RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 ADCY10Q96PN6 1610 aa16.6■□□□□ 0.25
CCDC78-213ENST00000482878 CEP170Q5SW79 1584 aa16.59■□□□□ 0.25
CCDC78-213ENST00000482878 C9orf84Q5VXU9 1444 aa16.58■□□□□ 0.25
CCDC78-213ENST00000482878 JPH4Q96JJ6 628 aa16.58■□□□□ 0.24
CCDC78-213ENST00000482878 KIF15Q9NS87 1388 aa16.58■□□□□ 0.24
CCDC78-213ENST00000482878 PLEKHD1A6NEE1 506 aa16.57■□□□□ 0.24
CCDC78-213ENST00000482878 DCAF11Q8TEB1 546 aa16.56■□□□□ 0.24
CCDC78-213ENST00000482878 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
CCDC78-213ENST00000482878 LRPPRCP42704 1394 aaKnown RBP16.55■□□□□ 0.24
CCDC78-213ENST00000482878 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
CCDC78-213ENST00000482878 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
CCDC78-213ENST00000482878 TSPY4P0CV99 314 aa16.54■□□□□ 0.24
CCDC78-213ENST00000482878 TSPY10P0CW01 314 aa16.54■□□□□ 0.24
CCDC78-213ENST00000482878 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
CCDC78-213ENST00000482878 ABCC10Q5T3U5 1492 aa16.54■□□□□ 0.24
CCDC78-213ENST00000482878 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
CCDC78-213ENST00000482878 BRPF3Q9ULD4 1205 aa16.54■□□□□ 0.24
CCDC78-213ENST00000482878 MYBBP1AQ9BQG0 1328 aaKnown RBP16.53■□□□□ 0.24
CCDC78-213ENST00000482878 HNRNPMP52272 730 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC78-213ENST00000482878 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
CCDC78-213ENST00000482878 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
CCDC78-213ENST00000482878 BRD4O60885 1362 aaPredicted RBP16.52■□□□□ 0.24
CCDC78-213ENST00000482878 ATP10BO94823 1461 aa16.52■□□□□ 0.24
CCDC78-213ENST00000482878 CDC42BPAQ5VT25 1732 aa16.52■□□□□ 0.23
CCDC78-213ENST00000482878 RALBP1Q15311 655 aa16.51■□□□□ 0.23
CCDC78-213ENST00000482878 KDM5DQ9BY66 1539 aa16.51■□□□□ 0.23
CCDC78-213ENST00000482878 PTPRGP23470 1445 aa16.5■□□□□ 0.23
CCDC78-213ENST00000482878 NUP160Q12769 1436 aa16.49■□□□□ 0.23
CCDC78-213ENST00000482878 PKNOX2Q96KN3 472 aa16.49■□□□□ 0.23
CCDC78-213ENST00000482878 KTN1Q86UP2 1357 aaKnown RBP16.48■□□□□ 0.23
CCDC78-213ENST00000482878 ABCA8O94911 1581 aa16.48■□□□□ 0.23
CCDC78-213ENST00000482878 RRP1P56182 461 aaKnown RBP16.47■□□□□ 0.23
CCDC78-213ENST00000482878 EXOC6Q8TAG9 804 aa16.45■□□□□ 0.22
CCDC78-213ENST00000482878 NBPF1Q3BBV0 1214 aa16.45■□□□□ 0.22
CCDC78-213ENST00000482878 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
CCDC78-213ENST00000482878 RCAN3Q9UKA8 241 aa16.44■□□□□ 0.22
CCDC78-213ENST00000482878 PARD3Q8TEW0 1356 aa16.43■□□□□ 0.22
CCDC78-213ENST00000482878 PRAG1Q86YV5 1406 aa16.43■□□□□ 0.22
CCDC78-213ENST00000482878 PER1O15534 1290 aaPredicted RBP16.43■□□□□ 0.22
CCDC78-213ENST00000482878 E9PCH4 1651 aa16.43■□□□□ 0.22
CCDC78-213ENST00000482878 FAM135AQ9P2D6 1515 aa16.43■□□□□ 0.22
CCDC78-213ENST00000482878 ARHGEF5Q12774 1597 aa16.41■□□□□ 0.22
CCDC78-213ENST00000482878 CCDC144AA2RUR9 1427 aa16.41■□□□□ 0.22
CCDC78-213ENST00000482878 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
CCDC78-213ENST00000482878 PPM1GO15355 546 aaPredicted RBP16.4■□□□□ 0.22
CCDC78-213ENST00000482878 CDCA7LQ96GN5 454 aa16.4■□□□□ 0.22
CCDC78-213ENST00000482878 CCDC141Q6ZP82 1450 aa16.39■□□□□ 0.21
CCDC78-213ENST00000482878 PLA2R1Q13018 1463 aa16.38■□□□□ 0.21
CCDC78-213ENST00000482878 CC2D1BQ5T0F9 858 aaKnown RBP16.38■□□□□ 0.21
CCDC78-213ENST00000482878 PDE3BQ13370 1112 aa16.38■□□□□ 0.21
CCDC78-213ENST00000482878 SAMD9LQ8IVG5 1584 aa16.37■□□□□ 0.21
CCDC78-213ENST00000482878 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
CCDC78-213ENST00000482878 TESK2Q96S53 571 aa16.37■□□□□ 0.21
CCDC78-213ENST00000482878 DISP3Q9P2K9 1392 aa16.36■□□□□ 0.21
CCDC78-213ENST00000482878 GPRASP1Q5JY77 1395 aa16.36■□□□□ 0.21
CCDC78-213ENST00000482878 GSE1Q14687 1217 aa16.36■□□□□ 0.21
CCDC78-213ENST00000482878 A2MP01023 1474 aa16.36■□□□□ 0.21
CCDC78-213ENST00000482878 RSPH4AQ5TD94 716 aa16.35■□□□□ 0.21
CCDC78-213ENST00000482878 PANK3Q9H999 370 aa16.34■□□□□ 0.21
CCDC78-213ENST00000482878 COL17A1Q9UMD9 1497 aaPredicted RBP16.34■□□□□ 0.21
CCDC78-213ENST00000482878 GLIPR1L2Q4G1C9 344 aa16.34■□□□□ 0.21
CCDC78-213ENST00000482878 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
CCDC78-213ENST00000482878 TCERG1O14776 1098 aaKnown RBP16.33■□□□□ 0.21
CCDC78-213ENST00000482878 WASHC2CQ9Y4E1 1318 aa16.33■□□□□ 0.21
CCDC78-213ENST00000482878 PLIN1O60240 522 aa16.33■□□□□ 0.2
CCDC78-213ENST00000482878 PDE4AP27815 886 aa16.32■□□□□ 0.2
CCDC78-213ENST00000482878 RSPH6AQ9H0K4 717 aa16.31■□□□□ 0.2
CCDC78-213ENST00000482878 CDC42BPBQ9Y5S2 1711 aa16.31■□□□□ 0.2
CCDC78-213ENST00000482878 SYCP2Q9BX26 1530 aa16.31■□□□□ 0.2
CCDC78-213ENST00000482878 PREX2Q70Z35 1606 aa16.3■□□□□ 0.2
CCDC78-213ENST00000482878 ERBINQ96RT1 1412 aa16.3■□□□□ 0.2
CCDC78-213ENST00000482878 PRDM15P57071 1507 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-213ENST00000482878 BLMP54132 1417 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-213ENST00000482878 PLEKHH2Q8IVE3 1493 aa16.29■□□□□ 0.2
CCDC78-213ENST00000482878 BACH2Q9BYV9 841 aa16.29■□□□□ 0.2
CCDC78-213ENST00000482878 CHGAP10645 457 aaKnown RBP16.28■□□□□ 0.2
CCDC78-213ENST00000482878 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
CCDC78-213ENST00000482878 VSIG10Q8N0Z9 540 aa16.28■□□□□ 0.2
CCDC78-213ENST00000482878 TMF1P82094 1093 aa16.28■□□□□ 0.2
CCDC78-213ENST00000482878 UNC13BO14795 1591 aa16.27■□□□□ 0.2
CCDC78-213ENST00000482878 SKAP1Q86WV1 359 aa16.27■□□□□ 0.19
CCDC78-213ENST00000482878 CRBNQ96SW2 442 aa16.27■□□□□ 0.19
CCDC78-213ENST00000482878 ARHGAP5Q13017 1502 aa16.26■□□□□ 0.19
CCDC78-213ENST00000482878 INSRP06213 1382 aa16.26■□□□□ 0.19
CCDC78-213ENST00000482878 MS4A1P11836 297 aa16.26■□□□□ 0.19
CCDC78-213ENST00000482878 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
CCDC78-213ENST00000482878 LAMC1P11047 1609 aa16.25■□□□□ 0.19
CCDC78-213ENST00000482878 TTC37Q6PGP7 1564 aa16.24■□□□□ 0.19
CCDC78-213ENST00000482878 MAST1Q9Y2H9 1570 aa16.24■□□□□ 0.19
CCDC78-213ENST00000482878 SLC4A3P48751 1232 aa16.24■□□□□ 0.19
CCDC78-213ENST00000482878 NFKBIBQ15653 356 aa16.23■□□□□ 0.19
CCDC78-213ENST00000482878 C20orf194Q5TEA3 1177 aa16.23■□□□□ 0.19
CCDC78-213ENST00000482878 ZMYM4Q5VZL5 1548 aa16.23■□□□□ 0.19
CCDC78-213ENST00000482878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCDC78-213ENST00000482878 IQGAP3Q86VI3 1631 aa16.22■□□□□ 0.19
CCDC78-213ENST00000482878 ATP10AO60312 1499 aa16.21■□□□□ 0.19
CCDC78-213ENST00000482878 MAGI2Q86UL8 1455 aa16.21■□□□□ 0.18
CCDC78-213ENST00000482878 EIF2AK4Q9P2K8 1649 aaKnown RBP16.2■□□□□ 0.18
CCDC78-213ENST00000482878 DDRGK1Q96HY6 314 aa16.19■□□□□ 0.18
CCDC78-213ENST00000482878 PPP2R1AP30153 589 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms