RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 MYO15BQ96JP2 1530 aa12.4□□□□□ -0.42
RIF1-210ENST00000484077 KCNK17Q96T54 332 aa12.39□□□□□ -0.43
RIF1-210ENST00000484077 PLSCR2Q9NRY7 297 aa12.39□□□□□ -0.43
RIF1-210ENST00000484077 ANKRD13DQ6ZTN6 518 aa12.38□□□□□ -0.43
RIF1-210ENST00000484077 DDX12PQ92771 950 aa12.38□□□□□ -0.43
RIF1-210ENST00000484077 PSEN2P49810 448 aa12.37□□□□□ -0.43
RIF1-210ENST00000484077 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
RIF1-210ENST00000484077 DCAF1Q9Y4B6 1507 aa12.36□□□□□ -0.43
RIF1-210ENST00000484077 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
RIF1-210ENST00000484077 NBR1Q14596 966 aa12.35□□□□□ -0.43
RIF1-210ENST00000484077 ADGRD1Q6QNK2 874 aa12.35□□□□□ -0.43
RIF1-210ENST00000484077 EN1Q05925 392 aaPredicted RBP12.34□□□□□ -0.43
RIF1-210ENST00000484077 MMRN1Q13201 1228 aa12.34□□□□□ -0.43
RIF1-210ENST00000484077 DMRTA1Q5VZB9 504 aa12.34□□□□□ -0.43
RIF1-210ENST00000484077 UNC13AQ9UPW8 1703 aa12.33□□□□□ -0.44
RIF1-210ENST00000484077 C6orf132Q5T0Z8 1188 aa12.32□□□□□ -0.44
RIF1-210ENST00000484077 GRXCR2A6NFK2 248 aa12.31□□□□□ -0.44
RIF1-210ENST00000484077 ZBED2Q9BTP6 218 aa12.31□□□□□ -0.44
RIF1-210ENST00000484077 MYT1LQ9UL68 1186 aa12.29□□□□□ -0.44
RIF1-210ENST00000484077 VPS9D1Q9Y2B5 631 aa12.29□□□□□ -0.44
RIF1-210ENST00000484077 MAP3K7O43318 606 aa12.28□□□□□ -0.44
RIF1-210ENST00000484077 HRO43593 1189 aa12.28□□□□□ -0.44
RIF1-210ENST00000484077 ONECUT3O60422 494 aaPredicted RBP12.28□□□□□ -0.44
RIF1-210ENST00000484077 OSBPP22059 807 aa12.28□□□□□ -0.44
RIF1-210ENST00000484077 CERKQ8TCT0 537 aa12.28□□□□□ -0.44
RIF1-210ENST00000484077 RBM33Q96EV2 1170 aaKnown RBP12.26□□□□□ -0.45
RIF1-210ENST00000484077 COL9A1P20849 921 aa12.24□□□□□ -0.45
RIF1-210ENST00000484077 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
RIF1-210ENST00000484077 STAC3Q96MF2 364 aa12.23□□□□□ -0.45
RIF1-210ENST00000484077 SMYD5Q6GMV2 418 aa12.22□□□□□ -0.45
RIF1-210ENST00000484077 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
RIF1-210ENST00000484077 RABGEF1Q9UJ41 708 aa12.22□□□□□ -0.45
RIF1-210ENST00000484077 BHMG1C9JSJ3 638 aaPredicted RBP12.21□□□□□ -0.45
RIF1-210ENST00000484077 MLLT3P42568 568 aaPredicted RBP12.21□□□□□ -0.45
RIF1-210ENST00000484077 TESPA1A2RU30 521 aaPredicted RBP12.2□□□□□ -0.46
RIF1-210ENST00000484077 SEMA3EO15041 775 aa12.2□□□□□ -0.46
RIF1-210ENST00000484077 TSR1Q2NL82 804 aaKnown RBP12.2□□□□□ -0.46
RIF1-210ENST00000484077 PRIM1P49642 420 aaKnown RBP12.19□□□□□ -0.46
RIF1-210ENST00000484077 RBM27Q9P2N5 1060 aaKnown RBP12.19□□□□□ -0.46
RIF1-210ENST00000484077 TRIM6-TRIM34B2RNG4 842 aa12.17□□□□□ -0.46
RIF1-210ENST00000484077 SCRIBQ14160 1630 aa12.16□□□□□ -0.46
RIF1-210ENST00000484077 LAPTM4BQ86VI4 370 aa12.16□□□□□ -0.46
RIF1-210ENST00000484077 PROX2Q3B8N5 592 aa12.15□□□□□ -0.46
RIF1-210ENST00000484077 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.46
RIF1-210ENST00000484077 PRSS12P56730 875 aa12.14□□□□□ -0.47
RIF1-210ENST00000484077 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
RIF1-210ENST00000484077 PACS2Q86VP3 889 aa12.13□□□□□ -0.47
RIF1-210ENST00000484077 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
RIF1-210ENST00000484077 KIAA1468Q9P260 1216 aa12.12□□□□□ -0.47
RIF1-210ENST00000484077 CDHR5Q9HBB8 845 aa12.11□□□□□ -0.47
RIF1-210ENST00000484077 GOLGA8CPA6NN73 597 aa12.1□□□□□ -0.47
RIF1-210ENST00000484077 NPDC1Q9NQX5 325 aaPredicted RBP12.1□□□□□ -0.47
RIF1-210ENST00000484077 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
RIF1-210ENST00000484077 TSKSQ9UJT2 592 aa12.09□□□□□ -0.47
RIF1-210ENST00000484077 PTGDRQ13258 359 aa12.07□□□□□ -0.48
RIF1-210ENST00000484077 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
RIF1-210ENST00000484077 FAM98CQ17RN3 349 aaKnown RBP12.06□□□□□ -0.48
RIF1-210ENST00000484077 TTC13Q8NBP0 860 aa12.06□□□□□ -0.48
RIF1-210ENST00000484077 HCSTQ9UBK5 93 aa12.06□□□□□ -0.48
RIF1-210ENST00000484077 NUTM2FA1L443 756 aa12.05□□□□□ -0.48
RIF1-210ENST00000484077 FCHSD2O94868 740 aa12.05□□□□□ -0.48
RIF1-210ENST00000484077 SHROOM4Q9ULL8 1493 aa12.04□□□□□ -0.48
RIF1-210ENST00000484077 KCTD12Q96CX2 325 aaKnown RBP12.04□□□□□ -0.48
RIF1-210ENST00000484077 ANKK1Q8NFD2 765 aa12.03□□□□□ -0.48
RIF1-210ENST00000484077 WNT2BQ93097 391 aa12.03□□□□□ -0.48
RIF1-210ENST00000484077 PADI6Q6TGC4 694 aa12.01□□□□□ -0.49
RIF1-210ENST00000484077 THSD4Q6ZMP0 1018 aa12.01□□□□□ -0.49
RIF1-210ENST00000484077 TATDN2Q93075 761 aa12.01□□□□□ -0.49
RIF1-210ENST00000484077 ZFRQ96KR1 1074 aaKnown RBP12.01□□□□□ -0.49
RIF1-210ENST00000484077 FAM198AQ9UFP1 575 aa12.01□□□□□ -0.49
RIF1-210ENST00000484077 HIC1Q14526 733 aa12□□□□□ -0.49
RIF1-210ENST00000484077 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
RIF1-210ENST00000484077 SEPT9Q9UHD8 586 aaPredicted RBP12□□□□□ -0.49
RIF1-210ENST00000484077 PNMA3Q9UL41 463 aa11.99□□□□□ -0.49
RIF1-210ENST00000484077 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
RIF1-210ENST00000484077 SOWAHBA6NEL2 793 aa11.96□□□□□ -0.49
RIF1-210ENST00000484077 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.49
RIF1-210ENST00000484077 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
RIF1-210ENST00000484077 GPIHBP1Q8IV16 184 aa11.94□□□□□ -0.5
RIF1-210ENST00000484077 GNPATO15228 680 aa11.93□□□□□ -0.5
RIF1-210ENST00000484077 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
RIF1-210ENST00000484077 LRCH3Q96II8 777 aa11.93□□□□□ -0.5
RIF1-210ENST00000484077 GPR37O15354 613 aa11.92□□□□□ -0.5
RIF1-210ENST00000484077 RBM46Q8TBY0 533 aaKnown RBP11.92□□□□□ -0.5
RIF1-210ENST00000484077 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.92□□□□□ -0.5
RIF1-210ENST00000484077 SMAPO00193 183 aa11.91□□□□□ -0.5
RIF1-210ENST00000484077 EYA1Q99502 592 aa11.91□□□□□ -0.5
RIF1-210ENST00000484077 C3orf80F5H4A9 247 aa11.9□□□□□ -0.5
RIF1-210ENST00000484077 PTPN5P54829 565 aa11.9□□□□□ -0.5
RIF1-210ENST00000484077 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
RIF1-210ENST00000484077 ADGRG1Q9Y653 693 aa11.9□□□□□ -0.5
RIF1-210ENST00000484077 OATP04181 439 aa11.89□□□□□ -0.51
RIF1-210ENST00000484077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.51
RIF1-210ENST00000484077 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
RIF1-210ENST00000484077 BCAMP50895 628 aa11.87□□□□□ -0.51
RIF1-210ENST00000484077 DNAJB2P25686 324 aa11.86□□□□□ -0.51
RIF1-210ENST00000484077 SLC4A3P48751 1232 aa11.86□□□□□ -0.51
RIF1-210ENST00000484077 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
RIF1-210ENST00000484077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
RIF1-210ENST00000484077 SLF2Q8IX21 1173 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms