RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 HMMRO75330 724 aa12.6□□□□□ -0.39
COL12A1-207ENST00000483888 MCTP1Q6DN14 999 aa12.6□□□□□ -0.39
COL12A1-207ENST00000483888 TRAK2O60296 914 aa12.59□□□□□ -0.39
COL12A1-207ENST00000483888 DYDC1Q8WWB3 177 aa12.59□□□□□ -0.39
COL12A1-207ENST00000483888 CCDC34Q96HJ3 373 aa12.59□□□□□ -0.39
COL12A1-207ENST00000483888 STAG3Q9UJ98 1225 aa12.59□□□□□ -0.39
COL12A1-207ENST00000483888 SKIDA1Q1XH10 827 aa12.59□□□□□ -0.39
COL12A1-207ENST00000483888 CBX1P83916 185 aa12.59□□□□□ -0.39
COL12A1-207ENST00000483888 CDR1P51861 262 aa12.59□□□□□ -0.39
COL12A1-207ENST00000483888 ZNF526Q8TF50 670 aaPredicted RBP12.58□□□□□ -0.39
COL12A1-207ENST00000483888 FRAT2O75474 233 aaPredicted RBP12.58□□□□□ -0.4
COL12A1-207ENST00000483888 DCTN1Q14203 1278 aa12.58□□□□□ -0.4
COL12A1-207ENST00000483888 KIF3AQ9Y496 699 aa12.58□□□□□ -0.4
COL12A1-207ENST00000483888 MTUS2Q5JR59 1369 aa12.58□□□□□ -0.4
COL12A1-207ENST00000483888 IPO8O15397 1037 aaKnown RBP12.58□□□□□ -0.4
COL12A1-207ENST00000483888 ATP6V1DQ9Y5K8 247 aa12.58□□□□□ -0.4
COL12A1-207ENST00000483888 TPM1P09493 284 aa12.57□□□□□ -0.4
COL12A1-207ENST00000483888 ESPNB1AK53 854 aa12.57□□□□□ -0.4
COL12A1-207ENST00000483888 NEFHP12036 1026 aa12.56□□□□□ -0.4
COL12A1-207ENST00000483888 CALCOCO1Q9P1Z2 691 aa12.56□□□□□ -0.4
COL12A1-207ENST00000483888 KIAA0754O94854 1291 aa12.56□□□□□ -0.4
COL12A1-207ENST00000483888 TNNT1P13805 278 aa12.56□□□□□ -0.4
COL12A1-207ENST00000483888 PES1O00541 588 aaKnown RBP12.55□□□□□ -0.4
COL12A1-207ENST00000483888 KTN1Q86UP2 1357 aaKnown RBP12.55□□□□□ -0.4
COL12A1-207ENST00000483888 TRIM6-TRIM34B2RNG4 842 aa12.55□□□□□ -0.4
COL12A1-207ENST00000483888 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
COL12A1-207ENST00000483888 EXOC6Q8TAG9 804 aa12.54□□□□□ -0.4
COL12A1-207ENST00000483888 RRP1P56182 461 aaKnown RBP12.54□□□□□ -0.4
COL12A1-207ENST00000483888 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
COL12A1-207ENST00000483888 ERCC4Q92889 916 aaPredicted RBP12.54□□□□□ -0.4
COL12A1-207ENST00000483888 PDCL2Q8N4E4 241 aa12.54□□□□□ -0.4
COL12A1-207ENST00000483888 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
COL12A1-207ENST00000483888 SF3A1Q15459 793 aaKnown RBP12.53□□□□□ -0.4
COL12A1-207ENST00000483888 GRPEL1Q9HAV7 217 aa12.53□□□□□ -0.4
COL12A1-207ENST00000483888 HOMEZQ8IX15 550 aa12.53□□□□□ -0.4
COL12A1-207ENST00000483888 GORABQ5T7V8 394 aa12.53□□□□□ -0.4
COL12A1-207ENST00000483888 RSPH4AQ5TD94 716 aa12.53□□□□□ -0.4
COL12A1-207ENST00000483888 C14orf37Q86TY3 774 aa12.53□□□□□ -0.4
COL12A1-207ENST00000483888 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
COL12A1-207ENST00000483888 HSPA5P11021 654 aaKnown RBP12.53□□□□□ -0.4
COL12A1-207ENST00000483888 NPHP1O15259 732 aa12.52□□□□□ -0.4
COL12A1-207ENST00000483888 RGL3Q3MIN7 710 aa12.52□□□□□ -0.4
COL12A1-207ENST00000483888 GOLGA3Q08378 1498 aa12.52□□□□□ -0.4
COL12A1-207ENST00000483888 GTF2A1P52655 376 aaPredicted RBP12.52□□□□□ -0.41
COL12A1-207ENST00000483888 RNF214Q8ND24 703 aa12.52□□□□□ -0.41
COL12A1-207ENST00000483888 IPO4Q8TEX9 1081 aaKnown RBP12.52□□□□□ -0.41
COL12A1-207ENST00000483888 CHMP3Q9Y3E7 222 aa12.52□□□□□ -0.41
COL12A1-207ENST00000483888 ZBED9Q6R2W3 1325 aa12.51□□□□□ -0.41
COL12A1-207ENST00000483888 CEP89Q96ST8 783 aa12.51□□□□□ -0.41
COL12A1-207ENST00000483888 CRBNQ96SW2 442 aa12.51□□□□□ -0.41
COL12A1-207ENST00000483888 H3BQV1 296 aa12.51□□□□□ -0.41
COL12A1-207ENST00000483888 IFFO2Q5TF58 517 aa12.51□□□□□ -0.41
COL12A1-207ENST00000483888 CAVIN1Q6NZI2 390 aaKnown RBP12.5□□□□□ -0.41
COL12A1-207ENST00000483888 AXDND1Q5T1B0 1012 aaPredicted RBP12.5□□□□□ -0.41
COL12A1-207ENST00000483888 TRERF1Q96PN7 1200 aa12.5□□□□□ -0.41
COL12A1-207ENST00000483888 CENPHQ9H3R5 247 aa12.5□□□□□ -0.41
COL12A1-207ENST00000483888 ZCCHC6Q5VYS8 1495 aaKnown RBP12.5□□□□□ -0.41
COL12A1-207ENST00000483888 PLIN1O60240 522 aa12.5□□□□□ -0.41
COL12A1-207ENST00000483888 MSH5O43196 834 aa12.49□□□□□ -0.41
COL12A1-207ENST00000483888 DHX37Q8IY37 1157 aaKnown RBP12.49□□□□□ -0.41
COL12A1-207ENST00000483888 NUCB2P80303 420 aa12.49□□□□□ -0.41
COL12A1-207ENST00000483888 SASS6Q6UVJ0 657 aa12.49□□□□□ -0.41
COL12A1-207ENST00000483888 PDE3BQ13370 1112 aa12.49□□□□□ -0.41
COL12A1-207ENST00000483888 RALBP1Q15311 655 aa12.48□□□□□ -0.41
COL12A1-207ENST00000483888 TIGD1Q96MW7 591 aa12.48□□□□□ -0.41
COL12A1-207ENST00000483888 INCENPQ9NQS7 918 aa12.48□□□□□ -0.41
COL12A1-207ENST00000483888 IPO7O95373 1038 aaKnown RBP12.48□□□□□ -0.41
COL12A1-207ENST00000483888 TSPY26PQ9H489 355 aa12.47□□□□□ -0.41
COL12A1-207ENST00000483888 CCDC112Q8NEF3 446 aa12.46□□□□□ -0.41
COL12A1-207ENST00000483888 CT47B1P0C2W7 299 aaPredicted RBP12.46□□□□□ -0.41
COL12A1-207ENST00000483888 CENPJQ9HC77 1338 aaPredicted RBP12.46□□□□□ -0.41
COL12A1-207ENST00000483888 GOLGA2Q08379 1002 aa12.46□□□□□ -0.42
COL12A1-207ENST00000483888 FBLN2P98095 1184 aa12.46□□□□□ -0.42
COL12A1-207ENST00000483888 SPC24Q8NBT2 197 aa12.45□□□□□ -0.42
COL12A1-207ENST00000483888 SMC4Q9NTJ3 1288 aa12.45□□□□□ -0.42
COL12A1-207ENST00000483888 RASSF8Q8NHQ8 419 aa12.45□□□□□ -0.42
COL12A1-207ENST00000483888 PRM3Q9NNZ6 103 aa12.45□□□□□ -0.42
COL12A1-207ENST00000483888 ISY1Q9ULR0 285 aaKnown RBP12.45□□□□□ -0.42
COL12A1-207ENST00000483888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
COL12A1-207ENST00000483888 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
COL12A1-207ENST00000483888 TSPY4P0CV99 314 aa12.45□□□□□ -0.42
COL12A1-207ENST00000483888 TSPY10P0CW01 314 aa12.45□□□□□ -0.42
COL12A1-207ENST00000483888 TICAM2Q86XR7 235 aa12.44□□□□□ -0.42
COL12A1-207ENST00000483888 TMF1P82094 1093 aa12.44□□□□□ -0.42
COL12A1-207ENST00000483888 EIF3JO75822 258 aaKnown RBP12.44□□□□□ -0.42
COL12A1-207ENST00000483888 GPATCH3Q96I76 525 aa12.44□□□□□ -0.42
COL12A1-207ENST00000483888 GOLGA6L7A0A1B0GV03 622 aa12.44□□□□□ -0.42
COL12A1-207ENST00000483888 LETM1O95202 739 aaPredicted RBP12.44□□□□□ -0.42
COL12A1-207ENST00000483888 ZSCAN30Q86W11 494 aa12.44□□□□□ -0.42
COL12A1-207ENST00000483888 CAGE1Q8TC20 777 aa12.44□□□□□ -0.42
COL12A1-207ENST00000483888 FBXW7Q969H0 707 aa12.44□□□□□ -0.42
COL12A1-207ENST00000483888 ZRSR2Q15696 482 aaKnown RBP12.44□□□□□ -0.42
COL12A1-207ENST00000483888 TTLL5Q6EMB2 1281 aa12.43□□□□□ -0.42
COL12A1-207ENST00000483888 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
COL12A1-207ENST00000483888 BICD2Q8TD16 824 aa12.43□□□□□ -0.42
COL12A1-207ENST00000483888 TRIM5Q9C035 493 aa12.43□□□□□ -0.42
COL12A1-207ENST00000483888 DDX11Q96FC9 970 aa12.43□□□□□ -0.42
COL12A1-207ENST00000483888 FAM184AQ8NB25 1140 aa12.43□□□□□ -0.42
COL12A1-207ENST00000483888 C22orf23Q9BZE7 217 aa12.42□□□□□ -0.42
COL12A1-207ENST00000483888 CCNB3Q8WWL7 1395 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms