RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 ARHGAP5Q13017 1502 aa20.57■□□□□ 0.88
DDR1-244ENST00000482873 SYCP2Q9BX26 1530 aa20.56■□□□□ 0.88
DDR1-244ENST00000482873 TMC1Q8TDI8 760 aa20.56■□□□□ 0.88
DDR1-244ENST00000482873 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
DDR1-244ENST00000482873 SHANK2Q9UPX8 1470 aa20.54■□□□□ 0.88
DDR1-244ENST00000482873 CDC42BPBQ9Y5S2 1711 aa20.53■□□□□ 0.88
DDR1-244ENST00000482873 KDM5CP41229 1560 aa20.52■□□□□ 0.88
DDR1-244ENST00000482873 TTC37Q6PGP7 1564 aa20.52■□□□□ 0.88
DDR1-244ENST00000482873 PLEKHH2Q8IVE3 1493 aa20.51■□□□□ 0.87
DDR1-244ENST00000482873 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
DDR1-244ENST00000482873 FAM135AQ9P2D6 1515 aa20.51■□□□□ 0.87
DDR1-244ENST00000482873 SMG6Q86US8 1419 aaKnown RBP20.5■□□□□ 0.87
DDR1-244ENST00000482873 AFAP1Q8N556 730 aa20.49■□□□□ 0.87
DDR1-244ENST00000482873 RALGAPBQ86X10 1494 aa20.49■□□□□ 0.87
DDR1-244ENST00000482873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.48■□□□□ 0.876e-7■■■■□ 21.9
DDR1-244ENST00000482873 UHRF1BP1Q6BDS2 1440 aa20.47■□□□□ 0.87
DDR1-244ENST00000482873 PNISRQ8TF01 805 aaKnown RBP20.47■□□□□ 0.87
DDR1-244ENST00000482873 CCDC136Q96JN2 1154 aa20.47■□□□□ 0.87
DDR1-244ENST00000482873 NUDCQ9Y266 331 aa20.47■□□□□ 0.87
DDR1-244ENST00000482873 CC2D1BQ5T0F9 858 aaKnown RBP20.46■□□□□ 0.87
DDR1-244ENST00000482873 RSPH4AQ5TD94 716 aa20.46■□□□□ 0.87
DDR1-244ENST00000482873 RNF123Q5XPI4 1314 aa20.46■□□□□ 0.87
DDR1-244ENST00000482873 ANO8Q9HCE9 1232 aaPredicted RBP20.46■□□□□ 0.87
DDR1-244ENST00000482873 ARHGEF12Q9NZN5 1544 aa20.45■□□□□ 0.86
DDR1-244ENST00000482873 PLA2R1Q13018 1463 aa20.44■□□□□ 0.86
DDR1-244ENST00000482873 ARHGEF5Q12774 1597 aa20.44■□□□□ 0.86
DDR1-244ENST00000482873 PREX2Q70Z35 1606 aa20.44■□□□□ 0.86
DDR1-244ENST00000482873 IPO9Q96P70 1041 aaKnown RBP20.43■□□□□ 0.86
DDR1-244ENST00000482873 POLR1AO95602 1720 aaPredicted RBP20.43■□□□□ 0.86
DDR1-244ENST00000482873 ANP32AP39687 249 aaKnown RBP20.42■□□□□ 0.86
DDR1-244ENST00000482873 EFCAB2Q5VUJ9 269 aa20.41■□□□□ 0.86
DDR1-244ENST00000482873 KDM5DQ9BY66 1539 aa20.4■□□□□ 0.86
DDR1-244ENST00000482873 PRAG1Q86YV5 1406 aa20.39■□□□□ 0.86
DDR1-244ENST00000482873 TRAPPC8Q9Y2L5 1435 aa20.39■□□□□ 0.85
DDR1-244ENST00000482873 ARID4BQ4LE39 1312 aaPredicted RBP20.38■□□□□ 0.85
DDR1-244ENST00000482873 ABCC2Q92887 1545 aa20.37■□□□□ 0.85
DDR1-244ENST00000482873 ZBTB47Q9UFB7 747 aaPredicted RBP20.37■□□□□ 0.85
DDR1-244ENST00000482873 DISP3Q9P2K9 1392 aa20.37■□□□□ 0.85
DDR1-244ENST00000482873 A2MP01023 1474 aa20.37■□□□□ 0.85
DDR1-244ENST00000482873 MYBBP1AQ9BQG0 1328 aaKnown RBP20.35■□□□□ 0.85
DDR1-244ENST00000482873 PANK3Q9H999 370 aa20.35■□□□□ 0.85
DDR1-244ENST00000482873 SPAG9O60271 1321 aaKnown RBP20.34■□□□□ 0.85
DDR1-244ENST00000482873 UBE2Q2Q8WVN8 375 aa20.33■□□□□ 0.85
DDR1-244ENST00000482873 TESK2Q96S53 571 aa20.33■□□□□ 0.85
DDR1-244ENST00000482873 PLCH2O75038 1416 aa20.32■□□□□ 0.84
DDR1-244ENST00000482873 RTL5Q5HYW3 569 aaPredicted RBP20.31■□□□□ 0.84
DDR1-244ENST00000482873 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
DDR1-244ENST00000482873 PER1O15534 1290 aaPredicted RBP20.3■□□□□ 0.84
DDR1-244ENST00000482873 RALBP1Q15311 655 aa20.3■□□□□ 0.84
DDR1-244ENST00000482873 CDCA7LQ96GN5 454 aa20.29■□□□□ 0.84
DDR1-244ENST00000482873 MYO5CQ9NQX4 1742 aa20.29■□□□□ 0.84
DDR1-244ENST00000482873 KTN1Q86UP2 1357 aaKnown RBP20.28■□□□□ 0.84
DDR1-244ENST00000482873 KIF3BO15066 747 aa20.28■□□□□ 0.84
DDR1-244ENST00000482873 NLRP13Q86W25 1043 aa20.26■□□□□ 0.83
DDR1-244ENST00000482873 CLASP1Q7Z460 1538 aa20.26■□□□□ 0.83
DDR1-244ENST00000482873 ZCCHC11Q5TAX3 1644 aaKnown RBP20.26■□□□□ 0.83
DDR1-244ENST00000482873 TMF1P82094 1093 aa20.25■□□□□ 0.83
DDR1-244ENST00000482873 TRPM1Q7Z4N2 1603 aa20.25■□□□□ 0.83
DDR1-244ENST00000482873 BRD4O60885 1362 aaPredicted RBP20.25■□□□□ 0.83
DDR1-244ENST00000482873 DUOX2Q9NRD8 1548 aa20.24■□□□□ 0.83
DDR1-244ENST00000482873 SENP3Q9H4L4 574 aaPredicted RBP20.24■□□□□ 0.83
DDR1-244ENST00000482873 NPM2Q86SE8 214 aaKnown RBP20.23■□□□□ 0.83
DDR1-244ENST00000482873 UNC13BO14795 1591 aa20.23■□□□□ 0.83
DDR1-244ENST00000482873 ERBINQ96RT1 1412 aa20.22■□□□□ 0.83
DDR1-244ENST00000482873 LRPPRCP42704 1394 aaKnown RBP20.22■□□□□ 0.83
DDR1-244ENST00000482873 EXOC6Q8TAG9 804 aa20.21■□□□□ 0.83
DDR1-244ENST00000482873 SCAPERQ9BY12 1400 aa20.21■□□□□ 0.83
DDR1-244ENST00000482873 MAST1Q9Y2H9 1570 aa20.2■□□□□ 0.82
DDR1-244ENST00000482873 RRP1P56182 461 aaKnown RBP20.2■□□□□ 0.82
DDR1-244ENST00000482873 PLIN1O60240 522 aa20.2■□□□□ 0.82
DDR1-244ENST00000482873 PARD3Q8TEW0 1356 aa20.19■□□□□ 0.82
DDR1-244ENST00000482873 CHGAP10645 457 aaKnown RBP20.19■□□□□ 0.82
DDR1-244ENST00000482873 GPRASP1Q5JY77 1395 aa20.19■□□□□ 0.82
DDR1-244ENST00000482873 IQGAP3Q86VI3 1631 aa20.18■□□□□ 0.82
DDR1-244ENST00000482873 PLXNC1O60486 1568 aa20.17■□□□□ 0.82
DDR1-244ENST00000482873 ABCC1P33527 1531 aa20.17■□□□□ 0.82
DDR1-244ENST00000482873 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
DDR1-244ENST00000482873 COL17A1Q9UMD9 1497 aaPredicted RBP20.17■□□□□ 0.82
DDR1-244ENST00000482873 IL27Q8NEV9 243 aa20.17■□□□□ 0.82
DDR1-244ENST00000482873 PDE4AP27815 886 aa20.16■□□□□ 0.82
DDR1-244ENST00000482873 CFAP70Q5T0N1 1121 aa20.16■□□□□ 0.82
DDR1-244ENST00000482873 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
DDR1-244ENST00000482873 RCAN3Q9UKA8 241 aa20.15■□□□□ 0.82
DDR1-244ENST00000482873 LAS1LQ9Y4W2 734 aaKnown RBP20.15■□□□□ 0.82
DDR1-244ENST00000482873 ADAMTS8Q9UP79 889 aa20.14■□□□□ 0.82
DDR1-244ENST00000482873 KNSTRNQ9Y448 316 aa20.14■□□□□ 0.82
DDR1-244ENST00000482873 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
DDR1-244ENST00000482873 BACH2Q9BYV9 841 aa20.12■□□□□ 0.81
DDR1-244ENST00000482873 FANCAO15360 1455 aa20.12■□□□□ 0.81
DDR1-244ENST00000482873 E9PCH4 1651 aa20.12■□□□□ 0.81
DDR1-244ENST00000482873 ATP10AO60312 1499 aa20.11■□□□□ 0.81
DDR1-244ENST00000482873 NEFMP07197 916 aa20.11■□□□□ 0.81
DDR1-244ENST00000482873 UGGT1Q9NYU2 1555 aa20.1■□□□□ 0.81
DDR1-244ENST00000482873 ADGRF5Q8IZF2 1346 aa20.1■□□□□ 0.81
DDR1-244ENST00000482873 GGT6Q6P531 493 aa20.1■□□□□ 0.81
DDR1-244ENST00000482873 SKAP1Q86WV1 359 aa20.1■□□□□ 0.81
DDR1-244ENST00000482873 NUTM2DQ5VT03 806 aaPredicted RBP20.1■□□□□ 0.81
DDR1-244ENST00000482873 MAGI2Q86UL8 1455 aa20.09■□□□□ 0.81
DDR1-244ENST00000482873 UHRF1BP1LA0JNW5 1464 aa20.08■□□□□ 0.81
DDR1-244ENST00000482873 CCDC146Q8IYE0 955 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms