RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 GPHNQ9NQX3 736 aaPredicted RBP10.68□□□□□ -0.7
SEMA3D-204ENST00000484038 NCKAP5LQ9HCH0 1330 aa10.68□□□□□ -0.7
SEMA3D-204ENST00000484038 KIF3CO14782 793 aa10.67□□□□□ -0.7
SEMA3D-204ENST00000484038 CRISPLD2Q9H0B8 497 aa10.67□□□□□ -0.7
SEMA3D-204ENST00000484038 ABCC10Q5T3U5 1492 aa10.67□□□□□ -0.7
SEMA3D-204ENST00000484038 MAPKBP1O60336 1514 aa10.66□□□□□ -0.7
SEMA3D-204ENST00000484038 ADCY10Q96PN6 1610 aa10.66□□□□□ -0.7
SEMA3D-204ENST00000484038 DIP2BQ9P265 1576 aa10.66□□□□□ -0.7
SEMA3D-204ENST00000484038 SNPHO15079 494 aa10.65□□□□□ -0.7
SEMA3D-204ENST00000484038 DDX27Q96GQ7 796 aaKnown RBP10.64□□□□□ -0.71
SEMA3D-204ENST00000484038 DSG2Q14126 1118 aa10.63□□□□□ -0.71
SEMA3D-204ENST00000484038 PPP1R15BQ5SWA1 713 aa10.63□□□□□ -0.71
SEMA3D-204ENST00000484038 KDM6BO15054 1643 aa10.63□□□□□ -0.71
SEMA3D-204ENST00000484038 FOXK1P85037 733 aa10.63□□□□□ -0.71
SEMA3D-204ENST00000484038 PLPP6Q8IY26 295 aa10.63□□□□□ -0.71
SEMA3D-204ENST00000484038 WDR70Q9NW82 654 aa10.63□□□□□ -0.71
SEMA3D-204ENST00000484038 DOK7Q18PE1 504 aa10.62□□□□□ -0.71
SEMA3D-204ENST00000484038 ZNF710Q8N1W2 664 aa10.62□□□□□ -0.71
SEMA3D-204ENST00000484038 TSPOAP1O95153 1857 aa10.61□□□□□ -0.71
SEMA3D-204ENST00000484038 FAM163AQ96GL9 167 aaPredicted RBP10.6□□□□□ -0.71
SEMA3D-204ENST00000484038 RIMBP2O15034 1052 aa10.59□□□□□ -0.71
SEMA3D-204ENST00000484038 KIAA0586Q9BVV6 1533 aa10.59□□□□□ -0.71
SEMA3D-204ENST00000484038 CUL7Q14999 1698 aa10.58□□□□□ -0.72
SEMA3D-204ENST00000484038 TTBK1Q5TCY1 1321 aaPredicted RBP10.57□□□□□ -0.72
SEMA3D-204ENST00000484038 MFSD10Q14728 455 aa10.57□□□□□ -0.72
SEMA3D-204ENST00000484038 KDM4FA0A1W2PPD8 638 aa10.56□□□□□ -0.72
SEMA3D-204ENST00000484038 HOXB3P14651 431 aaPredicted RBP10.56□□□□□ -0.72
SEMA3D-204ENST00000484038 KIF27Q86VH2 1401 aa10.56□□□□□ -0.72
SEMA3D-204ENST00000484038 IGF1RP08069 1367 aa10.54□□□□□ -0.72
SEMA3D-204ENST00000484038 PTPRGP23470 1445 aa10.54□□□□□ -0.72
SEMA3D-204ENST00000484038 UPF1Q92900 1129 aaKnown RBP eCLIP10.53□□□□□ -0.72
SEMA3D-204ENST00000484038 ST18O60284 1047 aa10.52□□□□□ -0.73
SEMA3D-204ENST00000484038 ABCC2Q92887 1545 aa10.51□□□□□ -0.73
SEMA3D-204ENST00000484038 CARMIL2Q6F5E8 1435 aa10.51□□□□□ -0.73
SEMA3D-204ENST00000484038 ASXL2Q76L83 1435 aa10.5□□□□□ -0.73
SEMA3D-204ENST00000484038 IQGAP2Q13576 1575 aa10.5□□□□□ -0.73
SEMA3D-204ENST00000484038 TNIKQ9UKE5 1360 aa10.5□□□□□ -0.73
SEMA3D-204ENST00000484038 PPRC1Q5VV67 1664 aaKnown RBP10.49□□□□□ -0.73
SEMA3D-204ENST00000484038 CARMIL1Q5VZK9 1371 aa10.49□□□□□ -0.73
SEMA3D-204ENST00000484038 SLC34A2O95436 690 aa10.48□□□□□ -0.73
SEMA3D-204ENST00000484038 E2F4Q16254 413 aa10.48□□□□□ -0.73
SEMA3D-204ENST00000484038 ARSIQ5FYB1 569 aa10.48□□□□□ -0.73
SEMA3D-204ENST00000484038 ZSWIM6Q9HCJ5 1215 aa10.48□□□□□ -0.73
SEMA3D-204ENST00000484038 PCDHGA4Q9Y5G9 962 aa10.48□□□□□ -0.73
SEMA3D-204ENST00000484038 PLB1Q6P1J6 1458 aa10.48□□□□□ -0.73
SEMA3D-204ENST00000484038 TBC1D12O60347 775 aa10.48□□□□□ -0.73
SEMA3D-204ENST00000484038 ADGRL1O94910 1474 aa10.47□□□□□ -0.73
SEMA3D-204ENST00000484038 GLI2P10070 1586 aa10.47□□□□□ -0.73
SEMA3D-204ENST00000484038 VSIG10Q8N0Z9 540 aa10.46□□□□□ -0.74
SEMA3D-204ENST00000484038 KHSRPQ92945 711 aaKnown RBP eCLIP10.46□□□□□ -0.74
SEMA3D-204ENST00000484038 MAP3K9P80192 1104 aa10.45□□□□□ -0.74
SEMA3D-204ENST00000484038 PTCD2Q8WV60 388 aaKnown RBP10.45□□□□□ -0.74
SEMA3D-204ENST00000484038 MARVELD3Q96A59 401 aa10.45□□□□□ -0.74
SEMA3D-204ENST00000484038 EMILIN3Q9NT22 766 aa10.45□□□□□ -0.74
SEMA3D-204ENST00000484038 UACAQ9BZF9 1416 aa10.45□□□□□ -0.74
SEMA3D-204ENST00000484038 UHRF1BP1LA0JNW5 1464 aa10.45□□□□□ -0.74
SEMA3D-204ENST00000484038 NUDT7P0C024 238 aa10.44□□□□□ -0.74
SEMA3D-204ENST00000484038 HOXB1P14653 301 aaPredicted RBP10.44□□□□□ -0.74
SEMA3D-204ENST00000484038 EMP3P54852 163 aa10.44□□□□□ -0.74
SEMA3D-204ENST00000484038 KDM2AQ9Y2K7 1162 aa10.44□□□□□ -0.74
SEMA3D-204ENST00000484038 MAP3K4Q9Y6R4 1608 aa10.44□□□□□ -0.74
SEMA3D-204ENST00000484038 DISP1Q96F81 1524 aa10.44□□□□□ -0.74
SEMA3D-204ENST00000484038 CAMK2BQ13554 666 aa10.43□□□□□ -0.74
SEMA3D-204ENST00000484038 GPR153Q6NV75 609 aa10.43□□□□□ -0.74
SEMA3D-204ENST00000484038 OXER1Q8TDS5 423 aa10.43□□□□□ -0.74
SEMA3D-204ENST00000484038 ZCCHC11Q5TAX3 1644 aaKnown RBP10.43□□□□□ -0.74
SEMA3D-204ENST00000484038 EPRSP07814 1512 aaKnown RBP10.43□□□□□ -0.74
SEMA3D-204ENST00000484038 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
SEMA3D-204ENST00000484038 LCE2DQ5TA82 110 aaPredicted RBP10.43□□□□□ -0.74
SEMA3D-204ENST00000484038 TEX14Q8IWB6 1497 aa10.42□□□□□ -0.74
SEMA3D-204ENST00000484038 DPYSL4O14531 572 aa10.42□□□□□ -0.74
SEMA3D-204ENST00000484038 KDM5BQ9UGL1 1544 aa10.42□□□□□ -0.74
SEMA3D-204ENST00000484038 COL17A1Q9UMD9 1497 aaPredicted RBP10.41□□□□□ -0.74
SEMA3D-204ENST00000484038 P3H3Q8IVL6 736 aa10.41□□□□□ -0.74
SEMA3D-204ENST00000484038 KIAA0556O60303 1618 aa10.4□□□□□ -0.74
SEMA3D-204ENST00000484038 HECW2Q9P2P5 1572 aa10.4□□□□□ -0.74
SEMA3D-204ENST00000484038 SLC24A1O60721 1099 aa10.4□□□□□ -0.74
SEMA3D-204ENST00000484038 UGGT2Q9NYU1 1516 aa10.39□□□□□ -0.75
SEMA3D-204ENST00000484038 ERBB3P21860 1342 aa10.39□□□□□ -0.75
SEMA3D-204ENST00000484038 RAPGEF2Q9Y4G8 1499 aa10.39□□□□□ -0.75
SEMA3D-204ENST00000484038 KCNV2Q8TDN2 545 aa10.38□□□□□ -0.75
SEMA3D-204ENST00000484038 FAM205CA6NFA0 338 aa10.38□□□□□ -0.75
SEMA3D-204ENST00000484038 EVI5O60447 810 aa10.38□□□□□ -0.75
SEMA3D-204ENST00000484038 WDR7Q9Y4E6 1490 aa10.37□□□□□ -0.75
SEMA3D-204ENST00000484038 POTEMA6NI47 508 aa10.36□□□□□ -0.75
SEMA3D-204ENST00000484038 POTEGQ6S5H5 508 aa10.36□□□□□ -0.75
SEMA3D-204ENST00000484038 LHX6Q9UPM6 363 aa10.34□□□□□ -0.75
SEMA3D-204ENST00000484038 CTTNBP2Q8WZ74 1663 aa10.34□□□□□ -0.75
SEMA3D-204ENST00000484038 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
SEMA3D-204ENST00000484038 CFAP43Q8NDM7 1665 aa10.33□□□□□ -0.76
SEMA3D-204ENST00000484038 CD109Q6YHK3 1445 aa10.32□□□□□ -0.76
SEMA3D-204ENST00000484038 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
SEMA3D-204ENST00000484038 HS3ST6Q96QI5 342 aa10.32□□□□□ -0.76
SEMA3D-204ENST00000484038 KIF21BO75037 1637 aa10.31□□□□□ -0.76
SEMA3D-204ENST00000484038 MAGI3Q5TCQ9 1506 aa10.31□□□□□ -0.76
SEMA3D-204ENST00000484038 KCNH8Q96L42 1107 aa10.31□□□□□ -0.76
SEMA3D-204ENST00000484038 GOLGA3Q08378 1498 aa10.31□□□□□ -0.76
SEMA3D-204ENST00000484038 ABCA8O94911 1581 aa10.3□□□□□ -0.76
SEMA3D-204ENST00000484038 PDIA6Q15084 440 aa10.29□□□□□ -0.76
SEMA3D-204ENST00000484038 SPDYE16A6NNV3 312 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms