RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 HSPA5P11021 654 aaKnown RBP10.35□□□□□ -0.75
SHROOM3-206ENST00000484236 NUP155O75694 1391 aa10.35□□□□□ -0.75
SHROOM3-206ENST00000484236 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
SHROOM3-206ENST00000484236 HNRNPMP52272 730 aaKnown RBP eCLIP10.34□□□□□ -0.75
SHROOM3-206ENST00000484236 PKD2Q13563 968 aa10.34□□□□□ -0.75
SHROOM3-206ENST00000484236 SLC4A2P04920 1241 aa10.33□□□□□ -0.76
SHROOM3-206ENST00000484236 PELP1Q8IZL8 1130 aaKnown RBP10.33□□□□□ -0.76
SHROOM3-206ENST00000484236 HIRIP3Q9BW71 556 aaPredicted RBP10.33□□□□□ -0.76
SHROOM3-206ENST00000484236 DUOX2Q9NRD8 1548 aa10.33□□□□□ -0.76
SHROOM3-206ENST00000484236 SPATA31E1Q6ZUB1 1445 aa10.33□□□□□ -0.76
SHROOM3-206ENST00000484236 IQGAP3Q86VI3 1631 aa10.32□□□□□ -0.76
SHROOM3-206ENST00000484236 FAM135AQ9P2D6 1515 aa10.32□□□□□ -0.76
SHROOM3-206ENST00000484236 NBPF8Q3BBV2 869 aa10.31□□□□□ -0.76
SHROOM3-206ENST00000484236 EFCAB2Q5VUJ9 269 aa10.31□□□□□ -0.76
SHROOM3-206ENST00000484236 ABCC1P33527 1531 aa10.31□□□□□ -0.76
SHROOM3-206ENST00000484236 ERBINQ96RT1 1412 aa10.31□□□□□ -0.76
SHROOM3-206ENST00000484236 CNTLNQ9NXG0 1405 aa10.31□□□□□ -0.76
SHROOM3-206ENST00000484236 WASHC2AQ641Q2 1341 aa10.31□□□□□ -0.76
SHROOM3-206ENST00000484236 CCDC7Q96M83 1385 aa10.3□□□□□ -0.76
SHROOM3-206ENST00000484236 ARID4BQ4LE39 1312 aaPredicted RBP10.3□□□□□ -0.76
SHROOM3-206ENST00000484236 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
SHROOM3-206ENST00000484236 RALGAPBQ86X10 1494 aa10.3□□□□□ -0.76
SHROOM3-206ENST00000484236 RTEL1-TNFRSF6BF6WH68 1400 aa10.28□□□□□ -0.76
SHROOM3-206ENST00000484236 KDM5CP41229 1560 aa10.27□□□□□ -0.76
SHROOM3-206ENST00000484236 ATP10AO60312 1499 aa10.27□□□□□ -0.77
SHROOM3-206ENST00000484236 WDR7Q9Y4E6 1490 aa10.27□□□□□ -0.77
SHROOM3-206ENST00000484236 ABCA9Q8IUA7 1624 aa10.26□□□□□ -0.77
SHROOM3-206ENST00000484236 HAX1O00165 279 aa10.25□□□□□ -0.77
SHROOM3-206ENST00000484236 KCNH8Q96L42 1107 aa10.25□□□□□ -0.77
SHROOM3-206ENST00000484236 USP47Q96K76 1375 aa10.25□□□□□ -0.77
SHROOM3-206ENST00000484236 CCDC144AA2RUR9 1427 aa10.24□□□□□ -0.77
SHROOM3-206ENST00000484236 LAMC1P11047 1609 aa10.24□□□□□ -0.77
SHROOM3-206ENST00000484236 ROCK2O75116 1388 aaKnown RBP10.24□□□□□ -0.77
SHROOM3-206ENST00000484236 KIF7Q2M1P5 1343 aa10.23□□□□□ -0.77
SHROOM3-206ENST00000484236 ZFYVE16Q7Z3T8 1539 aa10.23□□□□□ -0.77
SHROOM3-206ENST00000484236 DEPDC5O75140 1603 aa10.22□□□□□ -0.77
SHROOM3-206ENST00000484236 EIF2AK4Q9P2K8 1649 aaKnown RBP10.22□□□□□ -0.77
SHROOM3-206ENST00000484236 INO80Q9ULG1 1556 aaPredicted RBP10.22□□□□□ -0.77
SHROOM3-206ENST00000484236 TRPM1Q7Z4N2 1603 aa10.22□□□□□ -0.77
SHROOM3-206ENST00000484236 BCORL1Q5H9F3 1711 aa10.21□□□□□ -0.77
SHROOM3-206ENST00000484236 C11orf95C9JLR9 678 aaPredicted RBP10.21□□□□□ -0.77
SHROOM3-206ENST00000484236 PIP4P2Q8N4L2 257 aa10.21□□□□□ -0.77
SHROOM3-206ENST00000484236 TRAPPC8Q9Y2L5 1435 aa10.21□□□□□ -0.78
SHROOM3-206ENST00000484236 FANCAO15360 1455 aa10.2□□□□□ -0.78
SHROOM3-206ENST00000484236 SPAG9O60271 1321 aaKnown RBP10.2□□□□□ -0.78
SHROOM3-206ENST00000484236 PLA2R1Q13018 1463 aa10.2□□□□□ -0.78
SHROOM3-206ENST00000484236 CFAP74Q9C0B2 1584 aa10.2□□□□□ -0.78
SHROOM3-206ENST00000484236 PRKRIP1Q9H875 184 aaPredicted RBP10.2□□□□□ -0.78
SHROOM3-206ENST00000484236 PRAG1Q86YV5 1406 aa10.19□□□□□ -0.78
SHROOM3-206ENST00000484236 TET3O43151 1660 aa10.18□□□□□ -0.78
SHROOM3-206ENST00000484236 ATP7AQ04656 1500 aa10.18□□□□□ -0.78
SHROOM3-206ENST00000484236 GPRASP1Q5JY77 1395 aa10.18□□□□□ -0.78
SHROOM3-206ENST00000484236 POLA2Q14181 598 aa10.18□□□□□ -0.78
SHROOM3-206ENST00000484236 SAMD1Q6SPF0 538 aaPredicted RBP10.18□□□□□ -0.78
SHROOM3-206ENST00000484236 STAC3Q96MF2 364 aa10.18□□□□□ -0.78
SHROOM3-206ENST00000484236 CARD11Q9BXL7 1154 aa10.18□□□□□ -0.78
SHROOM3-206ENST00000484236 SUPT16HQ9Y5B9 1047 aaKnown RBP10.18□□□□□ -0.78
SHROOM3-206ENST00000484236 VWDEQ8N2E2 1590 aa10.18□□□□□ -0.78
SHROOM3-206ENST00000484236 NEURL4Q96JN8 1562 aa10.18□□□□□ -0.78
SHROOM3-206ENST00000484236 ASXL2Q76L83 1435 aa10.17□□□□□ -0.78
SHROOM3-206ENST00000484236 ZNF326Q5BKZ1 582 aaKnown RBP10.17□□□□□ -0.78
SHROOM3-206ENST00000484236 OSCARQ8IYS5 282 aa10.17□□□□□ -0.78
SHROOM3-206ENST00000484236 DCAF11Q8TEB1 546 aa10.17□□□□□ -0.78
SHROOM3-206ENST00000484236 E9PCH4 1651 aa10.17□□□□□ -0.78
SHROOM3-206ENST00000484236 TRPM2O94759 1503 aa10.17□□□□□ -0.78
SHROOM3-206ENST00000484236 A2MP01023 1474 aa10.17□□□□□ -0.78
SHROOM3-206ENST00000484236 CEP152O94986 1710 aa10.16□□□□□ -0.78
SHROOM3-206ENST00000484236 SPHKAPQ2M3C7 1700 aa10.16□□□□□ -0.78
SHROOM3-206ENST00000484236 KTN1Q86UP2 1357 aaKnown RBP10.16□□□□□ -0.78
SHROOM3-206ENST00000484236 ADGRL1O94910 1474 aa10.16□□□□□ -0.78
SHROOM3-206ENST00000484236 KANK1Q14678 1352 aa10.15□□□□□ -0.78
SHROOM3-206ENST00000484236 PRDM15P57071 1507 aaPredicted RBP10.15□□□□□ -0.78
SHROOM3-206ENST00000484236 PTPRTO14522 1441 aa10.15□□□□□ -0.79
SHROOM3-206ENST00000484236 DHX29Q7Z478 1369 aaKnown RBP10.14□□□□□ -0.79
SHROOM3-206ENST00000484236 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
SHROOM3-206ENST00000484236 AKT1S1Q96B36 256 aa10.14□□□□□ -0.79
SHROOM3-206ENST00000484236 SCAPERQ9BY12 1400 aa10.14□□□□□ -0.79
SHROOM3-206ENST00000484236 RNF17Q9BXT8 1623 aaKnown RBP10.14□□□□□ -0.79
SHROOM3-206ENST00000484236 KDM2AQ9Y2K7 1162 aa10.13□□□□□ -0.79
SHROOM3-206ENST00000484236 ZNF518AQ6AHZ1 1483 aa10.12□□□□□ -0.79
SHROOM3-206ENST00000484236 KIDINS220Q9ULH0 1771 aa10.12□□□□□ -0.79
SHROOM3-206ENST00000484236 NEFLP07196 543 aa10.12□□□□□ -0.79
SHROOM3-206ENST00000484236 AFAP1Q8N556 730 aa10.12□□□□□ -0.79
SHROOM3-206ENST00000484236 KIAA1210Q9ULL0 1709 aa10.11□□□□□ -0.79
SHROOM3-206ENST00000484236 HNRNPUQ00839 825 aaKnown RBP eCLIP10.11□□□□□ -0.79
SHROOM3-206ENST00000484236 MRS2Q9HD23 443 aa10.11□□□□□ -0.79
SHROOM3-206ENST00000484236 LMTK2Q8IWU2 1503 aa10.11□□□□□ -0.79
SHROOM3-206ENST00000484236 MROH1Q8NDA8 1641 aa10.11□□□□□ -0.79
SHROOM3-206ENST00000484236 MADDQ8WXG6 1647 aa10.11□□□□□ -0.79
SHROOM3-206ENST00000484236 ST20-MTHFSA0A0A6YYL1 179 aa10.1□□□□□ -0.79
SHROOM3-206ENST00000484236 CLTCL1P53675 1640 aa10.1□□□□□ -0.79
SHROOM3-206ENST00000484236 MLH3Q9UHC1 1453 aa10.1□□□□□ -0.79
SHROOM3-206ENST00000484236 NEO1Q92859 1461 aa10.09□□□□□ -0.79
SHROOM3-206ENST00000484236 COL17A1Q9UMD9 1497 aaPredicted RBP10.09□□□□□ -0.79
SHROOM3-206ENST00000484236 ZBED9Q6R2W3 1325 aa10.08□□□□□ -0.8
SHROOM3-206ENST00000484236 WASHC2CQ9Y4E1 1318 aa10.08□□□□□ -0.8
SHROOM3-206ENST00000484236 EFCAB6Q5THR3 1501 aa10.08□□□□□ -0.8
SHROOM3-206ENST00000484236 KIF1BO60333 1816 aa10.08□□□□□ -0.8
SHROOM3-206ENST00000484236 EVX2Q03828 476 aa10.08□□□□□ -0.8
SHROOM3-206ENST00000484236 RALBP1Q15311 655 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms