RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 TJAP1Q5JTD0 557 aa8.46□□□□□ -1.06
PKP4-212ENST00000483881 TSR3Q9UJK0 312 aaKnown RBP8.46□□□□□ -1.06
PKP4-212ENST00000483881 JPH4Q96JJ6 628 aa8.44□□□□□ -1.06
PKP4-212ENST00000483881 HPS5Q9UPZ3 1129 aa8.44□□□□□ -1.06
PKP4-212ENST00000483881 PPP1R3GB7ZBB8 358 aa8.43□□□□□ -1.06
PKP4-212ENST00000483881 COL9A1P20849 921 aa8.43□□□□□ -1.06
PKP4-212ENST00000483881 TRIM67Q6ZTA4 783 aa8.43□□□□□ -1.06
PKP4-212ENST00000483881 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.43□□□□□ -1.06
PKP4-212ENST00000483881 KIAA1468Q9P260 1216 aa8.43□□□□□ -1.06
PKP4-212ENST00000483881 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
PKP4-212ENST00000483881 PKDCCQ504Y2 493 aa8.41□□□□□ -1.06
PKP4-212ENST00000483881 STK25O00506 426 aa8.4□□□□□ -1.06
PKP4-212ENST00000483881 WFS1O76024 890 aa8.4□□□□□ -1.06
PKP4-212ENST00000483881 SEPT9Q9UHD8 586 aaPredicted RBP8.4□□□□□ -1.06
PKP4-212ENST00000483881 DGAT1O75907 488 aa8.39□□□□□ -1.07
PKP4-212ENST00000483881 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
PKP4-212ENST00000483881 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.39□□□□□ -1.07
PKP4-212ENST00000483881 WIPF1O43516 503 aa8.37□□□□□ -1.07
PKP4-212ENST00000483881 INSM1Q01101 510 aaPredicted RBP8.37□□□□□ -1.07
PKP4-212ENST00000483881 LRCH3Q96II8 777 aa8.36□□□□□ -1.07
PKP4-212ENST00000483881 TAOK2Q9UL54 1235 aa8.36□□□□□ -1.07
PKP4-212ENST00000483881 ZNF516Q92618 1163 aa8.35□□□□□ -1.07
PKP4-212ENST00000483881 MTRQ99707 1265 aa8.35□□□□□ -1.07
PKP4-212ENST00000483881 IL21Q9HBE4 155 aa8.34□□□□□ -1.07
PKP4-212ENST00000483881 EVI5O60447 810 aa8.32□□□□□ -1.08
PKP4-212ENST00000483881 NFX1Q12986 1120 aaKnown RBP8.32□□□□□ -1.08
PKP4-212ENST00000483881 FAM98CQ17RN3 349 aaKnown RBP8.32□□□□□ -1.08
PKP4-212ENST00000483881 ST8SIA5O15466 376 aa8.31□□□□□ -1.08
PKP4-212ENST00000483881 ONECUT3O60422 494 aaPredicted RBP8.31□□□□□ -1.08
PKP4-212ENST00000483881 PPP4CP60510 307 aa8.31□□□□□ -1.08
PKP4-212ENST00000483881 NKX2-3Q8TAU0 364 aa8.31□□□□□ -1.08
PKP4-212ENST00000483881 AAASQ9NRG9 546 aa8.29□□□□□ -1.08
PKP4-212ENST00000483881 PCDHGA10Q9Y5H3 936 aa8.29□□□□□ -1.08
PKP4-212ENST00000483881 LCE2CQ5TA81 110 aa8.28□□□□□ -1.08
PKP4-212ENST00000483881 FAM187AA6NFU0 413 aa8.26□□□□□ -1.09
PKP4-212ENST00000483881 EMID1Q96A84 441 aaPredicted RBP8.26□□□□□ -1.09
PKP4-212ENST00000483881 PRR20EP86478 221 aa8.25□□□□□ -1.09
PKP4-212ENST00000483881 PRR20CP86479 221 aa8.25□□□□□ -1.09
PKP4-212ENST00000483881 PRR20DP86480 221 aa8.25□□□□□ -1.09
PKP4-212ENST00000483881 PRR20BP86481 221 aa8.25□□□□□ -1.09
PKP4-212ENST00000483881 PRR20AP86496 221 aa8.25□□□□□ -1.09
PKP4-212ENST00000483881 TRIM6-TRIM34B2RNG4 842 aa8.23□□□□□ -1.09
PKP4-212ENST00000483881 SLC19A1P41440 591 aa8.23□□□□□ -1.09
PKP4-212ENST00000483881 DACH1Q9UI36 760 aa8.23□□□□□ -1.09
PKP4-212ENST00000483881 GGCXP38435 758 aa8.22□□□□□ -1.09
PKP4-212ENST00000483881 TMUB1Q9BVT8 246 aa8.21□□□□□ -1.1
PKP4-212ENST00000483881 PPP1R15BQ5SWA1 713 aa8.2□□□□□ -1.1
PKP4-212ENST00000483881 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
PKP4-212ENST00000483881 ZNF598Q86UK7 904 aaKnown RBP8.19□□□□□ -1.1
PKP4-212ENST00000483881 GMPR2Q9P2T1 348 aaKnown RBP8.19□□□□□ -1.1
PKP4-212ENST00000483881 TYW1BQ6NUM6 668 aa8.18□□□□□ -1.1
PKP4-212ENST00000483881 C11orf95C9JLR9 678 aaPredicted RBP8.17□□□□□ -1.1
PKP4-212ENST00000483881 TNFRSF10AO00220 468 aa8.17□□□□□ -1.1
PKP4-212ENST00000483881 GDF9O60383 454 aa8.17□□□□□ -1.1
PKP4-212ENST00000483881 FBXW7Q969H0 707 aa8.17□□□□□ -1.1
PKP4-212ENST00000483881 C6orf132Q5T0Z8 1188 aa8.16□□□□□ -1.1
PKP4-212ENST00000483881 SAMD7Q7Z3H4 446 aa8.16□□□□□ -1.1
PKP4-212ENST00000483881 CRISPLD2Q9H0B8 497 aa8.16□□□□□ -1.1
PKP4-212ENST00000483881 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
PKP4-212ENST00000483881 PHF14O94880 888 aa8.13□□□□□ -1.11
PKP4-212ENST00000483881 APLP1P51693 650 aa8.13□□□□□ -1.11
PKP4-212ENST00000483881 MAP3K9P80192 1104 aa8.13□□□□□ -1.11
PKP4-212ENST00000483881 FAM181BA6NEQ2 426 aa8.12□□□□□ -1.11
PKP4-212ENST00000483881 ZNF697Q5TEC3 545 aa8.12□□□□□ -1.11
PKP4-212ENST00000483881 CRIPAKQ8N1N5 446 aa8.11□□□□□ -1.11
PKP4-212ENST00000483881 TERTO14746 1132 aaKnown RBP8.1□□□□□ -1.11
PKP4-212ENST00000483881 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
PKP4-212ENST00000483881 COPS2P61201 443 aa8.1□□□□□ -1.11
PKP4-212ENST00000483881 LIAT1Q6ZQX7 453 aa8.1□□□□□ -1.11
PKP4-212ENST00000483881 TSKSQ9UJT2 592 aa8.1□□□□□ -1.11
PKP4-212ENST00000483881 PACS2Q86VP3 889 aa8.08□□□□□ -1.12
PKP4-212ENST00000483881 SMAPO00193 183 aa8.07□□□□□ -1.12
PKP4-212ENST00000483881 NCKAP5LQ9HCH0 1330 aa8.05□□□□□ -1.12
PKP4-212ENST00000483881 ZPR1O75312 459 aa8.05□□□□□ -1.12
PKP4-212ENST00000483881 PPEF1O14829 653 aaPredicted RBP8.04□□□□□ -1.12
PKP4-212ENST00000483881 ZSCAN1Q8NBB4 408 aa8.03□□□□□ -1.12
PKP4-212ENST00000483881 EMILIN3Q9NT22 766 aa8.03□□□□□ -1.12
PKP4-212ENST00000483881 AXIN1O15169 862 aa8.02□□□□□ -1.13
PKP4-212ENST00000483881 AVPP01185 164 aa8.02□□□□□ -1.13
PKP4-212ENST00000483881 RBM33Q96EV2 1170 aaKnown RBP8.02□□□□□ -1.13
PKP4-212ENST00000483881 C3orf80F5H4A9 247 aa8.01□□□□□ -1.13
PKP4-212ENST00000483881 RGL2O15211 777 aa8.01□□□□□ -1.13
PKP4-212ENST00000483881 SNRPBP14678 240 aaKnown RBP8.01□□□□□ -1.13
PKP4-212ENST00000483881 ANKLE1Q8NAG6 615 aa8.01□□□□□ -1.13
PKP4-212ENST00000483881 EPAS1Q99814 870 aa8.01□□□□□ -1.13
PKP4-212ENST00000483881 RNF40O75150 1001 aa8□□□□□ -1.13
PKP4-212ENST00000483881 PDE4AP27815 886 aa8□□□□□ -1.13
PKP4-212ENST00000483881 PKD2L1Q9P0L9 805 aa8□□□□□ -1.13
PKP4-212ENST00000483881 ECM2O94769 699 aaPredicted RBP7.99□□□□□ -1.13
PKP4-212ENST00000483881 KCTD17Q8N5Z5 321 aa7.99□□□□□ -1.13
PKP4-212ENST00000483881 FAM198AQ9UFP1 575 aa7.98□□□□□ -1.13
PKP4-212ENST00000483881 GMPRP36959 345 aa7.96□□□□□ -1.14
PKP4-212ENST00000483881 FOXC1Q12948 553 aa7.96□□□□□ -1.14
PKP4-212ENST00000483881 SMCPP49901 116 aaPredicted RBP7.95□□□□□ -1.14
PKP4-212ENST00000483881 CTC1Q2NKJ3 1217 aa7.95□□□□□ -1.14
PKP4-212ENST00000483881 KRTAP4-8Q9BYQ9 185 aa7.94□□□□□ -1.14
PKP4-212ENST00000483881 S1PR4O95977 384 aa7.93□□□□□ -1.14
PKP4-212ENST00000483881 PLA2G2CQ5R387 149 aa7.93□□□□□ -1.14
PKP4-212ENST00000483881 XP32Q5T750 250 aa7.93□□□□□ -1.14
PKP4-212ENST00000483881 TATDN2Q93075 761 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms