RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 TEX14Q8IWB6 1497 aa20.16■□□□□ 0.82
CLK3-204ENST00000483723 DIEXFQ68CQ4 756 aaKnown RBP20.16■□□□□ 0.82
CLK3-204ENST00000483723 L3MBTL2Q969R5 705 aa20.16■□□□□ 0.82
CLK3-204ENST00000483723 FAM69CQ0P6D2 419 aa20.15■□□□□ 0.82
CLK3-204ENST00000483723 HECW2Q9P2P5 1572 aa20.13■□□□□ 0.81
CLK3-204ENST00000483723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.12■□□□□ 0.813e-9■■■■■ 27.4
CLK3-204ENST00000483723 VWDEQ8N2E2 1590 aa20.12■□□□□ 0.81
CLK3-204ENST00000483723 RICTORQ6R327 1708 aa20.12■□□□□ 0.81
CLK3-204ENST00000483723 PPRC1Q5VV67 1664 aaKnown RBP20.11■□□□□ 0.81
CLK3-204ENST00000483723 ATP10AO60312 1499 aa20.1■□□□□ 0.81
CLK3-204ENST00000483723 A2MP01023 1474 aa20.09■□□□□ 0.81
CLK3-204ENST00000483723 PLA2R1Q13018 1463 aa20.09■□□□□ 0.81
CLK3-204ENST00000483723 MYT1LQ9UL68 1186 aa20.08■□□□□ 0.81
CLK3-204ENST00000483723 BCORL1Q5H9F3 1711 aa20.07■□□□□ 0.8
CLK3-204ENST00000483723 MROH1Q8NDA8 1641 aa20.07■□□□□ 0.8
CLK3-204ENST00000483723 KIF13AQ9H1H9 1805 aa20.07■□□□□ 0.8
CLK3-204ENST00000483723 PRDM15P57071 1507 aaPredicted RBP20.07■□□□□ 0.8
CLK3-204ENST00000483723 KIF3BO15066 747 aa20.06■□□□□ 0.8
CLK3-204ENST00000483723 RAPGEF3O95398 923 aa20.06■□□□□ 0.8
CLK3-204ENST00000483723 FRMPD1Q5SYB0 1578 aa20.06■□□□□ 0.8
CLK3-204ENST00000483723 ABCA6Q8N139 1617 aa20.05■□□□□ 0.8
CLK3-204ENST00000483723 RNF17Q9BXT8 1623 aaKnown RBP20.05■□□□□ 0.8
CLK3-204ENST00000483723 TET3O43151 1660 aa20.04■□□□□ 0.8
CLK3-204ENST00000483723 E9PCH4 1651 aa20.04■□□□□ 0.8
CLK3-204ENST00000483723 KANK1Q14678 1352 aa20.03■□□□□ 0.8
CLK3-204ENST00000483723 TSPOAP1O95153 1857 aa20.02■□□□□ 0.8
CLK3-204ENST00000483723 NBPF8Q3BBV2 869 aa20.02■□□□□ 0.8
CLK3-204ENST00000483723 ZMYM4Q5VZL5 1548 aa20.02■□□□□ 0.79
CLK3-204ENST00000483723 DIP2CQ9Y2E4 1556 aa20.01■□□□□ 0.79
CLK3-204ENST00000483723 CCDC144AA2RUR9 1427 aa20■□□□□ 0.79
CLK3-204ENST00000483723 PTPRTO14522 1441 aa20■□□□□ 0.79
CLK3-204ENST00000483723 LMTK2Q8IWU2 1503 aa20■□□□□ 0.79
CLK3-204ENST00000483723 UHRF1BP1Q6BDS2 1440 aa19.99■□□□□ 0.79
CLK3-204ENST00000483723 TRPM2O94759 1503 aa19.95■□□□□ 0.78
CLK3-204ENST00000483723 SPHKAPQ2M3C7 1700 aa19.95■□□□□ 0.78
CLK3-204ENST00000483723 YEATS2Q9ULM3 1422 aa19.94■□□□□ 0.78
CLK3-204ENST00000483723 EFCAB6Q5THR3 1501 aa19.92■□□□□ 0.78
CLK3-204ENST00000483723 CEP152O94986 1710 aa19.91■□□□□ 0.78
CLK3-204ENST00000483723 REREQ9P2R6 1566 aa19.89■□□□□ 0.78
CLK3-204ENST00000483723 SPATA31E1Q6ZUB1 1445 aa19.89■□□□□ 0.78
CLK3-204ENST00000483723 EIF4G2P78344 907 aaKnown RBP eCLIP19.89■□□□□ 0.77
CLK3-204ENST00000483723 HSPA5P11021 654 aaKnown RBP19.88■□□□□ 0.77
CLK3-204ENST00000483723 NEURL4Q96JN8 1562 aa19.88■□□□□ 0.77
CLK3-204ENST00000483723 COL17A1Q9UMD9 1497 aaPredicted RBP19.88■□□□□ 0.77
CLK3-204ENST00000483723 HIRIP3Q9BW71 556 aaPredicted RBP19.88■□□□□ 0.77
CLK3-204ENST00000483723 RALGAPBQ86X10 1494 aa19.87■□□□□ 0.77
CLK3-204ENST00000483723 DCAF11Q8TEB1 546 aa19.87■□□□□ 0.77
CLK3-204ENST00000483723 ABCC3O15438 1527 aa19.87■□□□□ 0.77
CLK3-204ENST00000483723 CLTCL1P53675 1640 aa19.86■□□□□ 0.77
CLK3-204ENST00000483723 GGT6Q6P531 493 aa19.86■□□□□ 0.77
CLK3-204ENST00000483723 AGLP35573 1532 aa19.84■□□□□ 0.77
CLK3-204ENST00000483723 MIER1Q8N108 512 aa19.84■□□□□ 0.77
CLK3-204ENST00000483723 PRAG1Q86YV5 1406 aa19.83■□□□□ 0.77
CLK3-204ENST00000483723 KDM2AQ9Y2K7 1162 aa19.83■□□□□ 0.77
CLK3-204ENST00000483723 ZC3H13Q5T200 1668 aaKnown RBP19.83■□□□□ 0.76
CLK3-204ENST00000483723 RGL3Q3MIN7 710 aa19.82■□□□□ 0.76
CLK3-204ENST00000483723 NPATQ14207 1427 aa19.82■□□□□ 0.76
CLK3-204ENST00000483723 STAC3Q96MF2 364 aa19.82■□□□□ 0.76
CLK3-204ENST00000483723 WASHC2CQ9Y4E1 1318 aa19.82■□□□□ 0.76
CLK3-204ENST00000483723 CAMSAP1Q5T5Y3 1602 aa19.81■□□□□ 0.76
CLK3-204ENST00000483723 ARHGAP31Q2M1Z3 1444 aa19.81■□□□□ 0.76
CLK3-204ENST00000483723 TRPM1Q7Z4N2 1603 aa19.8■□□□□ 0.76
CLK3-204ENST00000483723 ZNF326Q5BKZ1 582 aaKnown RBP19.79■□□□□ 0.76
CLK3-204ENST00000483723 DDX10Q13206 875 aaKnown RBP19.78■□□□□ 0.76
CLK3-204ENST00000483723 PPP6R1Q9UPN7 881 aa19.78■□□□□ 0.76
CLK3-204ENST00000483723 CNTLNQ9NXG0 1405 aa19.77■□□□□ 0.76
CLK3-204ENST00000483723 NOS1P29475 1434 aa19.77■□□□□ 0.75
CLK3-204ENST00000483723 KIF1BO60333 1816 aa19.77■□□□□ 0.75
CLK3-204ENST00000483723 ARHGEF40Q8TER5 1519 aa19.76■□□□□ 0.75
CLK3-204ENST00000483723 GPRASP1Q5JY77 1395 aa19.76■□□□□ 0.75
CLK3-204ENST00000483723 USP47Q96K76 1375 aa19.75■□□□□ 0.75
CLK3-204ENST00000483723 UGGT1Q9NYU2 1555 aa19.75■□□□□ 0.75
CLK3-204ENST00000483723 SIGLEC1Q9BZZ2 1709 aa19.74■□□□□ 0.75
CLK3-204ENST00000483723 LAMC1P11047 1609 aa19.74■□□□□ 0.75
CLK3-204ENST00000483723 POLR1AO95602 1720 aaPredicted RBP19.74■□□□□ 0.75
CLK3-204ENST00000483723 WASHC2AQ641Q2 1341 aa19.74■□□□□ 0.75
CLK3-204ENST00000483723 CFAP65Q6ZU64 1925 aaKnown RBP19.73■□□□□ 0.75
CLK3-204ENST00000483723 CARD11Q9BXL7 1154 aa19.72■□□□□ 0.75
CLK3-204ENST00000483723 C11orf95C9JLR9 678 aaPredicted RBP19.71■□□□□ 0.75
CLK3-204ENST00000483723 MADDQ8WXG6 1647 aa19.71■□□□□ 0.75
CLK3-204ENST00000483723 PIK3C2BO00750 1634 aa19.71■□□□□ 0.75
CLK3-204ENST00000483723 ADGRB3O60242 1522 aa19.7■□□□□ 0.74
CLK3-204ENST00000483723 IFT172Q9UG01 1749 aa19.7■□□□□ 0.74
CLK3-204ENST00000483723 ROCK2O75116 1388 aaKnown RBP19.7■□□□□ 0.74
CLK3-204ENST00000483723 CCDC7Q96M83 1385 aa19.7■□□□□ 0.74
CLK3-204ENST00000483723 MROH2AA6NES4 1674 aa19.69■□□□□ 0.74
CLK3-204ENST00000483723 SYNMO15061 1565 aa19.69■□□□□ 0.74
CLK3-204ENST00000483723 MYOM2P54296 1465 aa19.68■□□□□ 0.74
CLK3-204ENST00000483723 NBPF1Q3BBV0 1214 aa19.68■□□□□ 0.74
CLK3-204ENST00000483723 KIAA1210Q9ULL0 1709 aa19.66■□□□□ 0.74
CLK3-204ENST00000483723 ARID4BQ4LE39 1312 aaPredicted RBP19.66■□□□□ 0.74
CLK3-204ENST00000483723 PREX1Q8TCU6 1659 aa19.65■□□□□ 0.74
CLK3-204ENST00000483723 NRXN1Q9ULB1 1477 aa19.64■□□□□ 0.73
CLK3-204ENST00000483723 KIF7Q2M1P5 1343 aa19.64■□□□□ 0.73
CLK3-204ENST00000483723 SLC52A1Q9NWF4 448 aa19.63■□□□□ 0.73
CLK3-204ENST00000483723 RPGRIP1LQ68CZ1 1315 aa19.63■□□□□ 0.73
CLK3-204ENST00000483723 ST20-MTHFSA0A0A6YYL1 179 aa19.62■□□□□ 0.73
CLK3-204ENST00000483723 CLTCQ00610 1675 aaKnown RBP19.61■□□□□ 0.73
CLK3-204ENST00000483723 PPLO60437 1756 aa19.61■□□□□ 0.73
CLK3-204ENST00000483723 IDI1Q13907 227 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms