RNA–Protein interactions for RNA: ENST00000484081.1

CUL3-210, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-210ENST00000484081 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
CUL3-210ENST00000484081 EMP3P54852 163 aa12.16□□□□□ -0.46
CUL3-210ENST00000484081 ERBB3P21860 1342 aa12.15□□□□□ -0.46
CUL3-210ENST00000484081 BARGINQ6ZT62 677 aa12.15□□□□□ -0.46
CUL3-210ENST00000484081 FCHSD2O94868 740 aa12.14□□□□□ -0.47
CUL3-210ENST00000484081 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
CUL3-210ENST00000484081 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
CUL3-210ENST00000484081 HIC1Q14526 733 aa12.12□□□□□ -0.47
CUL3-210ENST00000484081 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
CUL3-210ENST00000484081 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
CUL3-210ENST00000484081 POTEEQ6S8J3 1075 aa12.11□□□□□ -0.47
CUL3-210ENST00000484081 GNPATO15228 680 aa12.1□□□□□ -0.47
CUL3-210ENST00000484081 FECHP22830 423 aa12.09□□□□□ -0.47
CUL3-210ENST00000484081 CERKQ8TCT0 537 aa12.09□□□□□ -0.47
CUL3-210ENST00000484081 HS3ST6Q96QI5 342 aa12.09□□□□□ -0.47
CUL3-210ENST00000484081 COL9A1P20849 921 aa12.08□□□□□ -0.48
CUL3-210ENST00000484081 PTPREP23469 700 aa12.08□□□□□ -0.48
CUL3-210ENST00000484081 ZNF687Q8N1G0 1237 aa12.08□□□□□ -0.48
CUL3-210ENST00000484081 PPP1R3GB7ZBB8 358 aa12.06□□□□□ -0.48
CUL3-210ENST00000484081 SLC24A3Q9HC58 644 aa12.06□□□□□ -0.48
CUL3-210ENST00000484081 TTC13Q8NBP0 860 aa12.05□□□□□ -0.48
CUL3-210ENST00000484081 MAP2K5Q13163 448 aa12.04□□□□□ -0.48
CUL3-210ENST00000484081 RBM27Q9P2N5 1060 aaKnown RBP12.04□□□□□ -0.48
CUL3-210ENST00000484081 KCNK17Q96T54 332 aa12.03□□□□□ -0.48
CUL3-210ENST00000484081 ARHGAP33O14559 1287 aa12.02□□□□□ -0.49
CUL3-210ENST00000484081 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
CUL3-210ENST00000484081 PBX2P40425 430 aa12.01□□□□□ -0.49
CUL3-210ENST00000484081 PSEN2P49810 448 aa12.01□□□□□ -0.49
CUL3-210ENST00000484081 PRSS12P56730 875 aa12.01□□□□□ -0.49
CUL3-210ENST00000484081 IRF6O14896 467 aa12□□□□□ -0.49
CUL3-210ENST00000484081 PADI6Q6TGC4 694 aa12□□□□□ -0.49
CUL3-210ENST00000484081 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
CUL3-210ENST00000484081 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
CUL3-210ENST00000484081 AXIN2Q9Y2T1 843 aa11.99□□□□□ -0.49
CUL3-210ENST00000484081 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
CUL3-210ENST00000484081 KRI1Q8N9T8 703 aaKnown RBP11.98□□□□□ -0.49
CUL3-210ENST00000484081 ZBED2Q9BTP6 218 aa11.98□□□□□ -0.49
CUL3-210ENST00000484081 CCDC102AQ96A19 550 aa11.97□□□□□ -0.49
CUL3-210ENST00000484081 AK7Q96M32 723 aa11.97□□□□□ -0.49
CUL3-210ENST00000484081 TSKSQ9UJT2 592 aa11.97□□□□□ -0.49
CUL3-210ENST00000484081 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
CUL3-210ENST00000484081 SLC4A5Q9BY07 1137 aa11.96□□□□□ -0.49
CUL3-210ENST00000484081 TRIM6-TRIM34B2RNG4 842 aa11.95□□□□□ -0.5
CUL3-210ENST00000484081 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
CUL3-210ENST00000484081 PROX2Q3B8N5 592 aa11.95□□□□□ -0.5
CUL3-210ENST00000484081 ADGRG1Q9Y653 693 aa11.94□□□□□ -0.5
CUL3-210ENST00000484081 TRIM66O15016 1216 aa11.93□□□□□ -0.5
CUL3-210ENST00000484081 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
CUL3-210ENST00000484081 FAM161AQ3B820 660 aa11.91□□□□□ -0.5
CUL3-210ENST00000484081 VPS9D1Q9Y2B5 631 aa11.9□□□□□ -0.5
CUL3-210ENST00000484081 POTEGQ6S5H5 508 aa11.89□□□□□ -0.51
CUL3-210ENST00000484081 METTL3Q86U44 580 aaKnown RBP11.89□□□□□ -0.51
CUL3-210ENST00000484081 PHOX2BQ99453 314 aa11.89□□□□□ -0.51
CUL3-210ENST00000484081 LSM11P83369 360 aaKnown RBP eCLIP11.88□□□□□ -0.51
CUL3-210ENST00000484081 AMHR2Q16671 573 aa11.88□□□□□ -0.51
CUL3-210ENST00000484081 PXYLP1Q8TE99 480 aa11.88□□□□□ -0.51
CUL3-210ENST00000484081 POTEMA6NI47 508 aa11.87□□□□□ -0.51
CUL3-210ENST00000484081 TK2O00142 265 aa11.87□□□□□ -0.51
CUL3-210ENST00000484081 OATP04181 439 aa11.87□□□□□ -0.51
CUL3-210ENST00000484081 EYA1Q99502 592 aa11.87□□□□□ -0.51
CUL3-210ENST00000484081 KRTAP3-3Q9BYR6 98 aa11.87□□□□□ -0.51
CUL3-210ENST00000484081 KRTAP3-2Q9BYR7 98 aa11.87□□□□□ -0.51
CUL3-210ENST00000484081 RABGEF1Q9UJ41 708 aa11.87□□□□□ -0.51
CUL3-210ENST00000484081 PACS2Q86VP3 889 aa11.86□□□□□ -0.51
CUL3-210ENST00000484081 TATDN2Q93075 761 aa11.86□□□□□ -0.51
CUL3-210ENST00000484081 KIAA1468Q9P260 1216 aa11.86□□□□□ -0.51
CUL3-210ENST00000484081 BHMG1C9JSJ3 638 aaPredicted RBP11.85□□□□□ -0.51
CUL3-210ENST00000484081 BRPF1P55201 1214 aaPredicted RBP11.85□□□□□ -0.51
CUL3-210ENST00000484081 PDE4DQ08499 809 aa11.85□□□□□ -0.51
CUL3-210ENST00000484081 NUDT18Q6ZVK8 323 aa11.85□□□□□ -0.51
CUL3-210ENST00000484081 NBPF26B4DH59 902 aa11.84□□□□□ -0.51
CUL3-210ENST00000484081 ADGRD1Q6QNK2 874 aa11.83□□□□□ -0.52
CUL3-210ENST00000484081 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
CUL3-210ENST00000484081 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
CUL3-210ENST00000484081 HRO43593 1189 aa11.82□□□□□ -0.52
CUL3-210ENST00000484081 TMUB1Q9BVT8 246 aa11.82□□□□□ -0.52
CUL3-210ENST00000484081 SMAPO00193 183 aa11.81□□□□□ -0.52
CUL3-210ENST00000484081 PARP9Q8IXQ6 854 aa11.8□□□□□ -0.52
CUL3-210ENST00000484081 REPIN1Q9BWE0 567 aaKnown RBP11.8□□□□□ -0.52
CUL3-210ENST00000484081 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
CUL3-210ENST00000484081 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.78□□□□□ -0.52
CUL3-210ENST00000484081 RCCD1A6NED2 376 aa11.78□□□□□ -0.52
CUL3-210ENST00000484081 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
CUL3-210ENST00000484081 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
CUL3-210ENST00000484081 GPBP1L1Q9HC44 474 aaPredicted RBP11.77□□□□□ -0.53
CUL3-210ENST00000484081 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
CUL3-210ENST00000484081 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
CUL3-210ENST00000484081 DNAJB2P25686 324 aa11.75□□□□□ -0.53
CUL3-210ENST00000484081 MDM2Q00987 491 aaPredicted RBP11.75□□□□□ -0.53
CUL3-210ENST00000484081 LAPTM4BQ86VI4 370 aa11.75□□□□□ -0.53
CUL3-210ENST00000484081 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
CUL3-210ENST00000484081 TMEM134Q9H6X4 195 aa11.75□□□□□ -0.53
CUL3-210ENST00000484081 CLCN1P35523 988 aa11.74□□□□□ -0.53
CUL3-210ENST00000484081 FAM98CQ17RN3 349 aaKnown RBP11.74□□□□□ -0.53
CUL3-210ENST00000484081 KDM4CQ9H3R0 1056 aa11.74□□□□□ -0.53
CUL3-210ENST00000484081 GPCPD1Q9NPB8 672 aa11.74□□□□□ -0.53
CUL3-210ENST00000484081 TTLL12Q14166 644 aaPredicted RBP11.73□□□□□ -0.53
CUL3-210ENST00000484081 GIGYF2Q6Y7W6 1299 aaKnown RBP11.73□□□□□ -0.53
CUL3-210ENST00000484081 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
CUL3-210ENST00000484081 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms