RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 SPATA31E1Q6ZUB1 1445 aa19.17■□□□□ 0.66
COL9A2-207ENST00000482722 MBD5Q9P267 1494 aa19.16■□□□□ 0.66
COL9A2-207ENST00000482722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL9A2-207ENST00000482722 SAMD9LQ8IVG5 1584 aa19.16■□□□□ 0.66
COL9A2-207ENST00000482722 USP47Q96K76 1375 aa19.15■□□□□ 0.66
COL9A2-207ENST00000482722 RGL3Q3MIN7 710 aa19.15■□□□□ 0.66
COL9A2-207ENST00000482722 ABCC2Q92887 1545 aa19.15■□□□□ 0.66
COL9A2-207ENST00000482722 SYCP2Q9BX26 1530 aa19.14■□□□□ 0.65
COL9A2-207ENST00000482722 NPM2Q86SE8 214 aaKnown RBP19.14■□□□□ 0.65
COL9A2-207ENST00000482722 KIAA1107Q9UPP5 1409 aa19.13■□□□□ 0.65
COL9A2-207ENST00000482722 CLASP1Q7Z460 1538 aa19.12■□□□□ 0.65
COL9A2-207ENST00000482722 LAS1LQ9Y4W2 734 aaKnown RBP19.12■□□□□ 0.65
COL9A2-207ENST00000482722 CROCC2H7BZ55 1655 aa19.1■□□□□ 0.65
COL9A2-207ENST00000482722 CARD11Q9BXL7 1154 aa19.1■□□□□ 0.65
COL9A2-207ENST00000482722 NEFMP07197 916 aa19.1■□□□□ 0.65
COL9A2-207ENST00000482722 ARHGEF12Q9NZN5 1544 aa19.1■□□□□ 0.65
COL9A2-207ENST00000482722 ADGRL2O95490 1459 aa19.09■□□□□ 0.65
COL9A2-207ENST00000482722 ADGBQ8N7X0 1667 aa19.09■□□□□ 0.65
COL9A2-207ENST00000482722 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.09■□□□□ 0.65
COL9A2-207ENST00000482722 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
COL9A2-207ENST00000482722 ZCCHC11Q5TAX3 1644 aaKnown RBP19.08■□□□□ 0.64
COL9A2-207ENST00000482722 DCAF11Q8TEB1 546 aa19.08■□□□□ 0.64
COL9A2-207ENST00000482722 EFCAB2Q5VUJ9 269 aa19.07■□□□□ 0.64
COL9A2-207ENST00000482722 DHX29Q7Z478 1369 aaKnown RBP19.07■□□□□ 0.64
COL9A2-207ENST00000482722 TMC1Q8TDI8 760 aa19.07■□□□□ 0.64
COL9A2-207ENST00000482722 CCDC141Q6ZP82 1450 aa19.06■□□□□ 0.64
COL9A2-207ENST00000482722 PREX2Q70Z35 1606 aa19.05■□□□□ 0.64
COL9A2-207ENST00000482722 PLEKHH2Q8IVE3 1493 aa19.04■□□□□ 0.64
COL9A2-207ENST00000482722 TRAPPC8Q9Y2L5 1435 aa19.04■□□□□ 0.64
COL9A2-207ENST00000482722 BCORL1Q5H9F3 1711 aa19.04■□□□□ 0.64
COL9A2-207ENST00000482722 POLR1AO95602 1720 aaPredicted RBP19.04■□□□□ 0.64
COL9A2-207ENST00000482722 PNISRQ8TF01 805 aaKnown RBP19.03■□□□□ 0.64
COL9A2-207ENST00000482722 USP35Q9P2H5 1018 aa19.03■□□□□ 0.64
COL9A2-207ENST00000482722 ST20-MTHFSA0A0A6YYL1 179 aa19.03■□□□□ 0.64
COL9A2-207ENST00000482722 WASHC2CQ9Y4E1 1318 aa19.01■□□□□ 0.63
COL9A2-207ENST00000482722 PDE4AP27815 886 aa19.01■□□□□ 0.63
COL9A2-207ENST00000482722 PLCH2O75038 1416 aa18.99■□□□□ 0.63
COL9A2-207ENST00000482722 TCERG1O14776 1098 aaKnown RBP18.99■□□□□ 0.63
COL9A2-207ENST00000482722 EXOC6Q8TAG9 804 aa18.99■□□□□ 0.63
COL9A2-207ENST00000482722 RSPH4AQ5TD94 716 aa18.99■□□□□ 0.63
COL9A2-207ENST00000482722 MYO5CQ9NQX4 1742 aa18.98■□□□□ 0.63
COL9A2-207ENST00000482722 SHANK2Q9UPX8 1470 aa18.98■□□□□ 0.63
COL9A2-207ENST00000482722 SPAG9O60271 1321 aaKnown RBP18.96■□□□□ 0.63
COL9A2-207ENST00000482722 BACH2Q9BYV9 841 aa18.96■□□□□ 0.63
COL9A2-207ENST00000482722 KDM5CP41229 1560 aa18.96■□□□□ 0.63
COL9A2-207ENST00000482722 ARHGEF5Q12774 1597 aa18.96■□□□□ 0.63
COL9A2-207ENST00000482722 PPM1GO15355 546 aaPredicted RBP18.95■□□□□ 0.62
COL9A2-207ENST00000482722 RRP1P56182 461 aaKnown RBP18.95■□□□□ 0.62
COL9A2-207ENST00000482722 BRPF3Q9ULD4 1205 aa18.95■□□□□ 0.62
COL9A2-207ENST00000482722 NPM1P06748 294 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL9A2-207ENST00000482722 NBPF1Q3BBV0 1214 aa18.94■□□□□ 0.62
COL9A2-207ENST00000482722 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
COL9A2-207ENST00000482722 FAM135AQ9P2D6 1515 aa18.93■□□□□ 0.62
COL9A2-207ENST00000482722 CYB5RLQ6IPT4 315 aa18.93■□□□□ 0.62
COL9A2-207ENST00000482722 SKAP1Q86WV1 359 aa18.92■□□□□ 0.62
COL9A2-207ENST00000482722 RALGAPBQ86X10 1494 aa18.92■□□□□ 0.62
COL9A2-207ENST00000482722 ASXL2Q76L83 1435 aa18.92■□□□□ 0.62
COL9A2-207ENST00000482722 UHRF1BP1LA0JNW5 1464 aa18.91■□□□□ 0.62
COL9A2-207ENST00000482722 KIF3BO15066 747 aa18.91■□□□□ 0.62
COL9A2-207ENST00000482722 SCAPERQ9BY12 1400 aa18.9■□□□□ 0.62
COL9A2-207ENST00000482722 ARID4BQ4LE39 1312 aaPredicted RBP18.9■□□□□ 0.62
COL9A2-207ENST00000482722 RCAN3Q9UKA8 241 aa18.89■□□□□ 0.61
COL9A2-207ENST00000482722 MS4A1P11836 297 aa18.89■□□□□ 0.61
COL9A2-207ENST00000482722 WDR7Q9Y4E6 1490 aa18.89■□□□□ 0.61
COL9A2-207ENST00000482722 UHRF1BP1Q6BDS2 1440 aa18.88■□□□□ 0.61
COL9A2-207ENST00000482722 PLA2R1Q13018 1463 aa18.88■□□□□ 0.61
COL9A2-207ENST00000482722 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
COL9A2-207ENST00000482722 PLIN1O60240 522 aa18.87■□□□□ 0.61
COL9A2-207ENST00000482722 GSE1Q14687 1217 aa18.87■□□□□ 0.61
COL9A2-207ENST00000482722 UBE2Q2Q8WVN8 375 aa18.87■□□□□ 0.61
COL9A2-207ENST00000482722 FANCAO15360 1455 aa18.86■□□□□ 0.61
COL9A2-207ENST00000482722 CDCA7LQ96GN5 454 aa18.86■□□□□ 0.61
COL9A2-207ENST00000482722 CCDC144AA2RUR9 1427 aa18.86■□□□□ 0.61
COL9A2-207ENST00000482722 MYBBP1AQ9BQG0 1328 aaKnown RBP18.85■□□□□ 0.61
COL9A2-207ENST00000482722 LRPPRCP42704 1394 aaKnown RBP18.84■□□□□ 0.61
COL9A2-207ENST00000482722 RAPGEF3O95398 923 aa18.83■□□□□ 0.61
COL9A2-207ENST00000482722 ABCC1P33527 1531 aa18.83■□□□□ 0.6
COL9A2-207ENST00000482722 CC2D1BQ5T0F9 858 aaKnown RBP18.83■□□□□ 0.6
COL9A2-207ENST00000482722 NFKBIBQ15653 356 aa18.82■□□□□ 0.6
COL9A2-207ENST00000482722 RALBP1Q15311 655 aa18.81■□□□□ 0.6
COL9A2-207ENST00000482722 DDRGK1Q96HY6 314 aa18.81■□□□□ 0.6
COL9A2-207ENST00000482722 CFAP65Q6ZU64 1925 aaKnown RBP18.8■□□□□ 0.6
COL9A2-207ENST00000482722 FRAT1Q92837 279 aaPredicted RBP18.8■□□□□ 0.6
COL9A2-207ENST00000482722 ADGRL1O94910 1474 aa18.8■□□□□ 0.6
COL9A2-207ENST00000482722 GGT6Q6P531 493 aa18.79■□□□□ 0.6
COL9A2-207ENST00000482722 SLC4A3P48751 1232 aa18.79■□□□□ 0.6
COL9A2-207ENST00000482722 EIF5BO60841 1220 aaKnown RBP18.79■□□□□ 0.6
COL9A2-207ENST00000482722 BRD4O60885 1362 aaPredicted RBP18.78■□□□□ 0.6
COL9A2-207ENST00000482722 KDM5DQ9BY66 1539 aa18.78■□□□□ 0.6
COL9A2-207ENST00000482722 KTN1Q86UP2 1357 aaKnown RBP18.77■□□□□ 0.6
COL9A2-207ENST00000482722 DUOX2Q9NRD8 1548 aa18.77■□□□□ 0.6
COL9A2-207ENST00000482722 NLRP13Q86W25 1043 aa18.75■□□□□ 0.59
COL9A2-207ENST00000482722 PRAG1Q86YV5 1406 aa18.75■□□□□ 0.59
COL9A2-207ENST00000482722 MAST1Q9Y2H9 1570 aa18.75■□□□□ 0.59
COL9A2-207ENST00000482722 CHGAP10645 457 aaKnown RBP18.74■□□□□ 0.59
COL9A2-207ENST00000482722 CRBNQ96SW2 442 aa18.74■□□□□ 0.59
COL9A2-207ENST00000482722 CD109Q6YHK3 1445 aa18.73■□□□□ 0.59
COL9A2-207ENST00000482722 A2MP01023 1474 aa18.73■□□□□ 0.59
COL9A2-207ENST00000482722 PANK3Q9H999 370 aa18.72■□□□□ 0.59
COL9A2-207ENST00000482722 PLXNC1O60486 1568 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms