RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 RGS3P49796 1198 aa12.02□□□□□ -0.48
CALD1-220ENST00000482470 CDCA7LQ96GN5 454 aa12.02□□□□□ -0.48
CALD1-220ENST00000482470 TRAK1Q9UPV9 953 aa12.02□□□□□ -0.48
CALD1-220ENST00000482470 MAGI1Q96QZ7 1491 aaPredicted RBP12.02□□□□□ -0.49
CALD1-220ENST00000482470 PNISRQ8TF01 805 aaKnown RBP12.02□□□□□ -0.49
CALD1-220ENST00000482470 PPM1GO15355 546 aaPredicted RBP12.01□□□□□ -0.49
CALD1-220ENST00000482470 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
CALD1-220ENST00000482470 ARHGAP5Q13017 1502 aa12.01□□□□□ -0.49
CALD1-220ENST00000482470 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
CALD1-220ENST00000482470 RTN4Q9NQC3 1192 aaKnown RBP12.01□□□□□ -0.49
CALD1-220ENST00000482470 ADAMTS12P58397 1594 aa12□□□□□ -0.49
CALD1-220ENST00000482470 SAMD9Q5K651 1589 aa12□□□□□ -0.49
CALD1-220ENST00000482470 MLECQ14165 292 aa12□□□□□ -0.49
CALD1-220ENST00000482470 ESF1Q9H501 851 aaKnown RBP12□□□□□ -0.49
CALD1-220ENST00000482470 DISP1Q96F81 1524 aa12□□□□□ -0.49
CALD1-220ENST00000482470 WDR62O43379 1518 aa11.99□□□□□ -0.49
CALD1-220ENST00000482470 TCOF1Q13428 1488 aaKnown RBP11.99□□□□□ -0.49
CALD1-220ENST00000482470 ATP10BO94823 1461 aa11.98□□□□□ -0.49
CALD1-220ENST00000482470 MORC1Q86VD1 984 aa11.98□□□□□ -0.49
CALD1-220ENST00000482470 NEFMP07197 916 aa11.98□□□□□ -0.49
CALD1-220ENST00000482470 LAS1LQ9Y4W2 734 aaKnown RBP11.98□□□□□ -0.49
CALD1-220ENST00000482470 CFAP70Q5T0N1 1121 aa11.97□□□□□ -0.49
CALD1-220ENST00000482470 NOP58Q9Y2X3 529 aaKnown RBP11.97□□□□□ -0.49
CALD1-220ENST00000482470 TARBP1Q13395 1621 aaKnown RBP11.96□□□□□ -0.49
CALD1-220ENST00000482470 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
CALD1-220ENST00000482470 RRP1P56182 461 aaKnown RBP11.96□□□□□ -0.49
CALD1-220ENST00000482470 WASHC2CQ9Y4E1 1318 aa11.96□□□□□ -0.49
CALD1-220ENST00000482470 KDM6BO15054 1643 aa11.96□□□□□ -0.5
CALD1-220ENST00000482470 RAPGEF6Q8TEU7 1601 aa11.96□□□□□ -0.5
CALD1-220ENST00000482470 POGKQ9P215 609 aa11.96□□□□□ -0.5
CALD1-220ENST00000482470 ADAMTS8Q9UP79 889 aa11.95□□□□□ -0.5
CALD1-220ENST00000482470 SRPK2P78362 688 aaKnown RBP11.95□□□□□ -0.5
CALD1-220ENST00000482470 RRP7AQ9Y3A4 280 aaKnown RBP11.95□□□□□ -0.5
CALD1-220ENST00000482470 ARID4BQ4LE39 1312 aaPredicted RBP11.95□□□□□ -0.5
CALD1-220ENST00000482470 KIAA0556O60303 1618 aa11.95□□□□□ -0.5
CALD1-220ENST00000482470 SLC24A1O60721 1099 aa11.94□□□□□ -0.5
CALD1-220ENST00000482470 TMEM132EQ6IEE7 984 aa11.94□□□□□ -0.5
CALD1-220ENST00000482470 APAF1O14727 1248 aa11.93□□□□□ -0.5
CALD1-220ENST00000482470 CFAP53Q96M91 514 aa11.93□□□□□ -0.5
CALD1-220ENST00000482470 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
CALD1-220ENST00000482470 CRBNQ96SW2 442 aa11.92□□□□□ -0.5
CALD1-220ENST00000482470 PDE3BQ13370 1112 aa11.92□□□□□ -0.5
CALD1-220ENST00000482470 PLEKHH2Q8IVE3 1493 aa11.91□□□□□ -0.5
CALD1-220ENST00000482470 SCAPERQ9BY12 1400 aa11.91□□□□□ -0.5
CALD1-220ENST00000482470 CCDC141Q6ZP82 1450 aa11.91□□□□□ -0.5
CALD1-220ENST00000482470 BRD4O60885 1362 aaPredicted RBP11.91□□□□□ -0.5
CALD1-220ENST00000482470 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
CALD1-220ENST00000482470 EIF4G3O43432 1585 aaKnown RBP11.9□□□□□ -0.5
CALD1-220ENST00000482470 PZPP20742 1482 aa11.9□□□□□ -0.5
CALD1-220ENST00000482470 U2AF1L5P0DN76 240 aaPredicted RBP11.9□□□□□ -0.5
CALD1-220ENST00000482470 U2AF1Q01081 240 aaKnown RBP eCLIP11.9□□□□□ -0.5
CALD1-220ENST00000482470 EIF5BO60841 1220 aaKnown RBP11.89□□□□□ -0.51
CALD1-220ENST00000482470 DEKP35659 375 aaKnown RBP11.89□□□□□ -0.51
CALD1-220ENST00000482470 CYB5RLQ6IPT4 315 aa11.89□□□□□ -0.51
CALD1-220ENST00000482470 CLUAP1Q96AJ1 413 aa11.89□□□□□ -0.51
CALD1-220ENST00000482470 BCL2L13Q9BXK5 485 aa11.89□□□□□ -0.51
CALD1-220ENST00000482470 KIF14Q15058 1648 aa11.88□□□□□ -0.51
CALD1-220ENST00000482470 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
CALD1-220ENST00000482470 PPP2R1AP30153 589 aa11.87□□□□□ -0.51
CALD1-220ENST00000482470 SKAP1Q86WV1 359 aa11.87□□□□□ -0.51
CALD1-220ENST00000482470 EIF3AQ14152 1382 aaKnown RBP11.87□□□□□ -0.51
CALD1-220ENST00000482470 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
CALD1-220ENST00000482470 MSH5O43196 834 aa11.86□□□□□ -0.51
CALD1-220ENST00000482470 TEX14Q8IWB6 1497 aa11.86□□□□□ -0.51
CALD1-220ENST00000482470 FTSJ3Q8IY81 847 aaKnown RBP11.85□□□□□ -0.51
CALD1-220ENST00000482470 TCERG1O14776 1098 aaKnown RBP11.85□□□□□ -0.51
CALD1-220ENST00000482470 SOX12O15370 315 aa11.85□□□□□ -0.51
CALD1-220ENST00000482470 RAPGEF3O95398 923 aa11.85□□□□□ -0.51
CALD1-220ENST00000482470 FANCIQ9NVI1 1328 aa11.85□□□□□ -0.51
CALD1-220ENST00000482470 PDE4AP27815 886 aa11.85□□□□□ -0.51
CALD1-220ENST00000482470 SLC12A5Q9H2X9 1139 aa11.85□□□□□ -0.51
CALD1-220ENST00000482470 MAPK8IP3Q9UPT6 1336 aa11.85□□□□□ -0.51
CALD1-220ENST00000482470 DISP3Q9P2K9 1392 aa11.84□□□□□ -0.51
CALD1-220ENST00000482470 SMG6Q86US8 1419 aaKnown RBP11.84□□□□□ -0.51
CALD1-220ENST00000482470 ERBINQ96RT1 1412 aa11.84□□□□□ -0.51
CALD1-220ENST00000482470 IPO9Q96P70 1041 aaKnown RBP11.84□□□□□ -0.51
CALD1-220ENST00000482470 ARXQ96QS3 562 aa11.84□□□□□ -0.51
CALD1-220ENST00000482470 DNMT1P26358 1616 aaKnown RBP11.84□□□□□ -0.51
CALD1-220ENST00000482470 DENND4BO75064 1496 aaPredicted RBP11.84□□□□□ -0.51
CALD1-220ENST00000482470 CEP170Q5SW79 1584 aa11.83□□□□□ -0.52
CALD1-220ENST00000482470 SLC4A3P48751 1232 aa11.83□□□□□ -0.52
CALD1-220ENST00000482470 UPF2Q9HAU5 1272 aaKnown RBP11.83□□□□□ -0.52
CALD1-220ENST00000482470 NUP160Q12769 1436 aa11.83□□□□□ -0.52
CALD1-220ENST00000482470 DHX29Q7Z478 1369 aaKnown RBP11.83□□□□□ -0.52
CALD1-220ENST00000482470 MINK1Q8N4C8 1332 aaPredicted RBP11.83□□□□□ -0.52
CALD1-220ENST00000482470 CENPJQ9HC77 1338 aaPredicted RBP11.82□□□□□ -0.52
CALD1-220ENST00000482470 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
CALD1-220ENST00000482470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.81□□□□□ -0.52
CALD1-220ENST00000482470 CABP2Q9NPB3 220 aa11.81□□□□□ -0.52
CALD1-220ENST00000482470 COG6Q9Y2V7 657 aa11.81□□□□□ -0.52
CALD1-220ENST00000482470 ADGRF5Q8IZF2 1346 aa11.81□□□□□ -0.52
CALD1-220ENST00000482470 SYCP2Q9BX26 1530 aa11.81□□□□□ -0.52
CALD1-220ENST00000482470 NUTM2FA1L443 756 aa11.8□□□□□ -0.52
CALD1-220ENST00000482470 C20orf194Q5TEA3 1177 aa11.8□□□□□ -0.52
CALD1-220ENST00000482470 TESK2Q96S53 571 aa11.8□□□□□ -0.52
CALD1-220ENST00000482470 SPATA31E1Q6ZUB1 1445 aa11.8□□□□□ -0.52
CALD1-220ENST00000482470 DDRGK1Q96HY6 314 aa11.79□□□□□ -0.52
CALD1-220ENST00000482470 TRAPPC8Q9Y2L5 1435 aa11.78□□□□□ -0.52
CALD1-220ENST00000482470 VGFO15240 615 aaPredicted RBP11.78□□□□□ -0.52
CALD1-220ENST00000482470 BCAR3O75815 825 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms