RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 PAXIP1Q6ZW49 1069 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-217ENST00000483442 DDX12PQ92771 950 aa8.4□□□□□ -1.06
LRCH3-217ENST00000483442 CFAP44Q96MT7 982 aa8.4□□□□□ -1.06
LRCH3-217ENST00000483442 THSD4Q6ZMP0 1018 aa8.39□□□□□ -1.07
LRCH3-217ENST00000483442 C6orf132Q5T0Z8 1188 aa8.38□□□□□ -1.07
LRCH3-217ENST00000483442 MRPL50Q8N5N7 158 aaKnown RBP8.38□□□□□ -1.07
LRCH3-217ENST00000483442 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
LRCH3-217ENST00000483442 WNT2BQ93097 391 aa8.37□□□□□ -1.07
LRCH3-217ENST00000483442 FBXW7Q969H0 707 aa8.37□□□□□ -1.07
LRCH3-217ENST00000483442 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.37□□□□□ -1.07
LRCH3-217ENST00000483442 PRIM1P49642 420 aaKnown RBP8.36□□□□□ -1.07
LRCH3-217ENST00000483442 EPAS1Q99814 870 aa8.35□□□□□ -1.07
LRCH3-217ENST00000483442 RABGEF1Q9UJ41 708 aa8.35□□□□□ -1.07
LRCH3-217ENST00000483442 PDIA6Q15084 440 aa8.34□□□□□ -1.07
LRCH3-217ENST00000483442 TSR1Q2NL82 804 aaKnown RBP8.34□□□□□ -1.07
LRCH3-217ENST00000483442 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
LRCH3-217ENST00000483442 GOLGA8CPA6NN73 597 aa8.33□□□□□ -1.08
LRCH3-217ENST00000483442 NBR1Q14596 966 aa8.32□□□□□ -1.08
LRCH3-217ENST00000483442 E2F4Q16254 413 aa8.32□□□□□ -1.08
LRCH3-217ENST00000483442 NBPF3Q9H094 633 aa8.32□□□□□ -1.08
LRCH3-217ENST00000483442 BCAMP50895 628 aa8.31□□□□□ -1.08
LRCH3-217ENST00000483442 SEPT9Q9UHD8 586 aaPredicted RBP8.31□□□□□ -1.08
LRCH3-217ENST00000483442 EN1Q05925 392 aaPredicted RBP8.3□□□□□ -1.08
LRCH3-217ENST00000483442 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
LRCH3-217ENST00000483442 TSKSQ9UJT2 592 aa8.29□□□□□ -1.08
LRCH3-217ENST00000483442 SPDYE16A6NNV3 312 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-217ENST00000483442 C3orf80F5H4A9 247 aa8.28□□□□□ -1.08
LRCH3-217ENST00000483442 ZFRQ96KR1 1074 aaKnown RBP8.28□□□□□ -1.08
LRCH3-217ENST00000483442 FAM198AQ9UFP1 575 aa8.28□□□□□ -1.08
LRCH3-217ENST00000483442 ARIH1Q9Y4X5 557 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-217ENST00000483442 MAP3K7O43318 606 aa8.27□□□□□ -1.09
LRCH3-217ENST00000483442 ONECUT3O60422 494 aaPredicted RBP8.27□□□□□ -1.09
LRCH3-217ENST00000483442 SOWAHBA6NEL2 793 aa8.26□□□□□ -1.09
LRCH3-217ENST00000483442 GRXCR2A6NFK2 248 aa8.26□□□□□ -1.09
LRCH3-217ENST00000483442 LAPTM4BQ86VI4 370 aa8.26□□□□□ -1.09
LRCH3-217ENST00000483442 ANKK1Q8NFD2 765 aa8.26□□□□□ -1.09
LRCH3-217ENST00000483442 TSHZ2Q9NRE2 1034 aa8.26□□□□□ -1.09
LRCH3-217ENST00000483442 OSBPP22059 807 aa8.25□□□□□ -1.09
LRCH3-217ENST00000483442 CDHR5Q9HBB8 845 aa8.25□□□□□ -1.09
LRCH3-217ENST00000483442 WDR70Q9NW82 654 aa8.25□□□□□ -1.09
LRCH3-217ENST00000483442 WBP1LQ9NX94 342 aa8.24□□□□□ -1.09
LRCH3-217ENST00000483442 SMAPO00193 183 aa8.23□□□□□ -1.09
LRCH3-217ENST00000483442 IFFO2Q5TF58 517 aa8.23□□□□□ -1.09
LRCH3-217ENST00000483442 FAM98CQ17RN3 349 aaKnown RBP8.22□□□□□ -1.09
LRCH3-217ENST00000483442 CDCA7LQ96GN5 454 aa8.22□□□□□ -1.09
LRCH3-217ENST00000483442 A0A0G2JS52 829 aa8.2□□□□□ -1.1
LRCH3-217ENST00000483442 PRSS12P56730 875 aa8.2□□□□□ -1.1
LRCH3-217ENST00000483442 ITGBL1O95965 494 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-217ENST00000483442 PACS2Q86VP3 889 aa8.18□□□□□ -1.1
LRCH3-217ENST00000483442 NPDC1Q9NQX5 325 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-217ENST00000483442 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-217ENST00000483442 HPS5Q9UPZ3 1129 aa8.18□□□□□ -1.1
LRCH3-217ENST00000483442 MLLT3P42568 568 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-217ENST00000483442 SAMD7Q7Z3H4 446 aa8.16□□□□□ -1.1
LRCH3-217ENST00000483442 KCNV2Q8TDN2 545 aa8.16□□□□□ -1.1
LRCH3-217ENST00000483442 TATDN2Q93075 761 aa8.15□□□□□ -1.1
LRCH3-217ENST00000483442 LRCH3Q96II8 777 aa8.15□□□□□ -1.1
LRCH3-217ENST00000483442 TSR3Q9UJK0 312 aaKnown RBP8.15□□□□□ -1.1
LRCH3-217ENST00000483442 NUDT18Q6ZVK8 323 aa8.14□□□□□ -1.11
LRCH3-217ENST00000483442 PNMA3Q9UL41 463 aa8.14□□□□□ -1.11
LRCH3-217ENST00000483442 PADI6Q6TGC4 694 aa8.12□□□□□ -1.11
LRCH3-217ENST00000483442 TTC13Q8NBP0 860 aa8.12□□□□□ -1.11
LRCH3-217ENST00000483442 CERKQ8TCT0 537 aa8.12□□□□□ -1.11
LRCH3-217ENST00000483442 NYAP1Q6ZVC0 841 aa8.11□□□□□ -1.11
LRCH3-217ENST00000483442 ARHGEF1Q92888 912 aaKnown RBP8.1□□□□□ -1.11
LRCH3-217ENST00000483442 NBPF26B4DH59 902 aa8.09□□□□□ -1.11
LRCH3-217ENST00000483442 RGS20O76081 388 aa8.09□□□□□ -1.11
LRCH3-217ENST00000483442 PPP4CP60510 307 aa8.09□□□□□ -1.11
LRCH3-217ENST00000483442 KCNC4Q03721 635 aa8.09□□□□□ -1.11
LRCH3-217ENST00000483442 TJAP1Q5JTD0 557 aa8.08□□□□□ -1.12
LRCH3-217ENST00000483442 RBM27Q9P2N5 1060 aaKnown RBP8.08□□□□□ -1.12
LRCH3-217ENST00000483442 APLP1P51693 650 aa8.06□□□□□ -1.12
LRCH3-217ENST00000483442 EYA1Q99502 592 aa8.06□□□□□ -1.12
LRCH3-217ENST00000483442 SWT1Q5T5J6 900 aaKnown RBP8.05□□□□□ -1.12
LRCH3-217ENST00000483442 ZNF516Q92618 1163 aa8.05□□□□□ -1.12
LRCH3-217ENST00000483442 RNF40O75150 1001 aa8.04□□□□□ -1.12
LRCH3-217ENST00000483442 MTRQ99707 1265 aa8.04□□□□□ -1.12
LRCH3-217ENST00000483442 SEMA3EO15041 775 aa8.03□□□□□ -1.12
LRCH3-217ENST00000483442 PTGDRQ13258 359 aa8.03□□□□□ -1.12
LRCH3-217ENST00000483442 FAM161AQ3B820 660 aa8.03□□□□□ -1.12
LRCH3-217ENST00000483442 IRX2Q9BZI1 471 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-217ENST00000483442 NKX2-3Q8TAU0 364 aa8.01□□□□□ -1.13
LRCH3-217ENST00000483442 IL21Q9HBE4 155 aa7.99□□□□□ -1.13
LRCH3-217ENST00000483442 CCDC180Q9P1Z9 1646 aa7.99□□□□□ -1.13
LRCH3-217ENST00000483442 NUTM2FA1L443 756 aa7.98□□□□□ -1.13
LRCH3-217ENST00000483442 HDGFP51858 240 aaKnown RBP7.97□□□□□ -1.13
LRCH3-217ENST00000483442 COPS2P61201 443 aa7.97□□□□□ -1.13
LRCH3-217ENST00000483442 PPP1R18Q6NYC8 613 aa7.97□□□□□ -1.13
LRCH3-217ENST00000483442 ADGRG1Q9Y653 693 aa7.97□□□□□ -1.13
LRCH3-217ENST00000483442 PLCB2Q00722 1185 aa7.96□□□□□ -1.14
LRCH3-217ENST00000483442 SLF2Q8IX21 1173 aa7.95□□□□□ -1.14
LRCH3-217ENST00000483442 RBM26Q5T8P6 1007 aaKnown RBP7.94□□□□□ -1.14
LRCH3-217ENST00000483442 RCCD1A6NED2 376 aa7.93□□□□□ -1.14
LRCH3-217ENST00000483442 LCE2BO14633 110 aa7.93□□□□□ -1.14
LRCH3-217ENST00000483442 FECHP22830 423 aa7.93□□□□□ -1.14
LRCH3-217ENST00000483442 P3H3Q8IVL6 736 aa7.93□□□□□ -1.14
LRCH3-217ENST00000483442 TMEM134Q9H6X4 195 aa7.93□□□□□ -1.14
LRCH3-217ENST00000483442 TESPA1A2RU30 521 aaPredicted RBP7.92□□□□□ -1.14
LRCH3-217ENST00000483442 DNAJB2P25686 324 aa7.92□□□□□ -1.14
LRCH3-217ENST00000483442 PRKD2Q9BZL6 878 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms