RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 RGS20O76081 388 aa12.36□□□□□ -0.43
RC3H1-205ENST00000484867 A0A0G2JS52 829 aa12.33□□□□□ -0.44
RC3H1-205ENST00000484867 DCAF8L2P0C7V8 631 aa12.32□□□□□ -0.44
RC3H1-205ENST00000484867 ONECUT3O60422 494 aaPredicted RBP12.31□□□□□ -0.44
RC3H1-205ENST00000484867 DPYSL4O14531 572 aa12.3□□□□□ -0.44
RC3H1-205ENST00000484867 C6orf132Q5T0Z8 1188 aa12.3□□□□□ -0.44
RC3H1-205ENST00000484867 LAPTM4BQ86VI4 370 aa12.3□□□□□ -0.44
RC3H1-205ENST00000484867 EPAS1Q99814 870 aa12.3□□□□□ -0.44
RC3H1-205ENST00000484867 KIAA1468Q9P260 1216 aa12.29□□□□□ -0.44
RC3H1-205ENST00000484867 ANKK1Q8NFD2 765 aa12.28□□□□□ -0.44
RC3H1-205ENST00000484867 ITGBL1O95965 494 aaPredicted RBP12.27□□□□□ -0.45
RC3H1-205ENST00000484867 SOWAHBA6NEL2 793 aa12.26□□□□□ -0.45
RC3H1-205ENST00000484867 BCAMP50895 628 aa12.26□□□□□ -0.45
RC3H1-205ENST00000484867 ZFRQ96KR1 1074 aaKnown RBP12.25□□□□□ -0.45
RC3H1-205ENST00000484867 TRIM6-TRIM34B2RNG4 842 aa12.22□□□□□ -0.45
RC3H1-205ENST00000484867 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.45
RC3H1-205ENST00000484867 DDX12PQ92771 950 aa12.2□□□□□ -0.46
RC3H1-205ENST00000484867 SEPT9Q9UHD8 586 aaPredicted RBP12.2□□□□□ -0.46
RC3H1-205ENST00000484867 PDIA6Q15084 440 aa12.19□□□□□ -0.46
RC3H1-205ENST00000484867 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
RC3H1-205ENST00000484867 WBP1LQ9NX94 342 aa12.19□□□□□ -0.46
RC3H1-205ENST00000484867 FAM98CQ17RN3 349 aaKnown RBP12.18□□□□□ -0.46
RC3H1-205ENST00000484867 RBM33Q96EV2 1170 aaKnown RBP12.18□□□□□ -0.46
RC3H1-205ENST00000484867 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
RC3H1-205ENST00000484867 TSR1Q2NL82 804 aaKnown RBP12.14□□□□□ -0.47
RC3H1-205ENST00000484867 IRX2Q9BZI1 471 aaPredicted RBP12.14□□□□□ -0.47
RC3H1-205ENST00000484867 TSKSQ9UJT2 592 aa12.14□□□□□ -0.47
RC3H1-205ENST00000484867 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
RC3H1-205ENST00000484867 ARIH1Q9Y4X5 557 aaPredicted RBP12.12□□□□□ -0.47
RC3H1-205ENST00000484867 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
RC3H1-205ENST00000484867 NBR1Q14596 966 aa12.11□□□□□ -0.47
RC3H1-205ENST00000484867 TSR3Q9UJK0 312 aaKnown RBP12.1□□□□□ -0.47
RC3H1-205ENST00000484867 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.09□□□□□ -0.47
RC3H1-205ENST00000484867 FAM198AQ9UFP1 575 aa12.09□□□□□ -0.47
RC3H1-205ENST00000484867 MAP3K7O43318 606 aa12.08□□□□□ -0.48
RC3H1-205ENST00000484867 KCNC4Q03721 635 aa12.08□□□□□ -0.48
RC3H1-205ENST00000484867 PACS2Q86VP3 889 aa12.07□□□□□ -0.48
RC3H1-205ENST00000484867 LRCH3Q96II8 777 aa12.07□□□□□ -0.48
RC3H1-205ENST00000484867 HPS5Q9UPZ3 1129 aa12.07□□□□□ -0.48
RC3H1-205ENST00000484867 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
RC3H1-205ENST00000484867 C3orf80F5H4A9 247 aa12.05□□□□□ -0.48
RC3H1-205ENST00000484867 PRSS12P56730 875 aa12.04□□□□□ -0.48
RC3H1-205ENST00000484867 E2F4Q16254 413 aa12.04□□□□□ -0.48
RC3H1-205ENST00000484867 CDCA7LQ96GN5 454 aa12.04□□□□□ -0.48
RC3H1-205ENST00000484867 CERKQ8TCT0 537 aa12□□□□□ -0.49
RC3H1-205ENST00000484867 SMAPO00193 183 aa11.99□□□□□ -0.49
RC3H1-205ENST00000484867 OSBPP22059 807 aa11.99□□□□□ -0.49
RC3H1-205ENST00000484867 TJAP1Q5JTD0 557 aa11.99□□□□□ -0.49
RC3H1-205ENST00000484867 SAMD7Q7Z3H4 446 aa11.98□□□□□ -0.49
RC3H1-205ENST00000484867 TATDN2Q93075 761 aa11.97□□□□□ -0.49
RC3H1-205ENST00000484867 PPP4CP60510 307 aa11.96□□□□□ -0.49
RC3H1-205ENST00000484867 GRXCR2A6NFK2 248 aa11.95□□□□□ -0.5
RC3H1-205ENST00000484867 CDHR5Q9HBB8 845 aa11.95□□□□□ -0.5
RC3H1-205ENST00000484867 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.95□□□□□ -0.5
RC3H1-205ENST00000484867 TTC13Q8NBP0 860 aa11.94□□□□□ -0.5
RC3H1-205ENST00000484867 RBM27Q9P2N5 1060 aaKnown RBP11.94□□□□□ -0.5
RC3H1-205ENST00000484867 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
RC3H1-205ENST00000484867 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
RC3H1-205ENST00000484867 PNMA3Q9UL41 463 aa11.91□□□□□ -0.5
RC3H1-205ENST00000484867 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
RC3H1-205ENST00000484867 MTRQ99707 1265 aa11.89□□□□□ -0.51
RC3H1-205ENST00000484867 LCE2BO14633 110 aa11.88□□□□□ -0.51
RC3H1-205ENST00000484867 NUDT18Q6ZVK8 323 aa11.88□□□□□ -0.51
RC3H1-205ENST00000484867 WDR70Q9NW82 654 aa11.88□□□□□ -0.51
RC3H1-205ENST00000484867 APLP1P51693 650 aa11.86□□□□□ -0.51
RC3H1-205ENST00000484867 IL21Q9HBE4 155 aa11.86□□□□□ -0.51
RC3H1-205ENST00000484867 AMER1Q5JTC6 1135 aaPredicted RBP11.85□□□□□ -0.51
RC3H1-205ENST00000484867 Q6ZNB5 142 aa11.85□□□□□ -0.51
RC3H1-205ENST00000484867 ZNF516Q92618 1163 aa11.85□□□□□ -0.51
RC3H1-205ENST00000484867 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
RC3H1-205ENST00000484867 RTN4Q9NQC3 1192 aaKnown RBP11.83□□□□□ -0.52
RC3H1-205ENST00000484867 LAPTM4AQ15012 233 aa11.82□□□□□ -0.52
RC3H1-205ENST00000484867 PPP1R18Q6NYC8 613 aa11.82□□□□□ -0.52
RC3H1-205ENST00000484867 PADI6Q6TGC4 694 aa11.81□□□□□ -0.52
RC3H1-205ENST00000484867 EYA1Q99502 592 aa11.8□□□□□ -0.52
RC3H1-205ENST00000484867 PRKD2Q9BZL6 878 aa11.8□□□□□ -0.52
RC3H1-205ENST00000484867 SWT1Q5T5J6 900 aaKnown RBP11.78□□□□□ -0.52
RC3H1-205ENST00000484867 V9GY48 417 aaPredicted RBP11.78□□□□□ -0.52
RC3H1-205ENST00000484867 GFRA3O60609 400 aa11.77□□□□□ -0.53
RC3H1-205ENST00000484867 NKX2-3Q8TAU0 364 aa11.77□□□□□ -0.53
RC3H1-205ENST00000484867 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.77□□□□□ -0.53
RC3H1-205ENST00000484867 HDGFP51858 240 aaKnown RBP11.76□□□□□ -0.53
RC3H1-205ENST00000484867 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
RC3H1-205ENST00000484867 RNF40O75150 1001 aa11.73□□□□□ -0.53
RC3H1-205ENST00000484867 MLLT3P42568 568 aaPredicted RBP11.73□□□□□ -0.53
RC3H1-205ENST00000484867 NRG2O14511 850 aaPredicted RBP11.72□□□□□ -0.53
RC3H1-205ENST00000484867 TRAF7Q6Q0C0 670 aa11.72□□□□□ -0.53
RC3H1-205ENST00000484867 NECTIN2Q92692 538 aa11.72□□□□□ -0.53
RC3H1-205ENST00000484867 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
RC3H1-205ENST00000484867 COPS2P61201 443 aa11.69□□□□□ -0.54
RC3H1-205ENST00000484867 PTGDRQ13258 359 aa11.69□□□□□ -0.54
RC3H1-205ENST00000484867 ZPR1O75312 459 aa11.67□□□□□ -0.54
RC3H1-205ENST00000484867 KCNV2Q8TDN2 545 aa11.67□□□□□ -0.54
RC3H1-205ENST00000484867 TMUB1Q9BVT8 246 aa11.67□□□□□ -0.54
RC3H1-205ENST00000484867 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
RC3H1-205ENST00000484867 EMID1Q96A84 441 aaPredicted RBP11.64□□□□□ -0.55
RC3H1-205ENST00000484867 ADGRG1Q9Y653 693 aa11.64□□□□□ -0.55
RC3H1-205ENST00000484867 TMEM134Q9H6X4 195 aa11.63□□□□□ -0.55
RC3H1-205ENST00000484867 PRR14Q9BWN1 585 aa11.62□□□□□ -0.55
RC3H1-205ENST00000484867 DNAJB2P25686 324 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms