RNA–Protein interactions for RNA: ENST00000483595.1

PDCD4-207, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-207ENST00000483595 TIAM1Q13009 1591 aa9.88□□□□□ -0.83
PDCD4-207ENST00000483595 SAMD9Q5K651 1589 aa9.88□□□□□ -0.83
PDCD4-207ENST00000483595 THOC2Q8NI27 1593 aaKnown RBP9.88□□□□□ -0.83
PDCD4-207ENST00000483595 NCKAP5LQ9HCH0 1330 aa9.88□□□□□ -0.83
PDCD4-207ENST00000483595 PBRM1Q86U86 1689 aa9.88□□□□□ -0.83
PDCD4-207ENST00000483595 KDM2AQ9Y2K7 1162 aa9.87□□□□□ -0.83
PDCD4-207ENST00000483595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDCD4-207ENST00000483595 LRRC9Q6ZRR7 1453 aa9.86□□□□□ -0.83
PDCD4-207ENST00000483595 KIAA0586Q9BVV6 1533 aa9.86□□□□□ -0.83
PDCD4-207ENST00000483595 G3V3G9 751 aa9.85□□□□□ -0.83
PDCD4-207ENST00000483595 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
PDCD4-207ENST00000483595 CCNB3Q8WWL7 1395 aa9.85□□□□□ -0.83
PDCD4-207ENST00000483595 IQGAP2Q13576 1575 aa9.84□□□□□ -0.83
PDCD4-207ENST00000483595 CFAP43Q8NDM7 1665 aa9.84□□□□□ -0.83
PDCD4-207ENST00000483595 UGGT2Q9NYU1 1516 aa9.84□□□□□ -0.83
PDCD4-207ENST00000483595 KANK4Q5T7N3 995 aaPredicted RBP9.84□□□□□ -0.83
PDCD4-207ENST00000483595 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
PDCD4-207ENST00000483595 CCDC18Q5T9S5 1454 aa9.83□□□□□ -0.84
PDCD4-207ENST00000483595 FHOD3Q2V2M9 1422 aa9.82□□□□□ -0.84
PDCD4-207ENST00000483595 KIF3CO14782 793 aa9.82□□□□□ -0.84
PDCD4-207ENST00000483595 SYNJ2O15056 1496 aa9.82□□□□□ -0.84
PDCD4-207ENST00000483595 ZNF608Q9ULD9 1512 aaPredicted RBP9.81□□□□□ -0.84
PDCD4-207ENST00000483595 TTBK1Q5TCY1 1321 aaPredicted RBP9.81□□□□□ -0.84
PDCD4-207ENST00000483595 ACIN1Q9UKV3 1341 aaKnown RBP9.81□□□□□ -0.84
PDCD4-207ENST00000483595 PCF11O94913 1555 aaKnown RBP9.8□□□□□ -0.84
PDCD4-207ENST00000483595 GRIN2AQ12879 1464 aa9.8□□□□□ -0.84
PDCD4-207ENST00000483595 SNAPC4Q5SXM2 1469 aa9.8□□□□□ -0.84
PDCD4-207ENST00000483595 C2orf72A6NCS6 295 aa9.8□□□□□ -0.84
PDCD4-207ENST00000483595 EIF4G3O43432 1585 aaKnown RBP9.8□□□□□ -0.84
PDCD4-207ENST00000483595 MAMSTRQ6ZN01 415 aa9.79□□□□□ -0.84
PDCD4-207ENST00000483595 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.79□□□□□ -0.84
PDCD4-207ENST00000483595 MFSD10Q14728 455 aa9.78□□□□□ -0.84
PDCD4-207ENST00000483595 VSIG10Q8N0Z9 540 aa9.78□□□□□ -0.84
PDCD4-207ENST00000483595 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
PDCD4-207ENST00000483595 SCUBE2Q9NQ36 999 aa9.78□□□□□ -0.84
PDCD4-207ENST00000483595 GPHNQ9NQX3 736 aaPredicted RBP9.78□□□□□ -0.84
PDCD4-207ENST00000483595 MTUS2Q5JR59 1369 aa9.77□□□□□ -0.84
PDCD4-207ENST00000483595 P3H3Q8IVL6 736 aa9.77□□□□□ -0.85
PDCD4-207ENST00000483595 LARP6Q9BRS8 491 aaKnown RBP9.77□□□□□ -0.85
PDCD4-207ENST00000483595 CARMIL2Q6F5E8 1435 aa9.76□□□□□ -0.85
PDCD4-207ENST00000483595 HECW1Q76N89 1606 aa9.76□□□□□ -0.85
PDCD4-207ENST00000483595 NUP160Q12769 1436 aa9.75□□□□□ -0.85
PDCD4-207ENST00000483595 PDE4AP27815 886 aa9.75□□□□□ -0.85
PDCD4-207ENST00000483595 DSG2Q14126 1118 aa9.75□□□□□ -0.85
PDCD4-207ENST00000483595 TMC2Q8TDI7 906 aa9.75□□□□□ -0.85
PDCD4-207ENST00000483595 CDK11AQ9UQ88 783 aaPredicted RBP9.75□□□□□ -0.85
PDCD4-207ENST00000483595 EHBP1L1Q8N3D4 1523 aa9.75□□□□□ -0.85
PDCD4-207ENST00000483595 ATP1B4Q9UN42 357 aaPredicted RBP9.74□□□□□ -0.85
PDCD4-207ENST00000483595 PPP1R15BQ5SWA1 713 aa9.73□□□□□ -0.85
PDCD4-207ENST00000483595 SLAIN1Q8ND83 568 aa9.73□□□□□ -0.85
PDCD4-207ENST00000483595 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
PDCD4-207ENST00000483595 FOXK1P85037 733 aa9.72□□□□□ -0.85
PDCD4-207ENST00000483595 PHLDB1Q86UU1 1377 aa9.72□□□□□ -0.85
PDCD4-207ENST00000483595 KIAA0556O60303 1618 aa9.71□□□□□ -0.85
PDCD4-207ENST00000483595 SUPT6HQ7KZ85 1726 aaKnown RBP9.71□□□□□ -0.85
PDCD4-207ENST00000483595 FGD6Q6ZV73 1430 aa9.71□□□□□ -0.86
PDCD4-207ENST00000483595 DISP1Q96F81 1524 aa9.71□□□□□ -0.86
PDCD4-207ENST00000483595 JPH4Q96JJ6 628 aa9.7□□□□□ -0.86
PDCD4-207ENST00000483595 MYOM3Q5VTT5 1437 aa9.7□□□□□ -0.86
PDCD4-207ENST00000483595 MIA2Q96PC5 1412 aa9.7□□□□□ -0.86
PDCD4-207ENST00000483595 SETD5Q9C0A6 1442 aa9.7□□□□□ -0.86
PDCD4-207ENST00000483595 EPRSP07814 1512 aaKnown RBP9.7□□□□□ -0.86
PDCD4-207ENST00000483595 ARHGEF11O15085 1522 aa9.69□□□□□ -0.86
PDCD4-207ENST00000483595 NCOA2Q15596 1464 aa9.69□□□□□ -0.86
PDCD4-207ENST00000483595 PLPP6Q8IY26 295 aa9.69□□□□□ -0.86
PDCD4-207ENST00000483595 TIMELESSQ9UNS1 1208 aa9.69□□□□□ -0.86
PDCD4-207ENST00000483595 DHX57Q6P158 1386 aaKnown RBP9.67□□□□□ -0.86
PDCD4-207ENST00000483595 KCNV2Q8TDN2 545 aa9.67□□□□□ -0.86
PDCD4-207ENST00000483595 CEP170Q5SW79 1584 aa9.67□□□□□ -0.86
PDCD4-207ENST00000483595 CAMK2BQ13554 666 aa9.66□□□□□ -0.86
PDCD4-207ENST00000483595 FAM50AQ14320 339 aaKnown RBP9.66□□□□□ -0.86
PDCD4-207ENST00000483595 TCOF1Q13428 1488 aaKnown RBP9.66□□□□□ -0.86
PDCD4-207ENST00000483595 AKNAQ7Z591 1439 aa9.65□□□□□ -0.86
PDCD4-207ENST00000483595 RAPGEF6Q8TEU7 1601 aa9.65□□□□□ -0.86
PDCD4-207ENST00000483595 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
PDCD4-207ENST00000483595 EMILIN3Q9NT22 766 aa9.65□□□□□ -0.86
PDCD4-207ENST00000483595 WDR70Q9NW82 654 aa9.65□□□□□ -0.86
PDCD4-207ENST00000483595 RAB3GAP2Q9H2M9 1393 aa9.63□□□□□ -0.87
PDCD4-207ENST00000483595 E2F4Q16254 413 aa9.63□□□□□ -0.87
PDCD4-207ENST00000483595 LCE2DQ5TA82 110 aaPredicted RBP9.63□□□□□ -0.87
PDCD4-207ENST00000483595 HFM1A2PYH4 1435 aa9.63□□□□□ -0.87
PDCD4-207ENST00000483595 NUP153P49790 1475 aaKnown RBP9.62□□□□□ -0.87
PDCD4-207ENST00000483595 TROQ12816 1431 aaPredicted RBP9.62□□□□□ -0.87
PDCD4-207ENST00000483595 ZNF316A6NFI3 1004 aaPredicted RBP9.61□□□□□ -0.87
PDCD4-207ENST00000483595 LRRIQ1Q96JM4 1722 aa9.61□□□□□ -0.87
PDCD4-207ENST00000483595 ROCK1Q13464 1354 aa9.6□□□□□ -0.87
PDCD4-207ENST00000483595 PTPN23Q9H3S7 1636 aa9.6□□□□□ -0.87
PDCD4-207ENST00000483595 PTPRGP23470 1445 aa9.59□□□□□ -0.87
PDCD4-207ENST00000483595 PLEKHD1A6NEE1 506 aa9.59□□□□□ -0.87
PDCD4-207ENST00000483595 ITGAEP38570 1179 aa9.59□□□□□ -0.87
PDCD4-207ENST00000483595 ABCA8O94911 1581 aa9.58□□□□□ -0.88
PDCD4-207ENST00000483595 MAGI3Q5TCQ9 1506 aa9.58□□□□□ -0.88
PDCD4-207ENST00000483595 OXER1Q8TDS5 423 aa9.58□□□□□ -0.88
PDCD4-207ENST00000483595 UPF1Q92900 1129 aaKnown RBP eCLIP9.58□□□□□ -0.88
PDCD4-207ENST00000483595 PRG4Q92954 1404 aaPredicted RBP9.57□□□□□ -0.88
PDCD4-207ENST00000483595 CDK13Q14004 1512 aaKnown RBP9.57□□□□□ -0.88
PDCD4-207ENST00000483595 SHROOM2Q13796 1616 aa9.57□□□□□ -0.88
PDCD4-207ENST00000483595 ADCY10Q96PN6 1610 aa9.57□□□□□ -0.88
PDCD4-207ENST00000483595 SLC34A2O95436 690 aa9.57□□□□□ -0.88
PDCD4-207ENST00000483595 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms