RNA–Protein interactions for RNA: ENST00000483859.6

SENP6-208, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-208ENST00000483859 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
SENP6-208ENST00000483859 ZFRQ96KR1 1074 aaKnown RBP9.83□□□□□ -0.84
SENP6-208ENST00000483859 MAP3K9P80192 1104 aa9.81□□□□□ -0.84
SENP6-208ENST00000483859 EMILIN3Q9NT22 766 aa9.8□□□□□ -0.84
SENP6-208ENST00000483859 LARP6Q9BRS8 491 aaKnown RBP9.79□□□□□ -0.84
SENP6-208ENST00000483859 PDE4AP27815 886 aa9.77□□□□□ -0.85
SENP6-208ENST00000483859 HPS5Q9UPZ3 1129 aa9.75□□□□□ -0.85
SENP6-208ENST00000483859 LAPTM4BQ86VI4 370 aa9.74□□□□□ -0.85
SENP6-208ENST00000483859 PRKD2Q9BZL6 878 aa9.74□□□□□ -0.85
SENP6-208ENST00000483859 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
SENP6-208ENST00000483859 LAPTM4AQ15012 233 aa9.72□□□□□ -0.85
SENP6-208ENST00000483859 TYW1BQ6NUM6 668 aa9.72□□□□□ -0.85
SENP6-208ENST00000483859 NYAP1Q6ZVC0 841 aa9.71□□□□□ -0.86
SENP6-208ENST00000483859 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.71□□□□□ -0.86
SENP6-208ENST00000483859 TSR3Q9UJK0 312 aaKnown RBP9.71□□□□□ -0.86
SENP6-208ENST00000483859 C6orf132Q5T0Z8 1188 aa9.7□□□□□ -0.86
SENP6-208ENST00000483859 RBM33Q96EV2 1170 aaKnown RBP9.7□□□□□ -0.86
SENP6-208ENST00000483859 ZNF787Q6DD87 383 aa9.69□□□□□ -0.86
SENP6-208ENST00000483859 TRIM6-TRIM34B2RNG4 842 aa9.68□□□□□ -0.86
SENP6-208ENST00000483859 PHF14O94880 888 aa9.68□□□□□ -0.86
SENP6-208ENST00000483859 LRCH3Q96II8 777 aa9.68□□□□□ -0.86
SENP6-208ENST00000483859 FAM98CQ17RN3 349 aaKnown RBP9.67□□□□□ -0.86
SENP6-208ENST00000483859 NRG2O14511 850 aaPredicted RBP9.66□□□□□ -0.86
SENP6-208ENST00000483859 TJAP1Q5JTD0 557 aa9.66□□□□□ -0.86
SENP6-208ENST00000483859 PPP1R18Q6NYC8 613 aa9.66□□□□□ -0.86
SENP6-208ENST00000483859 FBXW7Q969H0 707 aa9.66□□□□□ -0.86
SENP6-208ENST00000483859 ZNF775Q96BV0 537 aaPredicted RBP9.66□□□□□ -0.86
SENP6-208ENST00000483859 SMAPO00193 183 aa9.64□□□□□ -0.87
SENP6-208ENST00000483859 MFSD10Q14728 455 aa9.64□□□□□ -0.87
SENP6-208ENST00000483859 ZNF516Q92618 1163 aa9.63□□□□□ -0.87
SENP6-208ENST00000483859 DNAJC5Q9H3Z4 198 aa9.63□□□□□ -0.87
SENP6-208ENST00000483859 TSKSQ9UJT2 592 aa9.63□□□□□ -0.87
SENP6-208ENST00000483859 GTPBP6O43824 516 aaPredicted RBP9.62□□□□□ -0.87
SENP6-208ENST00000483859 ONECUT3O60422 494 aaPredicted RBP9.62□□□□□ -0.87
SENP6-208ENST00000483859 PPP4CP60510 307 aa9.62□□□□□ -0.87
SENP6-208ENST00000483859 CADPS2Q86UW7 1296 aa9.62□□□□□ -0.87
SENP6-208ENST00000483859 C3orf80F5H4A9 247 aa9.61□□□□□ -0.87
SENP6-208ENST00000483859 DDX12PQ92771 950 aa9.61□□□□□ -0.87
SENP6-208ENST00000483859 MTRQ99707 1265 aa9.61□□□□□ -0.87
SENP6-208ENST00000483859 DPYSL4O14531 572 aa9.59□□□□□ -0.87
SENP6-208ENST00000483859 TSR1Q2NL82 804 aaKnown RBP9.59□□□□□ -0.87
SENP6-208ENST00000483859 SAMD7Q7Z3H4 446 aa9.59□□□□□ -0.87
SENP6-208ENST00000483859 NKX2-3Q8TAU0 364 aa9.59□□□□□ -0.87
SENP6-208ENST00000483859 PDZRN3Q9UPQ7 1066 aa9.59□□□□□ -0.87
SENP6-208ENST00000483859 RYDENQ9NUL5 291 aaKnown RBP9.57□□□□□ -0.88
SENP6-208ENST00000483859 EPAS1Q99814 870 aa9.56□□□□□ -0.88
SENP6-208ENST00000483859 FAM198AQ9UFP1 575 aa9.56□□□□□ -0.88
SENP6-208ENST00000483859 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.55□□□□□ -0.88
SENP6-208ENST00000483859 POTECB2RU33 542 aa9.54□□□□□ -0.88
SENP6-208ENST00000483859 IL21Q9HBE4 155 aa9.54□□□□□ -0.88
SENP6-208ENST00000483859 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
SENP6-208ENST00000483859 PACS2Q86VP3 889 aa9.52□□□□□ -0.89
SENP6-208ENST00000483859 RNF40O75150 1001 aa9.51□□□□□ -0.89
SENP6-208ENST00000483859 MAP3K7O43318 606 aa9.5□□□□□ -0.89
SENP6-208ENST00000483859 APLP1P51693 650 aa9.5□□□□□ -0.89
SENP6-208ENST00000483859 NBR1Q14596 966 aa9.5□□□□□ -0.89
SENP6-208ENST00000483859 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
SENP6-208ENST00000483859 COPS2P61201 443 aa9.48□□□□□ -0.89
SENP6-208ENST00000483859 TRIM67Q6ZTA4 783 aa9.48□□□□□ -0.89
SENP6-208ENST00000483859 CDCA7LQ96GN5 454 aa9.48□□□□□ -0.89
SENP6-208ENST00000483859 EN1Q05925 392 aaPredicted RBP9.47□□□□□ -0.89
SENP6-208ENST00000483859 CAMK2BQ13554 666 aa9.46□□□□□ -0.9
SENP6-208ENST00000483859 PNMA3Q9UL41 463 aa9.46□□□□□ -0.9
SENP6-208ENST00000483859 EMID1Q96A84 441 aaPredicted RBP9.45□□□□□ -0.9
SENP6-208ENST00000483859 TATDN2Q93075 761 aa9.44□□□□□ -0.9
SENP6-208ENST00000483859 PRSS12P56730 875 aa9.42□□□□□ -0.9
SENP6-208ENST00000483859 MYT1Q01538 1121 aa9.42□□□□□ -0.9
SENP6-208ENST00000483859 NUDT18Q6ZVK8 323 aa9.41□□□□□ -0.9
SENP6-208ENST00000483859 CDHR5Q9HBB8 845 aa9.39□□□□□ -0.91
SENP6-208ENST00000483859 PKDCCQ504Y2 493 aa9.38□□□□□ -0.91
SENP6-208ENST00000483859 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
SENP6-208ENST00000483859 SLC19A1P41440 591 aa9.36□□□□□ -0.91
SENP6-208ENST00000483859 NBPF26B4DH59 902 aa9.35□□□□□ -0.91
SENP6-208ENST00000483859 RNF223E7ERA6 249 aa9.35□□□□□ -0.91
SENP6-208ENST00000483859 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
SENP6-208ENST00000483859 SWT1Q5T5J6 900 aaKnown RBP9.35□□□□□ -0.91
SENP6-208ENST00000483859 GRXCR2A6NFK2 248 aa9.34□□□□□ -0.91
SENP6-208ENST00000483859 TNFRSF10AO00220 468 aa9.34□□□□□ -0.91
SENP6-208ENST00000483859 TLL1O43897 1013 aa9.34□□□□□ -0.91
SENP6-208ENST00000483859 GGCXP38435 758 aa9.34□□□□□ -0.91
SENP6-208ENST00000483859 ZPR1O75312 459 aa9.33□□□□□ -0.92
SENP6-208ENST00000483859 FAM187AA6NFU0 413 aa9.32□□□□□ -0.92
SENP6-208ENST00000483859 PDIA6Q15084 440 aa9.32□□□□□ -0.92
SENP6-208ENST00000483859 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
SENP6-208ENST00000483859 SPRYD7Q5W111 196 aa9.31□□□□□ -0.92
SENP6-208ENST00000483859 LIAT1Q6ZQX7 453 aa9.31□□□□□ -0.92
SENP6-208ENST00000483859 DGAT1O75907 488 aa9.3□□□□□ -0.92
SENP6-208ENST00000483859 DCAF8L2P0C7V8 631 aa9.3□□□□□ -0.92
SENP6-208ENST00000483859 HDGFP51858 240 aaKnown RBP9.3□□□□□ -0.92
SENP6-208ENST00000483859 BLOC1S3Q6QNY0 202 aa9.3□□□□□ -0.92
SENP6-208ENST00000483859 TREML4Q6UXN2 200 aa9.3□□□□□ -0.92
SENP6-208ENST00000483859 TMUB1Q9BVT8 246 aa9.3□□□□□ -0.92
SENP6-208ENST00000483859 DACH1Q9UI36 760 aa9.28□□□□□ -0.92
SENP6-208ENST00000483859 ZNF697Q5TEC3 545 aa9.27□□□□□ -0.93
SENP6-208ENST00000483859 ZNF598Q86UK7 904 aaKnown RBP9.27□□□□□ -0.93
SENP6-208ENST00000483859 PADI6Q6TGC4 694 aa9.26□□□□□ -0.93
SENP6-208ENST00000483859 AAASQ9NRG9 546 aa9.26□□□□□ -0.93
SENP6-208ENST00000483859 PCDHB3Q9Y5E6 796 aa9.26□□□□□ -0.93
SENP6-208ENST00000483859 GDF9O60383 454 aa9.25□□□□□ -0.93
SENP6-208ENST00000483859 S1PR4O95977 384 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms