RNA–Protein interactions for RNA: ENST00000480686.5

RNF220-213, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-213ENST00000480686 USP47Q96K76 1375 aa15.99■□□□□ 0.15
RNF220-213ENST00000480686 CBX1P83916 185 aa15.98■□□□□ 0.15
RNF220-213ENST00000480686 EIF4G1Q04637 1599 aaKnown RBP15.98■□□□□ 0.15
RNF220-213ENST00000480686 CHMP4BQ9H444 224 aaKnown RBP15.98■□□□□ 0.15
RNF220-213ENST00000480686 RGL3Q3MIN7 710 aa15.97■□□□□ 0.15
RNF220-213ENST00000480686 CCDC146Q8IYE0 955 aa15.97■□□□□ 0.15
RNF220-213ENST00000480686 LRRC9Q6ZRR7 1453 aa15.97■□□□□ 0.15
RNF220-213ENST00000480686 C22orf23Q9BZE7 217 aa15.97■□□□□ 0.15
RNF220-213ENST00000480686 SEC24BO95487 1268 aa15.96■□□□□ 0.15
RNF220-213ENST00000480686 KIAA2012Q0VF49 1180 aa15.96■□□□□ 0.15
RNF220-213ENST00000480686 PLCD3Q8N3E9 789 aa15.96■□□□□ 0.15
RNF220-213ENST00000480686 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.15
RNF220-213ENST00000480686 NCOA1Q15788 1441 aa15.96■□□□□ 0.15
RNF220-213ENST00000480686 CSPP1Q1MSJ5 1256 aa15.95■□□□□ 0.14
RNF220-213ENST00000480686 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
RNF220-213ENST00000480686 FTSJ3Q8IY81 847 aaKnown RBP15.95■□□□□ 0.14
RNF220-213ENST00000480686 KNSTRNQ9Y448 316 aa15.95■□□□□ 0.14
RNF220-213ENST00000480686 PTMSP20962 102 aa15.95■□□□□ 0.14
RNF220-213ENST00000480686 CHAF1AQ13111 956 aaPredicted RBP15.94■□□□□ 0.14
RNF220-213ENST00000480686 NAP1L2Q9ULW6 460 aaPredicted RBP15.94■□□□□ 0.14
RNF220-213ENST00000480686 ROCK2O75116 1388 aaKnown RBP15.93■□□□□ 0.14
RNF220-213ENST00000480686 MPNDQ8N594 471 aa15.93■□□□□ 0.14
RNF220-213ENST00000480686 PMFBP1Q8TBY8 1022 aa15.93■□□□□ 0.14
RNF220-213ENST00000480686 PANK1Q8TE04 598 aa15.92■□□□□ 0.14
RNF220-213ENST00000480686 RWDD1Q9H446 243 aaPredicted RBP15.92■□□□□ 0.14
RNF220-213ENST00000480686 VGLL3A8MV65 326 aa15.91■□□□□ 0.14
RNF220-213ENST00000480686 OFD1O75665 1012 aa15.91■□□□□ 0.14
RNF220-213ENST00000480686 SMAP1Q8IYB5 467 aaPredicted RBP15.91■□□□□ 0.14
RNF220-213ENST00000480686 BCAR3O75815 825 aa15.91■□□□□ 0.14
RNF220-213ENST00000480686 BCL2L13Q9BXK5 485 aa15.91■□□□□ 0.14
RNF220-213ENST00000480686 ERBB4Q15303 1308 aa15.91■□□□□ 0.14
RNF220-213ENST00000480686 RNF214Q8ND24 703 aa15.9■□□□□ 0.14
RNF220-213ENST00000480686 CGNQ9P2M7 1197 aaKnown RBP15.9■□□□□ 0.14
RNF220-213ENST00000480686 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
RNF220-213ENST00000480686 CGNL1Q0VF96 1302 aa15.89■□□□□ 0.13
RNF220-213ENST00000480686 ADAMTS8Q9UP79 889 aa15.89■□□□□ 0.13
RNF220-213ENST00000480686 CAVIN1Q6NZI2 390 aaKnown RBP15.89■□□□□ 0.13
RNF220-213ENST00000480686 IGSF3O75054 1194 aa15.89■□□□□ 0.13
RNF220-213ENST00000480686 MAP3K1Q13233 1512 aa15.89■□□□□ 0.13
RNF220-213ENST00000480686 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
RNF220-213ENST00000480686 FSD2A1L4K1 749 aa15.87■□□□□ 0.13
RNF220-213ENST00000480686 FOXD4L5Q5VV16 416 aaPredicted RBP15.87■□□□□ 0.13
RNF220-213ENST00000480686 FOXD4L4Q8WXT5 416 aaPredicted RBP15.87■□□□□ 0.13
RNF220-213ENST00000480686 TNNT3P45378 269 aaPredicted RBP15.87■□□□□ 0.13
RNF220-213ENST00000480686 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
RNF220-213ENST00000480686 FHOD3Q2V2M9 1422 aa15.86■□□□□ 0.13
RNF220-213ENST00000480686 PKD2Q13563 968 aa15.86■□□□□ 0.13
RNF220-213ENST00000480686 FGD6Q6ZV73 1430 aa15.86■□□□□ 0.13
RNF220-213ENST00000480686 MCTP1Q6DN14 999 aa15.86■□□□□ 0.13
RNF220-213ENST00000480686 IGHDP01880 384 aa15.85■□□□□ 0.13
RNF220-213ENST00000480686 PDZRN3Q9UPQ7 1066 aa15.85■□□□□ 0.13
RNF220-213ENST00000480686 ERICH3Q5RHP9 1530 aa15.84■□□□□ 0.13
RNF220-213ENST00000480686 APAF1O14727 1248 aa15.84■□□□□ 0.13
RNF220-213ENST00000480686 DYNC1I1O14576 645 aa15.84■□□□□ 0.13
RNF220-213ENST00000480686 SPDYE4A6NLX3 237 aa15.84■□□□□ 0.13
RNF220-213ENST00000480686 PANK3Q9H999 370 aa15.84■□□□□ 0.13
RNF220-213ENST00000480686 TNPO1Q92973 898 aaKnown RBP15.83■□□□□ 0.13
RNF220-213ENST00000480686 PPP4R3BQ5MIZ7 849 aa15.83■□□□□ 0.12
RNF220-213ENST00000480686 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
RNF220-213ENST00000480686 KDM2BQ8NHM5 1336 aa15.82■□□□□ 0.12
RNF220-213ENST00000480686 NCAPD3P42695 1498 aa15.82■□□□□ 0.12
RNF220-213ENST00000480686 NCOA2Q15596 1464 aa15.82■□□□□ 0.12
RNF220-213ENST00000480686 SASS6Q6UVJ0 657 aa15.81■□□□□ 0.12
RNF220-213ENST00000480686 HFM1A2PYH4 1435 aa15.81■□□□□ 0.12
RNF220-213ENST00000480686 PAXIP1Q6ZW49 1069 aaPredicted RBP15.81■□□□□ 0.12
RNF220-213ENST00000480686 PRDM4Q9UKN5 801 aa15.81■□□□□ 0.12
RNF220-213ENST00000480686 GAS2L3Q86XJ1 694 aa15.8■□□□□ 0.12
RNF220-213ENST00000480686 E9PSI1 815 aa15.8■□□□□ 0.12
RNF220-213ENST00000480686 CHMP4AQ9BY43 222 aa15.8■□□□□ 0.12
RNF220-213ENST00000480686 CCDC39Q9UFE4 941 aa15.8■□□□□ 0.12
RNF220-213ENST00000480686 PRXQ9BXM0 1461 aa15.8■□□□□ 0.12
RNF220-213ENST00000480686 CCDC94Q9BW85 323 aaPredicted RBP15.79■□□□□ 0.12
RNF220-213ENST00000480686 TIAM1Q13009 1591 aa15.79■□□□□ 0.12
RNF220-213ENST00000480686 RIPK4P57078 832 aa15.79■□□□□ 0.12
RNF220-213ENST00000480686 FOXD4L6Q3SYB3 417 aaPredicted RBP15.79■□□□□ 0.12
RNF220-213ENST00000480686 FOXD4L3Q6VB84 417 aaPredicted RBP15.79■□□□□ 0.12
RNF220-213ENST00000480686 NAIPQ13075 1403 aa15.78■□□□□ 0.12
RNF220-213ENST00000480686 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
RNF220-213ENST00000480686 FAM177BA6PVY3 158 aa15.77■□□□□ 0.11
RNF220-213ENST00000480686 AEBP1Q8IUX7 1158 aa15.77■□□□□ 0.11
RNF220-213ENST00000480686 TMF1P82094 1093 aa15.76■□□□□ 0.11
RNF220-213ENST00000480686 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
RNF220-213ENST00000480686 HMGN5P82970 282 aaKnown RBP15.76■□□□□ 0.11
RNF220-213ENST00000480686 TSC1Q92574 1164 aa15.75■□□□□ 0.11
RNF220-213ENST00000480686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.111e-8■□□□□ 11.1
RNF220-213ENST00000480686 RRP7AQ9Y3A4 280 aaKnown RBP15.75■□□□□ 0.11
RNF220-213ENST00000480686 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.112e-8■■■■■ 35.6
RNF220-213ENST00000480686 PDCL2Q8N4E4 241 aa15.75■□□□□ 0.11
RNF220-213ENST00000480686 ANTXR1Q9H6X2 564 aa15.75■□□□□ 0.11
RNF220-213ENST00000480686 DHX29Q7Z478 1369 aaKnown RBP15.75■□□□□ 0.11
RNF220-213ENST00000480686 PRPF40AO75400 957 aaKnown RBP15.75■□□□□ 0.11
RNF220-213ENST00000480686 DUSP27Q5VZP5 1158 aa15.74■□□□□ 0.11
RNF220-213ENST00000480686 KIF3AQ9Y496 699 aa15.74■□□□□ 0.11
RNF220-213ENST00000480686 LETM1O95202 739 aaPredicted RBP15.73■□□□□ 0.11
RNF220-213ENST00000480686 SSFA2P28290 1259 aa15.73■□□□□ 0.11
RNF220-213ENST00000480686 KCNJ4P48050 445 aa15.73■□□□□ 0.11
RNF220-213ENST00000480686 TAF7LQ5H9L4 462 aa15.72■□□□□ 0.11
RNF220-213ENST00000480686 TRERF1Q96PN7 1200 aa15.72■□□□□ 0.11
RNF220-213ENST00000480686 DMTNQ08495 405 aa15.71■□□□□ 0.11
RNF220-213ENST00000480686 GTPBP4Q9BZE4 634 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms