RNA–Protein interactions for RNA: ENST00000484538.1

MDH1-211, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-211ENST00000484538 EPAS1Q99814 870 aa14.89□□□□□ -0.03
MDH1-211ENST00000484538 PTPREP23469 700 aa14.86□□□□□ -0.03
MDH1-211ENST00000484538 PRIM1P49642 420 aaKnown RBP14.85□□□□□ -0.03
MDH1-211ENST00000484538 TK2O00142 265 aa14.84□□□□□ -0.03
MDH1-211ENST00000484538 ADGRD1Q6QNK2 874 aa14.84□□□□□ -0.03
MDH1-211ENST00000484538 HRO43593 1189 aa14.81□□□□□ -0.04
MDH1-211ENST00000484538 EN1Q05925 392 aaPredicted RBP14.81□□□□□ -0.04
MDH1-211ENST00000484538 SLC4A5Q9BY07 1137 aa14.81□□□□□ -0.04
MDH1-211ENST00000484538 GRXCR2A6NFK2 248 aa14.8□□□□□ -0.04
MDH1-211ENST00000484538 COL9A1P20849 921 aa14.8□□□□□ -0.04
MDH1-211ENST00000484538 OSBPP22059 807 aa14.8□□□□□ -0.04
MDH1-211ENST00000484538 C6orf132Q5T0Z8 1188 aa14.8□□□□□ -0.04
MDH1-211ENST00000484538 ZBED2Q9BTP6 218 aa14.8□□□□□ -0.04
MDH1-211ENST00000484538 KCNH8Q96L42 1107 aa14.79□□□□□ -0.04
MDH1-211ENST00000484538 VPS9D1Q9Y2B5 631 aa14.79□□□□□ -0.04
MDH1-211ENST00000484538 PPP1R3GB7ZBB8 358 aa14.77□□□□□ -0.05
MDH1-211ENST00000484538 MLLT3P42568 568 aaPredicted RBP14.77□□□□□ -0.05
MDH1-211ENST00000484538 RBM33Q96EV2 1170 aaKnown RBP14.77□□□□□ -0.05
MDH1-211ENST00000484538 SEMA3EO15041 775 aa14.75□□□□□ -0.05
MDH1-211ENST00000484538 TSR1Q2NL82 804 aaKnown RBP14.75□□□□□ -0.05
MDH1-211ENST00000484538 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
MDH1-211ENST00000484538 TESPA1A2RU30 521 aaPredicted RBP14.72□□□□□ -0.05
MDH1-211ENST00000484538 TULP1O00294 542 aaPredicted RBP14.72□□□□□ -0.05
MDH1-211ENST00000484538 BHMG1C9JSJ3 638 aaPredicted RBP14.71□□□□□ -0.05
MDH1-211ENST00000484538 MAP3K7O43318 606 aa14.71□□□□□ -0.05
MDH1-211ENST00000484538 PROX2Q3B8N5 592 aa14.69□□□□□ -0.06
MDH1-211ENST00000484538 RNF166Q96A37 237 aaPredicted RBP14.68□□□□□ -0.06
MDH1-211ENST00000484538 CDHR5Q9HBB8 845 aa14.67□□□□□ -0.06
MDH1-211ENST00000484538 TPRNQ4KMQ1 711 aa14.66□□□□□ -0.06
MDH1-211ENST00000484538 SMYD5Q6GMV2 418 aa14.66□□□□□ -0.06
MDH1-211ENST00000484538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.66□□□□□ -0.06
MDH1-211ENST00000484538 ONECUT3O60422 494 aaPredicted RBP14.62□□□□□ -0.07
MDH1-211ENST00000484538 LMOD2Q6P5Q4 547 aa14.62□□□□□ -0.07
MDH1-211ENST00000484538 NPDC1Q9NQX5 325 aaPredicted RBP14.62□□□□□ -0.07
MDH1-211ENST00000484538 RABGEF1Q9UJ41 708 aa14.62□□□□□ -0.07
MDH1-211ENST00000484538 PRKCSHP14314 528 aaPredicted RBP14.61□□□□□ -0.07
MDH1-211ENST00000484538 TRIM6-TRIM34B2RNG4 842 aa14.6□□□□□ -0.07
MDH1-211ENST00000484538 CERKQ8TCT0 537 aa14.58□□□□□ -0.08
MDH1-211ENST00000484538 FAM198AQ9UFP1 575 aa14.58□□□□□ -0.08
MDH1-211ENST00000484538 TSKSQ9UJT2 592 aa14.58□□□□□ -0.08
MDH1-211ENST00000484538 KIAA1468Q9P260 1216 aa14.57□□□□□ -0.08
MDH1-211ENST00000484538 PRSS12P56730 875 aa14.56□□□□□ -0.08
MDH1-211ENST00000484538 CDCA7LQ96GN5 454 aa14.55□□□□□ -0.08
MDH1-211ENST00000484538 NBPF3Q9H094 633 aa14.54□□□□□ -0.08
MDH1-211ENST00000484538 MRPL50Q8N5N7 158 aaKnown RBP14.53□□□□□ -0.08
MDH1-211ENST00000484538 TTC13Q8NBP0 860 aa14.52□□□□□ -0.09
MDH1-211ENST00000484538 STAC3Q96MF2 364 aa14.52□□□□□ -0.09
MDH1-211ENST00000484538 RBM27Q9P2N5 1060 aaKnown RBP14.51□□□□□ -0.09
MDH1-211ENST00000484538 C3orf80F5H4A9 247 aa14.5□□□□□ -0.09
MDH1-211ENST00000484538 PTGDRQ13258 359 aa14.5□□□□□ -0.09
MDH1-211ENST00000484538 KCTD12Q96CX2 325 aaKnown RBP14.49□□□□□ -0.09
MDH1-211ENST00000484538 RBM26Q5T8P6 1007 aaKnown RBP14.48□□□□□ -0.09
MDH1-211ENST00000484538 LAPTM4BQ86VI4 370 aa14.48□□□□□ -0.09
MDH1-211ENST00000484538 SEPT9Q9UHD8 586 aaPredicted RBP14.47□□□□□ -0.09
MDH1-211ENST00000484538 PACS2Q86VP3 889 aa14.46□□□□□ -0.09
MDH1-211ENST00000484538 PADI6Q6TGC4 694 aa14.45□□□□□ -0.1
MDH1-211ENST00000484538 NUTM2FA1L443 756 aa14.44□□□□□ -0.1
MDH1-211ENST00000484538 THSD4Q6ZMP0 1018 aa14.43□□□□□ -0.1
MDH1-211ENST00000484538 WNT2BQ93097 391 aa14.43□□□□□ -0.1
MDH1-211ENST00000484538 GPR37O15354 613 aa14.42□□□□□ -0.1
MDH1-211ENST00000484538 FAM98CQ17RN3 349 aaKnown RBP14.42□□□□□ -0.1
MDH1-211ENST00000484538 ZC3H15Q8WU90 426 aaKnown RBP14.42□□□□□ -0.1
MDH1-211ENST00000484538 ZFRQ96KR1 1074 aaKnown RBP14.42□□□□□ -0.1
MDH1-211ENST00000484538 SMAPO00193 183 aa14.41□□□□□ -0.1
MDH1-211ENST00000484538 TATDN2Q93075 761 aa14.41□□□□□ -0.1
MDH1-211ENST00000484538 GOLGA8CPA6NN73 597 aa14.4□□□□□ -0.1
MDH1-211ENST00000484538 GPIHBP1Q8IV16 184 aa14.4□□□□□ -0.1
MDH1-211ENST00000484538 HCSTQ9UBK5 93 aa14.4□□□□□ -0.1
MDH1-211ENST00000484538 PNMA3Q9UL41 463 aa14.38□□□□□ -0.11
MDH1-211ENST00000484538 NBPF26B4DH59 902 aa14.37□□□□□ -0.11
MDH1-211ENST00000484538 FCHSD2O94868 740 aa14.37□□□□□ -0.11
MDH1-211ENST00000484538 NUDT18Q6ZVK8 323 aa14.37□□□□□ -0.11
MDH1-211ENST00000484538 ANKK1Q8NFD2 765 aa14.36□□□□□ -0.11
MDH1-211ENST00000484538 SOWAHBA6NEL2 793 aa14.34□□□□□ -0.11
MDH1-211ENST00000484538 EYA1Q99502 592 aa14.34□□□□□ -0.11
MDH1-211ENST00000484538 BCAMP50895 628 aa14.33□□□□□ -0.12
MDH1-211ENST00000484538 PTPN5P54829 565 aa14.33□□□□□ -0.12
MDH1-211ENST00000484538 HIC1Q14526 733 aa14.32□□□□□ -0.12
MDH1-211ENST00000484538 ZMYND10O75800 440 aa14.31□□□□□ -0.12
MDH1-211ENST00000484538 ADGRG1Q9Y653 693 aa14.31□□□□□ -0.12
MDH1-211ENST00000484538 FECHP22830 423 aa14.29□□□□□ -0.12
MDH1-211ENST00000484538 GNPATO15228 680 aa14.27□□□□□ -0.13
MDH1-211ENST00000484538 FAM161AQ3B820 660 aa14.27□□□□□ -0.13
MDH1-211ENST00000484538 BARGINQ6ZT62 677 aa14.27□□□□□ -0.13
MDH1-211ENST00000484538 SAMD7Q7Z3H4 446 aa14.27□□□□□ -0.13
MDH1-211ENST00000484538 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.27□□□□□ -0.13
MDH1-211ENST00000484538 LRCH3Q96II8 777 aa14.26□□□□□ -0.13
MDH1-211ENST00000484538 WBP1LQ9NX94 342 aa14.23□□□□□ -0.13
MDH1-211ENST00000484538 TSR3Q9UJK0 312 aaKnown RBP14.21□□□□□ -0.13
MDH1-211ENST00000484538 RBM46Q8TBY0 533 aaKnown RBP14.2□□□□□ -0.14
MDH1-211ENST00000484538 HPS5Q9UPZ3 1129 aa14.2□□□□□ -0.14
MDH1-211ENST00000484538 SWT1Q5T5J6 900 aaKnown RBP14.19□□□□□ -0.14
MDH1-211ENST00000484538 PXYLP1Q8TE99 480 aa14.19□□□□□ -0.14
MDH1-211ENST00000484538 SLC24A3Q9HC58 644 aa14.19□□□□□ -0.14
MDH1-211ENST00000484538 KRI1Q8N9T8 703 aaKnown RBP14.18□□□□□ -0.14
MDH1-211ENST00000484538 RCCD1A6NED2 376 aa14.17□□□□□ -0.14
MDH1-211ENST00000484538 DNAJB2P25686 324 aa14.16□□□□□ -0.14
MDH1-211ENST00000484538 METTL3Q86U44 580 aaKnown RBP14.16□□□□□ -0.14
MDH1-211ENST00000484538 TMEM134Q9H6X4 195 aa14.16□□□□□ -0.14
MDH1-211ENST00000484538 OATP04181 439 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms