RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 NEO1Q92859 1461 aa23.23■■□□□ 1.31
PCCB-217ENST00000484181 MYT1LQ9UL68 1186 aa23.23■■□□□ 1.31
PCCB-217ENST00000484181 RALGAPBQ86X10 1494 aa23.23■■□□□ 1.31
PCCB-217ENST00000484181 YTHDC1Q96MU7 727 aaKnown RBP23.22■■□□□ 1.31
PCCB-217ENST00000484181 POGZQ7Z3K3 1410 aa23.21■■□□□ 1.31
PCCB-217ENST00000484181 DHX29Q7Z478 1369 aaKnown RBP23.21■■□□□ 1.31
PCCB-217ENST00000484181 ANP32CO43423 234 aa23.2■■□□□ 1.3
PCCB-217ENST00000484181 KDM5CP41229 1560 aa23.2■■□□□ 1.3
PCCB-217ENST00000484181 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
PCCB-217ENST00000484181 TET3O43151 1660 aa23.18■■□□□ 1.3
PCCB-217ENST00000484181 RIMBP3CA6NJZ7 1639 aa23.17■■□□□ 1.3
PCCB-217ENST00000484181 RIMBP3BA6NNM3 1639 aa23.17■■□□□ 1.3
PCCB-217ENST00000484181 RIMBP3Q9UFD9 1639 aa23.17■■□□□ 1.3
PCCB-217ENST00000484181 SPATA31E1Q6ZUB1 1445 aa23.17■■□□□ 1.3
PCCB-217ENST00000484181 HECW2Q9P2P5 1572 aa23.16■■□□□ 1.3
PCCB-217ENST00000484181 MLH3Q9UHC1 1453 aa23.16■■□□□ 1.3
PCCB-217ENST00000484181 KIDINS220Q9ULH0 1771 aa23.16■■□□□ 1.3
PCCB-217ENST00000484181 PLA2R1Q13018 1463 aa23.15■■□□□ 1.3
PCCB-217ENST00000484181 POLR1AO95602 1720 aaPredicted RBP23.15■■□□□ 1.3
PCCB-217ENST00000484181 GLI2P10070 1586 aa23.15■■□□□ 1.3
PCCB-217ENST00000484181 VWDEQ8N2E2 1590 aa23.15■■□□□ 1.3
PCCB-217ENST00000484181 ZNF326Q5BKZ1 582 aaKnown RBP23.15■■□□□ 1.3
PCCB-217ENST00000484181 TRPM2O94759 1503 aa23.13■■□□□ 1.29
PCCB-217ENST00000484181 USP47Q96K76 1375 aa23.13■■□□□ 1.29
PCCB-217ENST00000484181 CCER2I3L3R5 266 aa23.13■■□□□ 1.29
PCCB-217ENST00000484181 WASHC2AQ641Q2 1341 aa23.12■■□□□ 1.29
PCCB-217ENST00000484181 MAP3K4Q9Y6R4 1608 aa23.12■■□□□ 1.29
PCCB-217ENST00000484181 E9PCH4 1651 aa23.12■■□□□ 1.29
PCCB-217ENST00000484181 DCAF11Q8TEB1 546 aa23.12■■□□□ 1.29
PCCB-217ENST00000484181 A2MP01023 1474 aa23.11■■□□□ 1.29
PCCB-217ENST00000484181 CCDC7Q96M83 1385 aa23.11■■□□□ 1.29
PCCB-217ENST00000484181 CNTLNQ9NXG0 1405 aa23.1■■□□□ 1.29
PCCB-217ENST00000484181 KIF3BO15066 747 aa23.09■■□□□ 1.29
PCCB-217ENST00000484181 SPHKAPQ2M3C7 1700 aa23.09■■□□□ 1.29
PCCB-217ENST00000484181 RNF17Q9BXT8 1623 aaKnown RBP23.09■■□□□ 1.29
PCCB-217ENST00000484181 ARID4BQ4LE39 1312 aaPredicted RBP23.09■■□□□ 1.29
PCCB-217ENST00000484181 CYB5RLQ6IPT4 315 aa23.09■■□□□ 1.29
PCCB-217ENST00000484181 PTPRTO14522 1441 aa23.07■■□□□ 1.28
PCCB-217ENST00000484181 PRAG1Q86YV5 1406 aa23.07■■□□□ 1.28
PCCB-217ENST00000484181 MROH1Q8NDA8 1641 aa23.07■■□□□ 1.28
PCCB-217ENST00000484181 CARD11Q9BXL7 1154 aa23.06■■□□□ 1.28
PCCB-217ENST00000484181 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
PCCB-217ENST00000484181 STAC3Q96MF2 364 aa23.06■■□□□ 1.28
PCCB-217ENST00000484181 BCORL1Q5H9F3 1711 aa23.06■■□□□ 1.28
PCCB-217ENST00000484181 KDM2AQ9Y2K7 1162 aa23.05■■□□□ 1.28
PCCB-217ENST00000484181 ROCK2O75116 1388 aaKnown RBP23.05■■□□□ 1.28
PCCB-217ENST00000484181 LAMC1P11047 1609 aa23.04■■□□□ 1.28
PCCB-217ENST00000484181 TRPM1Q7Z4N2 1603 aa23.04■■□□□ 1.28
PCCB-217ENST00000484181 NEURL4Q96JN8 1562 aa23.03■■□□□ 1.28
PCCB-217ENST00000484181 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
PCCB-217ENST00000484181 CEP152O94986 1710 aa23.03■■□□□ 1.28
PCCB-217ENST00000484181 ABCA6Q8N139 1617 aa23■■□□□ 1.27
PCCB-217ENST00000484181 KIF7Q2M1P5 1343 aa23■■□□□ 1.27
PCCB-217ENST00000484181 RGL3Q3MIN7 710 aa23■■□□□ 1.27
PCCB-217ENST00000484181 DIP2BQ9P265 1576 aa22.98■■□□□ 1.27
PCCB-217ENST00000484181 GPRASP1Q5JY77 1395 aa22.98■■□□□ 1.27
PCCB-217ENST00000484181 FRMPD1Q5SYB0 1578 aa22.98■■□□□ 1.27
PCCB-217ENST00000484181 SCAF1Q9H7N4 1312 aaKnown RBP22.97■■□□□ 1.27
PCCB-217ENST00000484181 RICTORQ6R327 1708 aa22.97■■□□□ 1.27
PCCB-217ENST00000484181 CLTCL1P53675 1640 aa22.96■■□□□ 1.27
PCCB-217ENST00000484181 DIP2CQ9Y2E4 1556 aa22.94■■□□□ 1.26
PCCB-217ENST00000484181 PPRC1Q5VV67 1664 aaKnown RBP22.94■■□□□ 1.26
PCCB-217ENST00000484181 C11orf95C9JLR9 678 aaPredicted RBP22.92■■□□□ 1.26
PCCB-217ENST00000484181 ZMYM4Q5VZL5 1548 aa22.91■■□□□ 1.26
PCCB-217ENST00000484181 FAM69CQ0P6D2 419 aa22.9■■□□□ 1.26
PCCB-217ENST00000484181 MADDQ8WXG6 1647 aa22.89■■□□□ 1.26
PCCB-217ENST00000484181 ZC3H13Q5T200 1668 aaKnown RBP22.89■■□□□ 1.25
PCCB-217ENST00000484181 RAPGEF3O95398 923 aa22.88■■□□□ 1.25
PCCB-217ENST00000484181 KIF1BO60333 1816 aa22.87■■□□□ 1.25
PCCB-217ENST00000484181 GTF3C3Q9Y5Q9 886 aa22.87■■□□□ 1.25
PCCB-217ENST00000484181 ABCC3O15438 1527 aa22.87■■□□□ 1.25
PCCB-217ENST00000484181 ST20-MTHFSA0A0A6YYL1 179 aa22.86■■□□□ 1.25
PCCB-217ENST00000484181 MYOM2P54296 1465 aa22.85■■□□□ 1.25
PCCB-217ENST00000484181 GGT6Q6P531 493 aa22.84■■□□□ 1.25
PCCB-217ENST00000484181 CAMSAP1Q5T5Y3 1602 aa22.83■■□□□ 1.25
PCCB-217ENST00000484181 WASHC2CQ9Y4E1 1318 aa22.83■■□□□ 1.25
PCCB-217ENST00000484181 KIAA1210Q9ULL0 1709 aa22.83■■□□□ 1.24
PCCB-217ENST00000484181 NPATQ14207 1427 aa22.82■■□□□ 1.24
PCCB-217ENST00000484181 PRKRIP1Q9H875 184 aaPredicted RBP22.81■■□□□ 1.24
PCCB-217ENST00000484181 POLR3GLQ9BT43 218 aa22.8■■□□□ 1.24
PCCB-217ENST00000484181 ADGRB3O60242 1522 aa22.8■■□□□ 1.24
PCCB-217ENST00000484181 REREQ9P2R6 1566 aa22.79■■□□□ 1.24
PCCB-217ENST00000484181 NBPF1Q3BBV0 1214 aa22.78■■□□□ 1.24
PCCB-217ENST00000484181 ARHGAP31Q2M1Z3 1444 aa22.78■■□□□ 1.24
PCCB-217ENST00000484181 EIF3AQ14152 1382 aaKnown RBP22.78■■□□□ 1.24
PCCB-217ENST00000484181 COL17A1Q9UMD9 1497 aaPredicted RBP22.77■■□□□ 1.24
PCCB-217ENST00000484181 YEATS2Q9ULM3 1422 aa22.77■■□□□ 1.24
PCCB-217ENST00000484181 UGGT1Q9NYU2 1555 aa22.76■■□□□ 1.23
PCCB-217ENST00000484181 IQGAP1P46940 1657 aa22.75■■□□□ 1.23
PCCB-217ENST00000484181 SCAF11Q99590 1463 aaKnown RBP22.75■■□□□ 1.23
PCCB-217ENST00000484181 IFT172Q9UG01 1749 aa22.75■■□□□ 1.23
PCCB-217ENST00000484181 KTN1Q86UP2 1357 aaKnown RBP22.75■■□□□ 1.23
PCCB-217ENST00000484181 TSPOAP1O95153 1857 aa22.73■■□□□ 1.23
PCCB-217ENST00000484181 SLC24A1O60721 1099 aa22.73■■□□□ 1.23
PCCB-217ENST00000484181 TMF1P82094 1093 aa22.73■■□□□ 1.23
PCCB-217ENST00000484181 NOS1P29475 1434 aa22.73■■□□□ 1.23
PCCB-217ENST00000484181 MROH2AA6NES4 1674 aa22.72■■□□□ 1.23
PCCB-217ENST00000484181 RPGRIP1LQ68CZ1 1315 aa22.71■■□□□ 1.23
PCCB-217ENST00000484181 AGLP35573 1532 aa22.71■■□□□ 1.23
PCCB-217ENST00000484181 NRXN1Q9ULB1 1477 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms