RNA–Protein interactions for RNA: ENST00000482183.1

CAPN8-208, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-208ENST00000482183 KIF7Q2M1P5 1343 aa13.7□□□□□ -0.22
CAPN8-208ENST00000482183 HNRNPUQ00839 825 aaKnown RBP eCLIP13.7□□□□□ -0.22
CAPN8-208ENST00000482183 IQGAP3Q86VI3 1631 aa13.69□□□□□ -0.22
CAPN8-208ENST00000482183 RALBP1Q15311 655 aa13.69□□□□□ -0.22
CAPN8-208ENST00000482183 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
CAPN8-208ENST00000482183 ZBED9Q6R2W3 1325 aa13.68□□□□□ -0.22
CAPN8-208ENST00000482183 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
CAPN8-208ENST00000482183 LAMC1P11047 1609 aa13.68□□□□□ -0.22
CAPN8-208ENST00000482183 MAGI2Q86UL8 1455 aa13.67□□□□□ -0.22
CAPN8-208ENST00000482183 KDM5CP41229 1560 aa13.67□□□□□ -0.22
CAPN8-208ENST00000482183 KANK1Q14678 1352 aa13.67□□□□□ -0.22
CAPN8-208ENST00000482183 FKBP8Q14318 412 aa13.66□□□□□ -0.22
CAPN8-208ENST00000482183 CDCA8Q53HL2 280 aa13.66□□□□□ -0.22
CAPN8-208ENST00000482183 KCNH8Q96L42 1107 aa13.66□□□□□ -0.22
CAPN8-208ENST00000482183 TTC37Q6PGP7 1564 aa13.65□□□□□ -0.22
CAPN8-208ENST00000482183 ZCCHC11Q5TAX3 1644 aaKnown RBP13.64□□□□□ -0.23
CAPN8-208ENST00000482183 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
CAPN8-208ENST00000482183 DCAF11Q8TEB1 546 aa13.64□□□□□ -0.23
CAPN8-208ENST00000482183 ABCC1P33527 1531 aa13.64□□□□□ -0.23
CAPN8-208ENST00000482183 SPAG9O60271 1321 aaKnown RBP13.63□□□□□ -0.23
CAPN8-208ENST00000482183 INSRP06213 1382 aa13.62□□□□□ -0.23
CAPN8-208ENST00000482183 ZNF326Q5BKZ1 582 aaKnown RBP13.62□□□□□ -0.23
CAPN8-208ENST00000482183 PRAG1Q86YV5 1406 aa13.62□□□□□ -0.23
CAPN8-208ENST00000482183 NEURL4Q96JN8 1562 aa13.62□□□□□ -0.23
CAPN8-208ENST00000482183 BRD4O60885 1362 aaPredicted RBP13.61□□□□□ -0.23
CAPN8-208ENST00000482183 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
CAPN8-208ENST00000482183 TMC1Q8TDI8 760 aa13.59□□□□□ -0.23
CAPN8-208ENST00000482183 ZMYM4Q5VZL5 1548 aa13.58□□□□□ -0.24
CAPN8-208ENST00000482183 MYBBP1AQ9BQG0 1328 aaKnown RBP13.58□□□□□ -0.24
CAPN8-208ENST00000482183 C11orf95C9JLR9 678 aaPredicted RBP13.57□□□□□ -0.24
CAPN8-208ENST00000482183 TMF1P82094 1093 aa13.57□□□□□ -0.24
CAPN8-208ENST00000482183 CFAP74Q9C0B2 1584 aa13.57□□□□□ -0.24
CAPN8-208ENST00000482183 EIF3AQ14152 1382 aaKnown RBP13.57□□□□□ -0.24
CAPN8-208ENST00000482183 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
CAPN8-208ENST00000482183 TRPM1Q7Z4N2 1603 aa13.56□□□□□ -0.24
CAPN8-208ENST00000482183 ABCA9Q8IUA7 1624 aa13.55□□□□□ -0.24
CAPN8-208ENST00000482183 PDE3BQ13370 1112 aa13.55□□□□□ -0.24
CAPN8-208ENST00000482183 FAM9BQ8IZU0 186 aa13.55□□□□□ -0.24
CAPN8-208ENST00000482183 PPP4R2Q9NY27 417 aa13.55□□□□□ -0.24
CAPN8-208ENST00000482183 KDM2AQ9Y2K7 1162 aa13.55□□□□□ -0.24
CAPN8-208ENST00000482183 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
CAPN8-208ENST00000482183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
CAPN8-208ENST00000482183 FANCAO15360 1455 aa13.54□□□□□ -0.24
CAPN8-208ENST00000482183 PRDM15P57071 1507 aaPredicted RBP13.54□□□□□ -0.24
CAPN8-208ENST00000482183 NLRP13Q86W25 1043 aa13.53□□□□□ -0.24
CAPN8-208ENST00000482183 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
CAPN8-208ENST00000482183 SCAPERQ9BY12 1400 aa13.53□□□□□ -0.24
CAPN8-208ENST00000482183 TRPM2O94759 1503 aa13.53□□□□□ -0.24
CAPN8-208ENST00000482183 PTPRTO14522 1441 aa13.52□□□□□ -0.25
CAPN8-208ENST00000482183 TET3O43151 1660 aa13.51□□□□□ -0.25
CAPN8-208ENST00000482183 DEPDC5O75140 1603 aa13.51□□□□□ -0.25
CAPN8-208ENST00000482183 ZFYVE16Q7Z3T8 1539 aa13.51□□□□□ -0.25
CAPN8-208ENST00000482183 A2MP01023 1474 aa13.51□□□□□ -0.25
CAPN8-208ENST00000482183 POLR3GLQ9BT43 218 aa13.51□□□□□ -0.25
CAPN8-208ENST00000482183 ERCC6L2Q5T890 1561 aa13.5□□□□□ -0.25
CAPN8-208ENST00000482183 ATP7AQ04656 1500 aa13.5□□□□□ -0.25
CAPN8-208ENST00000482183 PLA2R1Q13018 1463 aa13.5□□□□□ -0.25
CAPN8-208ENST00000482183 BCORL1Q5H9F3 1711 aa13.5□□□□□ -0.25
CAPN8-208ENST00000482183 ZNF518AQ6AHZ1 1483 aa13.49□□□□□ -0.25
CAPN8-208ENST00000482183 COL17A1Q9UMD9 1497 aaPredicted RBP13.49□□□□□ -0.25
CAPN8-208ENST00000482183 TRAPPC8Q9Y2L5 1435 aa13.49□□□□□ -0.25
CAPN8-208ENST00000482183 NUDCQ9Y266 331 aa13.49□□□□□ -0.25
CAPN8-208ENST00000482183 ADGRL1O94910 1474 aa13.48□□□□□ -0.25
CAPN8-208ENST00000482183 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
CAPN8-208ENST00000482183 INO80Q9ULG1 1556 aaPredicted RBP13.48□□□□□ -0.25
CAPN8-208ENST00000482183 KIAA1210Q9ULL0 1709 aa13.47□□□□□ -0.25
CAPN8-208ENST00000482183 E9PCH4 1651 aa13.47□□□□□ -0.25
CAPN8-208ENST00000482183 RGL3Q3MIN7 710 aa13.47□□□□□ -0.25
CAPN8-208ENST00000482183 LRPPRCP42704 1394 aaKnown RBP13.46□□□□□ -0.25
CAPN8-208ENST00000482183 PARD3Q8TEW0 1356 aa13.46□□□□□ -0.25
CAPN8-208ENST00000482183 VWDEQ8N2E2 1590 aa13.46□□□□□ -0.25
CAPN8-208ENST00000482183 LMTK2Q8IWU2 1503 aa13.46□□□□□ -0.25
CAPN8-208ENST00000482183 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
CAPN8-208ENST00000482183 SCAF11Q99590 1463 aaKnown RBP13.46□□□□□ -0.25
CAPN8-208ENST00000482183 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
CAPN8-208ENST00000482183 MYT1LQ9UL68 1186 aa13.45□□□□□ -0.26
CAPN8-208ENST00000482183 RIMBP3CA6NJZ7 1639 aa13.45□□□□□ -0.26
CAPN8-208ENST00000482183 RIMBP3BA6NNM3 1639 aa13.45□□□□□ -0.26
CAPN8-208ENST00000482183 RNF17Q9BXT8 1623 aaKnown RBP13.45□□□□□ -0.26
CAPN8-208ENST00000482183 RIMBP3Q9UFD9 1639 aa13.45□□□□□ -0.26
CAPN8-208ENST00000482183 ASXL2Q76L83 1435 aa13.45□□□□□ -0.26
CAPN8-208ENST00000482183 CEP152O94986 1710 aa13.44□□□□□ -0.26
CAPN8-208ENST00000482183 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
CAPN8-208ENST00000482183 CYB5RLQ6IPT4 315 aa13.44□□□□□ -0.26
CAPN8-208ENST00000482183 NPC1L1Q9UHC9 1359 aa13.44□□□□□ -0.26
CAPN8-208ENST00000482183 RPGRIP1LQ68CZ1 1315 aa13.43□□□□□ -0.26
CAPN8-208ENST00000482183 MYOM2P54296 1465 aa13.43□□□□□ -0.26
CAPN8-208ENST00000482183 KNSTRNQ9Y448 316 aa13.42□□□□□ -0.26
CAPN8-208ENST00000482183 MLH3Q9UHC1 1453 aa13.42□□□□□ -0.26
CAPN8-208ENST00000482183 AFAP1Q8N556 730 aa13.41□□□□□ -0.26
CAPN8-208ENST00000482183 BCANQ96GW7 911 aa13.41□□□□□ -0.26
CAPN8-208ENST00000482183 TESK2Q96S53 571 aa13.41□□□□□ -0.26
CAPN8-208ENST00000482183 NEO1Q92859 1461 aa13.41□□□□□ -0.26
CAPN8-208ENST00000482183 RNF123Q5XPI4 1314 aa13.4□□□□□ -0.26
CAPN8-208ENST00000482183 KIF3BO15066 747 aa13.4□□□□□ -0.26
CAPN8-208ENST00000482183 MADDQ8WXG6 1647 aa13.39□□□□□ -0.27
CAPN8-208ENST00000482183 PER1O15534 1290 aaPredicted RBP13.39□□□□□ -0.27
CAPN8-208ENST00000482183 SYNMO15061 1565 aa13.38□□□□□ -0.27
CAPN8-208ENST00000482183 SBNO2Q9Y2G9 1366 aa13.38□□□□□ -0.27
CAPN8-208ENST00000482183 CCDC184Q52MB2 194 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms