RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PPP1R3GB7ZBB8 358 aa13.02□□□□□ -0.33
SCAF11-207ENST00000484275 PROX2Q3B8N5 592 aa13.01□□□□□ -0.33
SCAF11-207ENST00000484275 STAC3Q96MF2 364 aa13.01□□□□□ -0.33
SCAF11-207ENST00000484275 EPAS1Q99814 870 aa13.01□□□□□ -0.33
SCAF11-207ENST00000484275 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
SCAF11-207ENST00000484275 HCSTQ9UBK5 93 aa13.01□□□□□ -0.33
SCAF11-207ENST00000484275 ARIH1Q9Y4X5 557 aaPredicted RBP13□□□□□ -0.33
SCAF11-207ENST00000484275 C6orf132Q5T0Z8 1188 aa12.99□□□□□ -0.33
SCAF11-207ENST00000484275 RBM33Q96EV2 1170 aaKnown RBP12.99□□□□□ -0.33
SCAF11-207ENST00000484275 SPDYE16A6NNV3 312 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-207ENST00000484275 NBR1Q14596 966 aa12.95□□□□□ -0.34
SCAF11-207ENST00000484275 PRIM1P49642 420 aaKnown RBP12.94□□□□□ -0.34
SCAF11-207ENST00000484275 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
SCAF11-207ENST00000484275 EN1Q05925 392 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-207ENST00000484275 RABGEF1Q9UJ41 708 aa12.93□□□□□ -0.34
SCAF11-207ENST00000484275 TSR1Q2NL82 804 aaKnown RBP12.92□□□□□ -0.34
SCAF11-207ENST00000484275 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
SCAF11-207ENST00000484275 THSD4Q6ZMP0 1018 aa12.9□□□□□ -0.34
SCAF11-207ENST00000484275 PTPN5P54829 565 aa12.89□□□□□ -0.35
SCAF11-207ENST00000484275 WNT2BQ93097 391 aa12.89□□□□□ -0.35
SCAF11-207ENST00000484275 KIAA1468Q9P260 1216 aa12.89□□□□□ -0.35
SCAF11-207ENST00000484275 GRXCR2A6NFK2 248 aa12.88□□□□□ -0.35
SCAF11-207ENST00000484275 MAP3K7O43318 606 aa12.88□□□□□ -0.35
SCAF11-207ENST00000484275 GOLGA8CPA6NN73 597 aa12.87□□□□□ -0.35
SCAF11-207ENST00000484275 PLA2G2EQ9NZK7 142 aa12.87□□□□□ -0.35
SCAF11-207ENST00000484275 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
SCAF11-207ENST00000484275 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
SCAF11-207ENST00000484275 OSBPP22059 807 aa12.84□□□□□ -0.35
SCAF11-207ENST00000484275 KCNV2Q8TDN2 545 aa12.83□□□□□ -0.36
SCAF11-207ENST00000484275 SEPT9Q9UHD8 586 aaPredicted RBP12.83□□□□□ -0.36
SCAF11-207ENST00000484275 TSKSQ9UJT2 592 aa12.82□□□□□ -0.36
SCAF11-207ENST00000484275 LAPTM4BQ86VI4 370 aa12.8□□□□□ -0.36
SCAF11-207ENST00000484275 CDHR5Q9HBB8 845 aa12.8□□□□□ -0.36
SCAF11-207ENST00000484275 FAM198AQ9UFP1 575 aa12.79□□□□□ -0.36
SCAF11-207ENST00000484275 ZFRQ96KR1 1074 aaKnown RBP12.78□□□□□ -0.36
SCAF11-207ENST00000484275 BCAMP50895 628 aa12.77□□□□□ -0.37
SCAF11-207ENST00000484275 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
SCAF11-207ENST00000484275 PLCB2Q00722 1185 aa12.76□□□□□ -0.37
SCAF11-207ENST00000484275 ANKK1Q8NFD2 765 aa12.76□□□□□ -0.37
SCAF11-207ENST00000484275 CDCA7LQ96GN5 454 aa12.76□□□□□ -0.37
SCAF11-207ENST00000484275 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
SCAF11-207ENST00000484275 MLLT3P42568 568 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-207ENST00000484275 SOWAHBA6NEL2 793 aa12.74□□□□□ -0.37
SCAF11-207ENST00000484275 PRSS12P56730 875 aa12.74□□□□□ -0.37
SCAF11-207ENST00000484275 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
SCAF11-207ENST00000484275 PACS2Q86VP3 889 aa12.72□□□□□ -0.37
SCAF11-207ENST00000484275 SMAPO00193 183 aa12.71□□□□□ -0.37
SCAF11-207ENST00000484275 CERKQ8TCT0 537 aa12.71□□□□□ -0.37
SCAF11-207ENST00000484275 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
SCAF11-207ENST00000484275 WBP1LQ9NX94 342 aa12.68□□□□□ -0.38
SCAF11-207ENST00000484275 TATDN2Q93075 761 aa12.65□□□□□ -0.38
SCAF11-207ENST00000484275 TTC13Q8NBP0 860 aa12.64□□□□□ -0.39
SCAF11-207ENST00000484275 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.64□□□□□ -0.39
SCAF11-207ENST00000484275 PNMA3Q9UL41 463 aa12.64□□□□□ -0.39
SCAF11-207ENST00000484275 IFFO2Q5TF58 517 aa12.63□□□□□ -0.39
SCAF11-207ENST00000484275 LRCH3Q96II8 777 aa12.63□□□□□ -0.39
SCAF11-207ENST00000484275 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
SCAF11-207ENST00000484275 PADI6Q6TGC4 694 aa12.62□□□□□ -0.39
SCAF11-207ENST00000484275 HPS5Q9UPZ3 1129 aa12.62□□□□□ -0.39
SCAF11-207ENST00000484275 NBPF26B4DH59 902 aa12.61□□□□□ -0.39
SCAF11-207ENST00000484275 NUDT18Q6ZVK8 323 aa12.61□□□□□ -0.39
SCAF11-207ENST00000484275 SAMD7Q7Z3H4 446 aa12.61□□□□□ -0.39
SCAF11-207ENST00000484275 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
SCAF11-207ENST00000484275 SEMA3EO15041 775 aa12.6□□□□□ -0.39
SCAF11-207ENST00000484275 TSR3Q9UJK0 312 aaKnown RBP12.6□□□□□ -0.39
SCAF11-207ENST00000484275 ITGBL1O95965 494 aaPredicted RBP12.58□□□□□ -0.4
SCAF11-207ENST00000484275 NYAP1Q6ZVC0 841 aa12.57□□□□□ -0.4
SCAF11-207ENST00000484275 PTGDRQ13258 359 aa12.55□□□□□ -0.4
SCAF11-207ENST00000484275 A0A0G2JS52 829 aa12.54□□□□□ -0.4
SCAF11-207ENST00000484275 HAP1P54257 671 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-207ENST00000484275 KDM2AQ9Y2K7 1162 aa12.53□□□□□ -0.4
SCAF11-207ENST00000484275 PPP4CP60510 307 aa12.52□□□□□ -0.41
SCAF11-207ENST00000484275 EYA1Q99502 592 aa12.52□□□□□ -0.41
SCAF11-207ENST00000484275 NUTM2FA1L443 756 aa12.49□□□□□ -0.41
SCAF11-207ENST00000484275 TESPA1A2RU30 521 aaPredicted RBP12.48□□□□□ -0.41
SCAF11-207ENST00000484275 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
SCAF11-207ENST00000484275 KCNC4Q03721 635 aa12.46□□□□□ -0.41
SCAF11-207ENST00000484275 RNF40O75150 1001 aa12.45□□□□□ -0.42
SCAF11-207ENST00000484275 FAM161AQ3B820 660 aa12.45□□□□□ -0.42
SCAF11-207ENST00000484275 ADGRG1Q9Y653 693 aa12.45□□□□□ -0.42
SCAF11-207ENST00000484275 RBM26Q5T8P6 1007 aaKnown RBP12.44□□□□□ -0.42
SCAF11-207ENST00000484275 APLP1P51693 650 aa12.43□□□□□ -0.42
SCAF11-207ENST00000484275 TJAP1Q5JTD0 557 aa12.43□□□□□ -0.42
SCAF11-207ENST00000484275 HDGFP51858 240 aaKnown RBP12.42□□□□□ -0.42
SCAF11-207ENST00000484275 FCHSD2O94868 740 aa12.41□□□□□ -0.42
SCAF11-207ENST00000484275 RGS20O76081 388 aa12.4□□□□□ -0.42
SCAF11-207ENST00000484275 MTRQ99707 1265 aa12.4□□□□□ -0.42
SCAF11-207ENST00000484275 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
SCAF11-207ENST00000484275 RBM46Q8TBY0 533 aaKnown RBP12.37□□□□□ -0.43
SCAF11-207ENST00000484275 GPR37O15354 613 aa12.36□□□□□ -0.43
SCAF11-207ENST00000484275 DNAJB2P25686 324 aa12.36□□□□□ -0.43
SCAF11-207ENST00000484275 ZNF516Q92618 1163 aa12.36□□□□□ -0.43
SCAF11-207ENST00000484275 TMEM134Q9H6X4 195 aa12.36□□□□□ -0.43
SCAF11-207ENST00000484275 RCCD1A6NED2 376 aa12.35□□□□□ -0.43
SCAF11-207ENST00000484275 FECHP22830 423 aa12.34□□□□□ -0.43
SCAF11-207ENST00000484275 IL21Q9HBE4 155 aa12.34□□□□□ -0.43
SCAF11-207ENST00000484275 HIC1Q14526 733 aa12.33□□□□□ -0.44
SCAF11-207ENST00000484275 SMYD5Q6GMV2 418 aa12.33□□□□□ -0.44
SCAF11-207ENST00000484275 PXYLP1Q8TE99 480 aa12.3□□□□□ -0.44
SCAF11-207ENST00000484275 COPS2P61201 443 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms