RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 TSPY10P0CW01 314 aa15.4■□□□□ 0.06
SPTLC1-206ENST00000482632 CROCC2H7BZ55 1655 aa15.39■□□□□ 0.05
SPTLC1-206ENST00000482632 RSPH4AQ5TD94 716 aa15.39■□□□□ 0.05
SPTLC1-206ENST00000482632 REREQ9P2R6 1566 aa15.38■□□□□ 0.05
SPTLC1-206ENST00000482632 A2MP01023 1474 aa15.37■□□□□ 0.05
SPTLC1-206ENST00000482632 DNMT1P26358 1616 aaKnown RBP15.36■□□□□ 0.05
SPTLC1-206ENST00000482632 ILDR2Q71H61 639 aa15.36■□□□□ 0.05
SPTLC1-206ENST00000482632 RTEL1-TNFRSF6BF6WH68 1400 aa15.35■□□□□ 0.05
SPTLC1-206ENST00000482632 TCOF1Q13428 1488 aaKnown RBP15.35■□□□□ 0.05
SPTLC1-206ENST00000482632 ESF1Q9H501 851 aaKnown RBP15.35■□□□□ 0.05
SPTLC1-206ENST00000482632 DAPK1P53355 1430 aa15.34■□□□□ 0.05
SPTLC1-206ENST00000482632 MAST1Q9Y2H9 1570 aa15.33■□□□□ 0.05
SPTLC1-206ENST00000482632 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
SPTLC1-206ENST00000482632 CHIC2Q9UKJ5 165 aa15.33■□□□□ 0.04
SPTLC1-206ENST00000482632 PTPRMP28827 1452 aa15.33■□□□□ 0.04
SPTLC1-206ENST00000482632 AGLP35573 1532 aa15.33■□□□□ 0.04
SPTLC1-206ENST00000482632 PLXNC1O60486 1568 aa15.32■□□□□ 0.04
SPTLC1-206ENST00000482632 GGT6Q6P531 493 aa15.31■□□□□ 0.04
SPTLC1-206ENST00000482632 ABCC5O15440 1437 aa15.31■□□□□ 0.04
SPTLC1-206ENST00000482632 ITGAEP38570 1179 aa15.3■□□□□ 0.04
SPTLC1-206ENST00000482632 SHANK2Q9UPX8 1470 aa15.29■□□□□ 0.04
SPTLC1-206ENST00000482632 DHX29Q7Z478 1369 aaKnown RBP15.29■□□□□ 0.04
SPTLC1-206ENST00000482632 KIF3BO15066 747 aa15.29■□□□□ 0.04
SPTLC1-206ENST00000482632 CLTCQ00610 1675 aaKnown RBP15.28■□□□□ 0.04
SPTLC1-206ENST00000482632 SOCS7O14512 581 aa15.28■□□□□ 0.04
SPTLC1-206ENST00000482632 RRP7BPQ9NSQ0 103 aa15.28■□□□□ 0.04
SPTLC1-206ENST00000482632 KIF15Q9NS87 1388 aa15.26■□□□□ 0.03
SPTLC1-206ENST00000482632 ANKRD30AQ9BXX3 1397 aa15.25■□□□□ 0.03
SPTLC1-206ENST00000482632 DUOX2Q9NRD8 1548 aa15.25■□□□□ 0.03
SPTLC1-206ENST00000482632 C3P01024 1663 aa15.25■□□□□ 0.03
SPTLC1-206ENST00000482632 CEBPAP49715 358 aaPredicted RBP15.24■□□□□ 0.03
SPTLC1-206ENST00000482632 EIF2AK4Q9P2K8 1649 aaKnown RBP15.23■□□□□ 0.03
SPTLC1-206ENST00000482632 MROH2AA6NES4 1674 aa15.22■□□□□ 0.03
SPTLC1-206ENST00000482632 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
SPTLC1-206ENST00000482632 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
SPTLC1-206ENST00000482632 CNTLNQ9NXG0 1405 aa15.22■□□□□ 0.03
SPTLC1-206ENST00000482632 DISP3Q9P2K9 1392 aa15.22■□□□□ 0.03
SPTLC1-206ENST00000482632 CEP152O94986 1710 aa15.2■□□□□ 0.02
SPTLC1-206ENST00000482632 RNF17Q9BXT8 1623 aaKnown RBP15.2■□□□□ 0.02
SPTLC1-206ENST00000482632 CAPN15O75808 1086 aa15.19■□□□□ 0.02
SPTLC1-206ENST00000482632 CFAP65Q6ZU64 1925 aaKnown RBP15.19■□□□□ 0.02
SPTLC1-206ENST00000482632 ERBINQ96RT1 1412 aa15.18■□□□□ 0.02
SPTLC1-206ENST00000482632 RRBP1Q9P2E9 1410 aaKnown RBP15.18■□□□□ 0.02
SPTLC1-206ENST00000482632 KDM5DQ9BY66 1539 aa15.18■□□□□ 0.02
SPTLC1-206ENST00000482632 ADGRL2O95490 1459 aa15.18■□□□□ 0.02
SPTLC1-206ENST00000482632 PREX1Q8TCU6 1659 aa15.18■□□□□ 0.02
SPTLC1-206ENST00000482632 WASHC2CQ9Y4E1 1318 aa15.17■□□□□ 0.02
SPTLC1-206ENST00000482632 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
SPTLC1-206ENST00000482632 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
SPTLC1-206ENST00000482632 SETD1BQ9UPS6 1966 aaKnown RBP15.16■□□□□ 0.02
SPTLC1-206ENST00000482632 ZC3H13Q5T200 1668 aaKnown RBP15.16■□□□□ 0.02
SPTLC1-206ENST00000482632 ZMYM3Q14202 1370 aa15.15■□□□□ 0.02
SPTLC1-206ENST00000482632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.15■□□□□ 0.02
SPTLC1-206ENST00000482632 DSG3P32926 999 aa15.14■□□□□ 0.01
SPTLC1-206ENST00000482632 CERKQ8TCT0 537 aa15.14■□□□□ 0.01
SPTLC1-206ENST00000482632 MROH1Q8NDA8 1641 aa15.14■□□□□ 0.01
SPTLC1-206ENST00000482632 KANK1Q14678 1352 aa15.13■□□□□ 0.01
SPTLC1-206ENST00000482632 ANKRD50Q9ULJ7 1429 aa15.13■□□□□ 0.01
SPTLC1-206ENST00000482632 ABCC3O15438 1527 aa15.12■□□□□ 0.01
SPTLC1-206ENST00000482632 FAM135AQ9P2D6 1515 aa15.12■□□□□ 0.01
SPTLC1-206ENST00000482632 UHRF1BP1Q6BDS2 1440 aa15.12■□□□□ 0.01
SPTLC1-206ENST00000482632 HSPA2P54652 639 aa15.12■□□□□ 0.01
SPTLC1-206ENST00000482632 DEPDC5O75140 1603 aa15.12■□□□□ 0.01
SPTLC1-206ENST00000482632 CAMSAP1Q5T5Y3 1602 aa15.12■□□□□ 0.01
SPTLC1-206ENST00000482632 PRDM15P57071 1507 aaPredicted RBP15.11■□□□□ 0.01
SPTLC1-206ENST00000482632 ROCK1Q13464 1354 aa15.11■□□□□ 0.01
SPTLC1-206ENST00000482632 MYO3AQ8NEV4 1616 aa15.08■□□□□ 0
SPTLC1-206ENST00000482632 GCC2Q8IWJ2 1684 aa15.08■□□□□ 0
SPTLC1-206ENST00000482632 NPATQ14207 1427 aa15.08■□□□□ 0
SPTLC1-206ENST00000482632 PZPP20742 1482 aa15.08■□□□□ 0
SPTLC1-206ENST00000482632 FBXO31Q5XUX0 539 aaPredicted RBP15.07■□□□□ 0
SPTLC1-206ENST00000482632 ATF5Q9Y2D1 282 aaPredicted RBP15.05■□□□□ -0
SPTLC1-206ENST00000482632 TNRQ92752 1358 aa15.05■□□□□ -0
SPTLC1-206ENST00000482632 UNC13BO14795 1591 aa15.05■□□□□ -0
SPTLC1-206ENST00000482632 ZNF142P52746 1687 aaPredicted RBP15.03■□□□□ -0
SPTLC1-206ENST00000482632 CEP170BQ9Y4F5 1589 aaPredicted RBP15.02■□□□□ -0
SPTLC1-206ENST00000482632 VWDEQ8N2E2 1590 aa15.02□□□□□ -0.01
SPTLC1-206ENST00000482632 ERVK-7P63135 1459 aa15.01□□□□□ -0.01
SPTLC1-206ENST00000482632 TET3O43151 1660 aa15.01□□□□□ -0.01
SPTLC1-206ENST00000482632 NAIPQ13075 1403 aa15□□□□□ -0.01
SPTLC1-206ENST00000482632 EFCAB6Q5THR3 1501 aa15□□□□□ -0.01
SPTLC1-206ENST00000482632 NUP155O75694 1391 aa14.99□□□□□ -0.01
SPTLC1-206ENST00000482632 IQGAP3Q86VI3 1631 aa14.99□□□□□ -0.01
SPTLC1-206ENST00000482632 SPATA31D1Q6ZQQ2 1576 aa14.99□□□□□ -0.01
SPTLC1-206ENST00000482632 TRIM52Q96A61 297 aa14.99□□□□□ -0.01
SPTLC1-206ENST00000482632 LMTK2Q8IWU2 1503 aa14.98□□□□□ -0.01
SPTLC1-206ENST00000482632 A2ML1A8K2U0 1454 aa14.98□□□□□ -0.01
SPTLC1-206ENST00000482632 HFM1A2PYH4 1435 aa14.98□□□□□ -0.01
SPTLC1-206ENST00000482632 E9PCH4 1651 aa14.97□□□□□ -0.01
SPTLC1-206ENST00000482632 STRCQ7RTU9 1775 aa14.96□□□□□ -0.01
SPTLC1-206ENST00000482632 ARHGAP31Q2M1Z3 1444 aa14.96□□□□□ -0.01
SPTLC1-206ENST00000482632 NLRP1Q9C000 1473 aa14.95□□□□□ -0.02
SPTLC1-206ENST00000482632 UGGT1Q9NYU2 1555 aa14.95□□□□□ -0.02
SPTLC1-206ENST00000482632 STAG3Q9UJ98 1225 aa14.95□□□□□ -0.02
SPTLC1-206ENST00000482632 ZNF219Q9P2Y4 722 aaPredicted RBP14.94□□□□□ -0.02
SPTLC1-206ENST00000482632 PIK3C2BO00750 1634 aa14.93□□□□□ -0.02
SPTLC1-206ENST00000482632 POLR1AO95602 1720 aaPredicted RBP14.93□□□□□ -0.02
SPTLC1-206ENST00000482632 SYNMO15061 1565 aa14.93□□□□□ -0.02
SPTLC1-206ENST00000482632 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
SPTLC1-206ENST00000482632 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms