RNA–Protein interactions for RNA: ENST00000482961.1

GTDC1-216, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best)

Gene GTDC1, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-216ENST00000482961 MAP3K9P80192 1104 aa8.53□□□□□ -1.04
GTDC1-216ENST00000482961 NRG2O14511 850 aaPredicted RBP8.52□□□□□ -1.05
GTDC1-216ENST00000482961 PRKD2Q9BZL6 878 aa8.52□□□□□ -1.05
GTDC1-216ENST00000482961 SEPT9Q9UHD8 586 aaPredicted RBP8.52□□□□□ -1.05
GTDC1-216ENST00000482961 PCDHGA10Q9Y5H3 936 aa8.52□□□□□ -1.05
GTDC1-216ENST00000482961 PDE4AP27815 886 aa8.5□□□□□ -1.05
GTDC1-216ENST00000482961 TSR3Q9UJK0 312 aaKnown RBP8.5□□□□□ -1.05
GTDC1-216ENST00000482961 HPS5Q9UPZ3 1129 aa8.5□□□□□ -1.05
GTDC1-216ENST00000482961 HS6ST3Q8IZP7 471 aa8.49□□□□□ -1.05
GTDC1-216ENST00000482961 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.49□□□□□ -1.05
GTDC1-216ENST00000482961 ZNF775Q96BV0 537 aaPredicted RBP8.48□□□□□ -1.05
GTDC1-216ENST00000482961 LRCH3Q96II8 777 aa8.48□□□□□ -1.05
GTDC1-216ENST00000482961 NCKAP5LQ9HCH0 1330 aa8.48□□□□□ -1.05
GTDC1-216ENST00000482961 TYW1BQ6NUM6 668 aa8.46□□□□□ -1.06
GTDC1-216ENST00000482961 FBXW7Q969H0 707 aa8.46□□□□□ -1.06
GTDC1-216ENST00000482961 ONECUT3O60422 494 aaPredicted RBP8.45□□□□□ -1.06
GTDC1-216ENST00000482961 FAM98CQ17RN3 349 aaKnown RBP8.45□□□□□ -1.06
GTDC1-216ENST00000482961 CHGAP10645 457 aaKnown RBP8.44□□□□□ -1.06
GTDC1-216ENST00000482961 LARP6Q9BRS8 491 aaKnown RBP8.44□□□□□ -1.06
GTDC1-216ENST00000482961 PHF14O94880 888 aa8.43□□□□□ -1.06
GTDC1-216ENST00000482961 DDX27Q96GQ7 796 aaKnown RBP8.43□□□□□ -1.06
GTDC1-216ENST00000482961 TRIM6-TRIM34B2RNG4 842 aa8.42□□□□□ -1.06
GTDC1-216ENST00000482961 PPP4CP60510 307 aa8.42□□□□□ -1.06
GTDC1-216ENST00000482961 PPP1R18Q6NYC8 613 aa8.42□□□□□ -1.06
GTDC1-216ENST00000482961 RYDENQ9NUL5 291 aaKnown RBP8.42□□□□□ -1.06
GTDC1-216ENST00000482961 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
GTDC1-216ENST00000482961 V9GY48 417 aaPredicted RBP8.42□□□□□ -1.06
GTDC1-216ENST00000482961 C6orf132Q5T0Z8 1188 aa8.41□□□□□ -1.06
GTDC1-216ENST00000482961 NKX1-1Q15270 411 aaPredicted RBP8.4□□□□□ -1.06
GTDC1-216ENST00000482961 TJAP1Q5JTD0 557 aa8.4□□□□□ -1.06
GTDC1-216ENST00000482961 EMILIN3Q9NT22 766 aa8.4□□□□□ -1.06
GTDC1-216ENST00000482961 RBM33Q96EV2 1170 aaKnown RBP8.36□□□□□ -1.07
GTDC1-216ENST00000482961 MTRQ99707 1265 aa8.36□□□□□ -1.07
GTDC1-216ENST00000482961 IL21Q9HBE4 155 aa8.36□□□□□ -1.07
GTDC1-216ENST00000482961 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.36□□□□□ -1.07
GTDC1-216ENST00000482961 EPAS1Q99814 870 aa8.35□□□□□ -1.07
GTDC1-216ENST00000482961 PACS2Q86VP3 889 aa8.34□□□□□ -1.07
GTDC1-216ENST00000482961 ZNF516Q92618 1163 aa8.33□□□□□ -1.08
GTDC1-216ENST00000482961 MFSD10Q14728 455 aa8.32□□□□□ -1.08
GTDC1-216ENST00000482961 SAMD7Q7Z3H4 446 aa8.32□□□□□ -1.08
GTDC1-216ENST00000482961 DNAJC5Q9H3Z4 198 aa8.31□□□□□ -1.08
GTDC1-216ENST00000482961 TSKSQ9UJT2 592 aa8.31□□□□□ -1.08
GTDC1-216ENST00000482961 SMAPO00193 183 aa8.29□□□□□ -1.08
GTDC1-216ENST00000482961 NKX2-3Q8TAU0 364 aa8.29□□□□□ -1.08
GTDC1-216ENST00000482961 RNF40O75150 1001 aa8.27□□□□□ -1.09
GTDC1-216ENST00000482961 GGCXP38435 758 aa8.27□□□□□ -1.09
GTDC1-216ENST00000482961 PKDCCQ504Y2 493 aa8.27□□□□□ -1.09
GTDC1-216ENST00000482961 DDX12PQ92771 950 aa8.27□□□□□ -1.09
GTDC1-216ENST00000482961 POTECB2RU33 542 aa8.26□□□□□ -1.09
GTDC1-216ENST00000482961 TSR1Q2NL82 804 aaKnown RBP8.25□□□□□ -1.09
GTDC1-216ENST00000482961 DPYSL4O14531 572 aa8.24□□□□□ -1.09
GTDC1-216ENST00000482961 MAP3K7O43318 606 aa8.24□□□□□ -1.09
GTDC1-216ENST00000482961 MYT1Q01538 1121 aa8.24□□□□□ -1.09
GTDC1-216ENST00000482961 APLP1P51693 650 aa8.23□□□□□ -1.09
GTDC1-216ENST00000482961 GTPBP6O43824 516 aaPredicted RBP8.22□□□□□ -1.09
GTDC1-216ENST00000482961 HDGFP51858 240 aaKnown RBP8.22□□□□□ -1.09
GTDC1-216ENST00000482961 COPS2P61201 443 aa8.22□□□□□ -1.09
GTDC1-216ENST00000482961 NBR1Q14596 966 aa8.22□□□□□ -1.09
GTDC1-216ENST00000482961 TRIM67Q6ZTA4 783 aa8.22□□□□□ -1.09
GTDC1-216ENST00000482961 CDCA7LQ96GN5 454 aa8.22□□□□□ -1.09
GTDC1-216ENST00000482961 EN1Q05925 392 aaPredicted RBP8.21□□□□□ -1.1
GTDC1-216ENST00000482961 DGAT1O75907 488 aa8.2□□□□□ -1.1
GTDC1-216ENST00000482961 TREML4Q6UXN2 200 aa8.2□□□□□ -1.1
GTDC1-216ENST00000482961 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
GTDC1-216ENST00000482961 PNMA3Q9UL41 463 aa8.2□□□□□ -1.1
GTDC1-216ENST00000482961 SLC19A1P41440 591 aa8.19□□□□□ -1.1
GTDC1-216ENST00000482961 TATDN2Q93075 761 aa8.19□□□□□ -1.1
GTDC1-216ENST00000482961 PRSS12P56730 875 aa8.18□□□□□ -1.1
GTDC1-216ENST00000482961 FAM198AQ9UFP1 575 aa8.18□□□□□ -1.1
GTDC1-216ENST00000482961 NBPF26B4DH59 902 aa8.17□□□□□ -1.1
GTDC1-216ENST00000482961 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
GTDC1-216ENST00000482961 CAMK2BQ13554 666 aa8.16□□□□□ -1.1
GTDC1-216ENST00000482961 CADPS2Q86UW7 1296 aa8.16□□□□□ -1.1
GTDC1-216ENST00000482961 FAM187AA6NFU0 413 aa8.15□□□□□ -1.1
GTDC1-216ENST00000482961 RNF223E7ERA6 249 aa8.14□□□□□ -1.11
GTDC1-216ENST00000482961 ZPR1O75312 459 aa8.14□□□□□ -1.11
GTDC1-216ENST00000482961 LCE2AQ5TA79 106 aaPredicted RBP8.14□□□□□ -1.11
GTDC1-216ENST00000482961 SPRYD7Q5W111 196 aa8.14□□□□□ -1.11
GTDC1-216ENST00000482961 NUDT18Q6ZVK8 323 aa8.14□□□□□ -1.11
GTDC1-216ENST00000482961 PRR20EP86478 221 aa8.13□□□□□ -1.11
GTDC1-216ENST00000482961 PRR20CP86479 221 aa8.13□□□□□ -1.11
GTDC1-216ENST00000482961 PRR20DP86480 221 aa8.13□□□□□ -1.11
GTDC1-216ENST00000482961 PRR20BP86481 221 aa8.13□□□□□ -1.11
GTDC1-216ENST00000482961 PRR20AP86496 221 aa8.13□□□□□ -1.11
GTDC1-216ENST00000482961 ZNF598Q86UK7 904 aaKnown RBP8.13□□□□□ -1.11
GTDC1-216ENST00000482961 NECTIN2Q92692 538 aa8.13□□□□□ -1.11
GTDC1-216ENST00000482961 EMID1Q96A84 441 aaPredicted RBP8.13□□□□□ -1.11
GTDC1-216ENST00000482961 CERKQ8TCT0 537 aa8.12□□□□□ -1.11
GTDC1-216ENST00000482961 TNFRSF10AO00220 468 aa8.11□□□□□ -1.11
GTDC1-216ENST00000482961 ST8SIA5O15466 376 aa8.11□□□□□ -1.11
GTDC1-216ENST00000482961 ZNF697Q5TEC3 545 aa8.1□□□□□ -1.11
GTDC1-216ENST00000482961 SWT1Q5T5J6 900 aaKnown RBP8.09□□□□□ -1.11
GTDC1-216ENST00000482961 SLF2Q8IX21 1173 aa8.09□□□□□ -1.11
GTDC1-216ENST00000482961 AAASQ9NRG9 546 aa8.09□□□□□ -1.11
GTDC1-216ENST00000482961 PPEF1O14829 653 aaPredicted RBP8.08□□□□□ -1.12
GTDC1-216ENST00000482961 WFS1O76024 890 aa8.07□□□□□ -1.12
GTDC1-216ENST00000482961 STK17AQ9UEE5 414 aa8.07□□□□□ -1.12
GTDC1-216ENST00000482961 PCDHB3Q9Y5E6 796 aa8.07□□□□□ -1.12
GTDC1-216ENST00000482961 GDF9O60383 454 aa8.06□□□□□ -1.12
GTDC1-216ENST00000482961 SLC4A3P48751 1232 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms