR1AO95602 1720 aaPredicted RBP35.67■■■■□ 3.3
TNFRSF25-215ENST00000485036 GPRASP1Q5JY77 1395 aa35.65■■■■□ 3.3
TNFRSF25-215ENST00000485036 USP47Q96K76 1375 aa35.65■■■■□ 3.3
TNFRSF25-215ENST00000485036 MYOM2P54296 1465 aa35.64■■■■□ 3.3
TNFRSF25-215ENST00000485036 ROCK2O75116 1388 aaKnown RBP35.61■■■■□ 3.29
TNFRSF25-215ENST00000485036 ERVK-7P63135 1459 aa35.59■■■■□ 3.29
TNFRSF25-215ENST00000485036 KIAA1210Q9ULL0 1709 aa35.59■■■■□ 3.29
TNFRSF25-215ENST00000485036 PPLO60437 1756 aa35.58■■■■□ 3.29
TNFRSF25-215ENST00000485036 CARD11Q9BXL7 1154 aa35.57■■■■□ 3.29
TNFRSF25-215ENST00000485036 SPATA31D1Q6ZQQ2 1576 aa35.54■■■■□ 3.28
TNFRSF25-215ENST00000485036 NRXN1Q9ULB1 1477 aa35.54■■■■□ 3.28
TNFRSF25-215ENST00000485036 SLC52A1Q9NWF4 448 aa35.52■■■■□ 3.28
TNFRSF25-215ENST00000485036 WASHC2AQ641Q2 1341 aa35.51■■■■□ 3.28
TNFRSF25-215ENST00000485036 DDX10Q13206 875 aaKnown RBP35.5■■■■□ 3.27
TNFRSF25-215ENST00000485036 MIER1Q8N108 512 aa35.49■■■■□ 3.27
TNFRSF25-215ENST00000485036 NBPF1Q3BBV0 1214 aa35.48■■■■□ 3.27
TNFRSF25-215ENST00000485036 MLECQ14165 292 aa35.47■■■■□ 3.27
TNFRSF25-215ENST00000485036 TMEM131LA2VDJ0 1609 aa35.47■■■■□ 3.27
TNFRSF25-215ENST00000485036 RPGRIP1LQ68CZ1 1315 aa35.46■■■■□ 3.27
TNFRSF25-215ENST00000485036 CCDC7Q96M83 1385 aa35.45■■■■□ 3.27
TNFRSF25-215ENST00000485036 IQGAP1P46940 1657 aa35.45■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms