RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 ARHGAP33O14559 1287 aa13.88□□□□□ -0.19
GTF3C3-211ENST00000481098 RBM26Q5T8P6 1007 aaKnown RBP13.88□□□□□ -0.19
GTF3C3-211ENST00000481098 RBM33Q96EV2 1170 aaKnown RBP13.88□□□□□ -0.19
GTF3C3-211ENST00000481098 TSR1Q2NL82 804 aaKnown RBP13.87□□□□□ -0.19
GTF3C3-211ENST00000481098 KCNH8Q96L42 1107 aa13.85□□□□□ -0.19
GTF3C3-211ENST00000481098 KCNK17Q96T54 332 aa13.85□□□□□ -0.19
GTF3C3-211ENST00000481098 PPP1R3GB7ZBB8 358 aa13.84□□□□□ -0.19
GTF3C3-211ENST00000481098 LMOD2Q6P5Q4 547 aa13.84□□□□□ -0.19
GTF3C3-211ENST00000481098 CERKQ8TCT0 537 aa13.83□□□□□ -0.2
GTF3C3-211ENST00000481098 CDAN1Q8IWY9 1227 aa13.82□□□□□ -0.2
GTF3C3-211ENST00000481098 CDHR5Q9HBB8 845 aa13.82□□□□□ -0.2
GTF3C3-211ENST00000481098 PCDH10Q9P2E7 1040 aa13.82□□□□□ -0.2
GTF3C3-211ENST00000481098 KRTAP3-3Q9BYR6 98 aa13.81□□□□□ -0.2
GTF3C3-211ENST00000481098 KRTAP3-2Q9BYR7 98 aa13.81□□□□□ -0.2
GTF3C3-211ENST00000481098 NPDC1Q9NQX5 325 aaPredicted RBP13.81□□□□□ -0.2
GTF3C3-211ENST00000481098 COL9A1P20849 921 aa13.8□□□□□ -0.2
GTF3C3-211ENST00000481098 PSEN2P49810 448 aa13.8□□□□□ -0.2
GTF3C3-211ENST00000481098 PTGDRQ13258 359 aa13.8□□□□□ -0.2
GTF3C3-211ENST00000481098 SLC4A5Q9BY07 1137 aa13.8□□□□□ -0.2
GTF3C3-211ENST00000481098 AXIN2Q9Y2T1 843 aa13.8□□□□□ -0.2
GTF3C3-211ENST00000481098 GPR37O15354 613 aa13.79□□□□□ -0.2
GTF3C3-211ENST00000481098 NUTM2FA1L443 756 aa13.78□□□□□ -0.2
GTF3C3-211ENST00000481098 LSM11P83369 360 aaKnown RBP eCLIP13.77□□□□□ -0.21
GTF3C3-211ENST00000481098 DMRTA1Q5VZB9 504 aa13.77□□□□□ -0.21
GTF3C3-211ENST00000481098 GPIHBP1Q8IV16 184 aa13.77□□□□□ -0.21
GTF3C3-211ENST00000481098 FCHSD2O94868 740 aa13.76□□□□□ -0.21
GTF3C3-211ENST00000481098 ZBED2Q9BTP6 218 aa13.76□□□□□ -0.21
GTF3C3-211ENST00000481098 RBM27Q9P2N5 1060 aaKnown RBP13.76□□□□□ -0.21
GTF3C3-211ENST00000481098 TK2O00142 265 aa13.75□□□□□ -0.21
GTF3C3-211ENST00000481098 ONECUT3O60422 494 aaPredicted RBP13.72□□□□□ -0.21
GTF3C3-211ENST00000481098 PRSS12P56730 875 aa13.72□□□□□ -0.21
GTF3C3-211ENST00000481098 HIC1Q14526 733 aa13.72□□□□□ -0.21
GTF3C3-211ENST00000481098 TTC13Q8NBP0 860 aa13.72□□□□□ -0.21
GTF3C3-211ENST00000481098 VPS9D1Q9Y2B5 631 aa13.71□□□□□ -0.21
GTF3C3-211ENST00000481098 CDCA7LQ96GN5 454 aa13.7□□□□□ -0.22
GTF3C3-211ENST00000481098 TRIM6-TRIM34B2RNG4 842 aa13.68□□□□□ -0.22
GTF3C3-211ENST00000481098 GNPATO15228 680 aa13.68□□□□□ -0.22
GTF3C3-211ENST00000481098 ADGRD1Q6QNK2 874 aa13.68□□□□□ -0.22
GTF3C3-211ENST00000481098 ZC3H15Q8WU90 426 aaKnown RBP13.68□□□□□ -0.22
GTF3C3-211ENST00000481098 PROX2Q3B8N5 592 aa13.67□□□□□ -0.22
GTF3C3-211ENST00000481098 RABGEF1Q9UJ41 708 aa13.65□□□□□ -0.22
GTF3C3-211ENST00000481098 TSKSQ9UJT2 592 aa13.65□□□□□ -0.22
GTF3C3-211ENST00000481098 HRO43593 1189 aa13.64□□□□□ -0.23
GTF3C3-211ENST00000481098 PADI6Q6TGC4 694 aa13.64□□□□□ -0.23
GTF3C3-211ENST00000481098 ANKRD13DQ6ZTN6 518 aa13.64□□□□□ -0.23
GTF3C3-211ENST00000481098 ZMYND10O75800 440 aa13.63□□□□□ -0.23
GTF3C3-211ENST00000481098 FAM198AQ9UFP1 575 aa13.63□□□□□ -0.23
GTF3C3-211ENST00000481098 BHMG1C9JSJ3 638 aaPredicted RBP13.62□□□□□ -0.23
GTF3C3-211ENST00000481098 PACS2Q86VP3 889 aa13.61□□□□□ -0.23
GTF3C3-211ENST00000481098 KIAA1468Q9P260 1216 aa13.6□□□□□ -0.23
GTF3C3-211ENST00000481098 FECHP22830 423 aa13.59□□□□□ -0.23
GTF3C3-211ENST00000481098 BARGINQ6ZT62 677 aa13.59□□□□□ -0.23
GTF3C3-211ENST00000481098 MAP2K5Q13163 448 aa13.57□□□□□ -0.24
GTF3C3-211ENST00000481098 NBPF3Q9H094 633 aa13.57□□□□□ -0.24
GTF3C3-211ENST00000481098 ADGRG1Q9Y653 693 aa13.57□□□□□ -0.24
GTF3C3-211ENST00000481098 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
GTF3C3-211ENST00000481098 LAPTM4BQ86VI4 370 aa13.55□□□□□ -0.24
GTF3C3-211ENST00000481098 TATDN2Q93075 761 aa13.54□□□□□ -0.24
GTF3C3-211ENST00000481098 MINK1Q8N4C8 1332 aaPredicted RBP13.54□□□□□ -0.24
GTF3C3-211ENST00000481098 C3orf80F5H4A9 247 aa13.53□□□□□ -0.24
GTF3C3-211ENST00000481098 EYA1Q99502 592 aa13.52□□□□□ -0.25
GTF3C3-211ENST00000481098 IRF6O14896 467 aa13.51□□□□□ -0.25
GTF3C3-211ENST00000481098 OATP04181 439 aa13.51□□□□□ -0.25
GTF3C3-211ENST00000481098 NUDT18Q6ZVK8 323 aa13.5□□□□□ -0.25
GTF3C3-211ENST00000481098 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
GTF3C3-211ENST00000481098 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
GTF3C3-211ENST00000481098 RBM46Q8TBY0 533 aaKnown RBP13.49□□□□□ -0.25
GTF3C3-211ENST00000481098 PNMA3Q9UL41 463 aa13.49□□□□□ -0.25
GTF3C3-211ENST00000481098 METTL3Q86U44 580 aaKnown RBP13.48□□□□□ -0.25
GTF3C3-211ENST00000481098 SPNS2Q8IVW8 549 aa13.48□□□□□ -0.25
GTF3C3-211ENST00000481098 PXYLP1Q8TE99 480 aa13.47□□□□□ -0.25
GTF3C3-211ENST00000481098 SEPT9Q9UHD8 586 aaPredicted RBP13.47□□□□□ -0.25
GTF3C3-211ENST00000481098 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
GTF3C3-211ENST00000481098 CCDC102AQ96A19 550 aa13.46□□□□□ -0.25
GTF3C3-211ENST00000481098 SMAPO00193 183 aa13.45□□□□□ -0.26
GTF3C3-211ENST00000481098 TPRNQ4KMQ1 711 aa13.45□□□□□ -0.26
GTF3C3-211ENST00000481098 STAC3Q96MF2 364 aa13.44□□□□□ -0.26
GTF3C3-211ENST00000481098 KRI1Q8N9T8 703 aaKnown RBP13.43□□□□□ -0.26
GTF3C3-211ENST00000481098 ZFRQ96KR1 1074 aaKnown RBP13.42□□□□□ -0.26
GTF3C3-211ENST00000481098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.41□□□□□ -0.26
GTF3C3-211ENST00000481098 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
GTF3C3-211ENST00000481098 DNAJB2P25686 324 aa13.4□□□□□ -0.26
GTF3C3-211ENST00000481098 AK7Q96M32 723 aa13.4□□□□□ -0.26
GTF3C3-211ENST00000481098 PHOX2BQ99453 314 aa13.4□□□□□ -0.26
GTF3C3-211ENST00000481098 RCCD1A6NED2 376 aa13.39□□□□□ -0.27
GTF3C3-211ENST00000481098 TMEM134Q9H6X4 195 aa13.39□□□□□ -0.27
GTF3C3-211ENST00000481098 SLC24A3Q9HC58 644 aa13.39□□□□□ -0.27
GTF3C3-211ENST00000481098 GOLGA8CPA6NN73 597 aa13.36□□□□□ -0.27
GTF3C3-211ENST00000481098 AMHR2Q16671 573 aa13.36□□□□□ -0.27
GTF3C3-211ENST00000481098 ANKK1Q8NFD2 765 aa13.36□□□□□ -0.27
GTF3C3-211ENST00000481098 WNT2BQ93097 391 aa13.35□□□□□ -0.27
GTF3C3-211ENST00000481098 TRIM66O15016 1216 aa13.34□□□□□ -0.27
GTF3C3-211ENST00000481098 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
GTF3C3-211ENST00000481098 SAMD7Q7Z3H4 446 aa13.33□□□□□ -0.28
GTF3C3-211ENST00000481098 SOWAHBA6NEL2 793 aa13.32□□□□□ -0.28
GTF3C3-211ENST00000481098 SWT1Q5T5J6 900 aaKnown RBP13.31□□□□□ -0.28
GTF3C3-211ENST00000481098 THSD4Q6ZMP0 1018 aa13.31□□□□□ -0.28
GTF3C3-211ENST00000481098 RNF166Q96A37 237 aaPredicted RBP13.31□□□□□ -0.28
GTF3C3-211ENST00000481098 LRCH3Q96II8 777 aa13.31□□□□□ -0.28
GTF3C3-211ENST00000481098 HDGFP51858 240 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms