RNA–Protein interactions for RNA: ENST00000481238.1

TMED4-205, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 1 (best) BASIC

Gene TMED4, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-205ENST00000481238 KIDINS220Q9ULH0 1771 aa32.34■■■□□ 2.77
TMED4-205ENST00000481238 DIP2BQ9P265 1576 aa32.3■■■□□ 2.76
TMED4-205ENST00000481238 DEPDC5O75140 1603 aa32.27■■■□□ 2.76
TMED4-205ENST00000481238 EIF2AK4Q9P2K8 1649 aaKnown RBP32.27■■■□□ 2.76
TMED4-205ENST00000481238 KIF3BO15066 747 aa32.26■■■□□ 2.75
TMED4-205ENST00000481238 A2MP01023 1474 aa32.24■■■□□ 2.75
TMED4-205ENST00000481238 PLA2R1Q13018 1463 aa32.24■■■□□ 2.75
TMED4-205ENST00000481238 HECW2Q9P2P5 1572 aa32.24■■■□□ 2.75
TMED4-205ENST00000481238 RAPGEF3O95398 923 aa32.23■■■□□ 2.75
TMED4-205ENST00000481238 NBPF8Q3BBV2 869 aa32.23■■■□□ 2.75
TMED4-205ENST00000481238 ATP10AO60312 1499 aa32.23■■■□□ 2.75
TMED4-205ENST00000481238 KANK1Q14678 1352 aa32.22■■■□□ 2.75
TMED4-205ENST00000481238 CCDC144AA2RUR9 1427 aa32.21■■■□□ 2.75
TMED4-205ENST00000481238 VWDEQ8N2E2 1590 aa32.2■■■□□ 2.74
TMED4-205ENST00000481238 PRDM15P57071 1507 aaPredicted RBP32.15■■■□□ 2.74
TMED4-205ENST00000481238 HIRIP3Q9BW71 556 aaPredicted RBP32.14■■■□□ 2.74
TMED4-205ENST00000481238 RICTORQ6R327 1708 aa32.13■■■□□ 2.73
TMED4-205ENST00000481238 MROH1Q8NDA8 1641 aa32.13■■■□□ 2.73
TMED4-205ENST00000481238 UHRF1BP1Q6BDS2 1440 aa32.12■■■□□ 2.73
TMED4-205ENST00000481238 MIER1Q8N108 512 aa32.12■■■□□ 2.73
TMED4-205ENST00000481238 FRMPD1Q5SYB0 1578 aa32.11■■■□□ 2.73
TMED4-205ENST00000481238 EIF4G2P78344 907 aaKnown RBP eCLIP32.11■■■□□ 2.73
TMED4-205ENST00000481238 TET3O43151 1660 aa32.1■■■□□ 2.73
TMED4-205ENST00000481238 ABCA6Q8N139 1617 aa32.1■■■□□ 2.73
TMED4-205ENST00000481238 E9PCH4 1651 aa32.09■■■□□ 2.73
TMED4-205ENST00000481238 HSPA5P11021 654 aaKnown RBP32.08■■■□□ 2.73
TMED4-205ENST00000481238 PPRC1Q5VV67 1664 aaKnown RBP32.07■■■□□ 2.73
TMED4-205ENST00000481238 PTPRTO14522 1441 aa32.07■■■□□ 2.72
TMED4-205ENST00000481238 RNF17Q9BXT8 1623 aaKnown RBP32.07■■■□□ 2.72
TMED4-205ENST00000481238 DCAF11Q8TEB1 546 aa32.04■■■□□ 2.72
TMED4-205ENST00000481238 BCORL1Q5H9F3 1711 aa32.04■■■□□ 2.72
TMED4-205ENST00000481238 DIP2CQ9Y2E4 1556 aa32.03■■■□□ 2.72
TMED4-205ENST00000481238 LMTK2Q8IWU2 1503 aa32.03■■■□□ 2.72
TMED4-205ENST00000481238 TSPOAP1O95153 1857 aa32.01■■■□□ 2.71
TMED4-205ENST00000481238 TRPM2O94759 1503 aa32■■■□□ 2.71
TMED4-205ENST00000481238 ZMYM4Q5VZL5 1548 aa32■■■□□ 2.71
TMED4-205ENST00000481238 ZNF326Q5BKZ1 582 aaKnown RBP31.99■■■□□ 2.71
TMED4-205ENST00000481238 KDM2AQ9Y2K7 1162 aa31.99■■■□□ 2.71
TMED4-205ENST00000481238 DDX10Q13206 875 aaKnown RBP31.98■■■□□ 2.71
TMED4-205ENST00000481238 YEATS2Q9ULM3 1422 aa31.97■■■□□ 2.71
TMED4-205ENST00000481238 RGL3Q3MIN7 710 aa31.97■■■□□ 2.71
TMED4-205ENST00000481238 GGT6Q6P531 493 aa31.97■■■□□ 2.71
TMED4-205ENST00000481238 KIF13AQ9H1H9 1805 aa31.97■■■□□ 2.71
TMED4-205ENST00000481238 SPATA31E1Q6ZUB1 1445 aa31.96■■■□□ 2.71
TMED4-205ENST00000481238 SPHKAPQ2M3C7 1700 aa31.95■■■□□ 2.71
TMED4-205ENST00000481238 EFCAB6Q5THR3 1501 aa31.95■■■□□ 2.71
TMED4-205ENST00000481238 RALGAPBQ86X10 1494 aa31.95■■■□□ 2.7
TMED4-205ENST00000481238 PRAG1Q86YV5 1406 aa31.89■■■□□ 2.7
TMED4-205ENST00000481238 WASHC2CQ9Y4E1 1318 aa31.88■■■□□ 2.69
TMED4-205ENST00000481238 CEP152O94986 1710 aa31.87■■■□□ 2.69
TMED4-205ENST00000481238 CLTCL1P53675 1640 aa31.85■■■□□ 2.69
TMED4-205ENST00000481238 ABCC3O15438 1527 aa31.85■■■□□ 2.69
TMED4-205ENST00000481238 WASHC2AQ641Q2 1341 aa31.84■■■□□ 2.69
TMED4-205ENST00000481238 STAC3Q96MF2 364 aa31.84■■■□□ 2.69
TMED4-205ENST00000481238 USP47Q96K76 1375 aa31.83■■■□□ 2.69
TMED4-205ENST00000481238 CARD11Q9BXL7 1154 aa31.83■■■□□ 2.69
TMED4-205ENST00000481238 NPATQ14207 1427 aa31.81■■■□□ 2.68
TMED4-205ENST00000481238 NEURL4Q96JN8 1562 aa31.81■■■□□ 2.68
TMED4-205ENST00000481238 COL17A1Q9UMD9 1497 aaPredicted RBP31.8■■■□□ 2.68
TMED4-205ENST00000481238 REREQ9P2R6 1566 aa31.78■■■□□ 2.68
TMED4-205ENST00000481238 ROCK2O75116 1388 aaKnown RBP31.77■■■□□ 2.68
TMED4-205ENST00000481238 C11orf95C9JLR9 678 aaPredicted RBP31.77■■■□□ 2.68
TMED4-205ENST00000481238 TRPM1Q7Z4N2 1603 aa31.75■■■□□ 2.67
TMED4-205ENST00000481238 CCDC7Q96M83 1385 aa31.74■■■□□ 2.67
TMED4-205ENST00000481238 ARHGAP31Q2M1Z3 1444 aa31.74■■■□□ 2.67
TMED4-205ENST00000481238 CNTLNQ9NXG0 1405 aa31.74■■■□□ 2.67
TMED4-205ENST00000481238 GPRASP1Q5JY77 1395 aa31.73■■■□□ 2.67
TMED4-205ENST00000481238 AGLP35573 1532 aa31.73■■■□□ 2.67
TMED4-205ENST00000481238 CAMSAP1Q5T5Y3 1602 aa31.72■■■□□ 2.67
TMED4-205ENST00000481238 ZC3H13Q5T200 1668 aaKnown RBP31.72■■■□□ 2.67
TMED4-205ENST00000481238 UGGT1Q9NYU2 1555 aa31.7■■■□□ 2.67
TMED4-205ENST00000481238 NBPF1Q3BBV0 1214 aa31.69■■■□□ 2.66
TMED4-205ENST00000481238 PPP6R1Q9UPN7 881 aa31.69■■■□□ 2.66
TMED4-205ENST00000481238 NOS1P29475 1434 aa31.69■■■□□ 2.66
TMED4-205ENST00000481238 KIF7Q2M1P5 1343 aa31.66■■■□□ 2.66
TMED4-205ENST00000481238 KIF1BO60333 1816 aa31.65■■■□□ 2.66
TMED4-205ENST00000481238 ARID4BQ4LE39 1312 aaPredicted RBP31.65■■■□□ 2.66
TMED4-205ENST00000481238 LAMC1P11047 1609 aa31.65■■■□□ 2.66
TMED4-205ENST00000481238 ANP32CO43423 234 aa31.63■■■□□ 2.65
TMED4-205ENST00000481238 ST20-MTHFSA0A0A6YYL1 179 aa31.63■■■□□ 2.65
TMED4-205ENST00000481238 MADDQ8WXG6 1647 aa31.62■■■□□ 2.65
TMED4-205ENST00000481238 ARHGEF40Q8TER5 1519 aa31.62■■■□□ 2.65
TMED4-205ENST00000481238 POLR1AO95602 1720 aaPredicted RBP31.61■■■□□ 2.65
TMED4-205ENST00000481238 ADGRB3O60242 1522 aa31.59■■■□□ 2.65
TMED4-205ENST00000481238 MYOM2P54296 1465 aa31.58■■■□□ 2.65
TMED4-205ENST00000481238 SIGLEC1Q9BZZ2 1709 aa31.58■■■□□ 2.65
TMED4-205ENST00000481238 CFAP65Q6ZU64 1925 aaKnown RBP31.57■■■□□ 2.64
TMED4-205ENST00000481238 CHGAP10645 457 aaKnown RBP31.54■■■□□ 2.64
TMED4-205ENST00000481238 SYNMO15061 1565 aa31.53■■■□□ 2.64
TMED4-205ENST00000481238 SLC52A1Q9NWF4 448 aa31.53■■■□□ 2.64
TMED4-205ENST00000481238 RPGRIP1LQ68CZ1 1315 aa31.53■■■□□ 2.64
TMED4-205ENST00000481238 MROH2AA6NES4 1674 aa31.53■■■□□ 2.64
TMED4-205ENST00000481238 PIK3C2BO00750 1634 aa31.52■■■□□ 2.64
TMED4-205ENST00000481238 CCER2I3L3R5 266 aa31.51■■■□□ 2.64
TMED4-205ENST00000481238 CENPBP07199 599 aaPredicted RBP31.51■■■□□ 2.64
TMED4-205ENST00000481238 YTHDC1Q96MU7 727 aaKnown RBP31.51■■■□□ 2.63
TMED4-205ENST00000481238 ADGRF5Q8IZF2 1346 aa31.5■■■□□ 2.63
TMED4-205ENST00000481238 DNAJC5Q9H3Z4 198 aa31.5■■■□□ 2.63
TMED4-205ENST00000481238 IFT172Q9UG01 1749 aa31.49■■■□□ 2.63
TMED4-205ENST00000481238 NRXN1Q9ULB1 1477 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms