RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 CCDC141Q6ZP82 1450 aa18.71■□□□□ 0.59
TRA2B-212ENST00000480461 UBAP1LF5GYI3 381 aa18.71■□□□□ 0.59
TRA2B-212ENST00000480461 TSPY4P0CV99 314 aa18.71■□□□□ 0.59
TRA2B-212ENST00000480461 TSPY10P0CW01 314 aa18.71■□□□□ 0.59
TRA2B-212ENST00000480461 NCKAP5LQ9HCH0 1330 aa18.71■□□□□ 0.59
TRA2B-212ENST00000480461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.7■□□□□ 0.585e-7■□□□□ 8.4
TRA2B-212ENST00000480461 DAPK1P53355 1430 aa18.69■□□□□ 0.58
TRA2B-212ENST00000480461 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
TRA2B-212ENST00000480461 ZMYM3Q14202 1370 aa18.68■□□□□ 0.58
TRA2B-212ENST00000480461 CEP170BQ9Y4F5 1589 aaPredicted RBP18.68■□□□□ 0.58
TRA2B-212ENST00000480461 ITGAEP38570 1179 aa18.68■□□□□ 0.58
TRA2B-212ENST00000480461 CLTCQ00610 1675 aaKnown RBP18.67■□□□□ 0.58
TRA2B-212ENST00000480461 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
TRA2B-212ENST00000480461 PLXNC1O60486 1568 aa18.66■□□□□ 0.58
TRA2B-212ENST00000480461 MED1Q15648 1581 aaPredicted RBP18.66■□□□□ 0.58
TRA2B-212ENST00000480461 DNMT1P26358 1616 aaKnown RBP18.64■□□□□ 0.57
TRA2B-212ENST00000480461 PKD2Q13563 968 aa18.64■□□□□ 0.57
TRA2B-212ENST00000480461 ATP7AQ04656 1500 aa18.64■□□□□ 0.57
TRA2B-212ENST00000480461 INO80Q9ULG1 1556 aaPredicted RBP18.64■□□□□ 0.57
TRA2B-212ENST00000480461 RRP7BPQ9NSQ0 103 aa18.63■□□□□ 0.57
TRA2B-212ENST00000480461 MAST1Q9Y2H9 1570 aa18.6■□□□□ 0.57
TRA2B-212ENST00000480461 SHANK2Q9UPX8 1470 aa18.59■□□□□ 0.57
TRA2B-212ENST00000480461 PPP6R1Q9UPN7 881 aa18.59■□□□□ 0.57
TRA2B-212ENST00000480461 DHX29Q7Z478 1369 aaKnown RBP18.58■□□□□ 0.57
TRA2B-212ENST00000480461 A2MP01023 1474 aa18.58■□□□□ 0.56
TRA2B-212ENST00000480461 HSPA1LP34931 641 aa18.56■□□□□ 0.56
TRA2B-212ENST00000480461 CROCC2H7BZ55 1655 aa18.56■□□□□ 0.56
TRA2B-212ENST00000480461 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
TRA2B-212ENST00000480461 A2ML1A8K2U0 1454 aa18.55■□□□□ 0.56
TRA2B-212ENST00000480461 ADGRL2O95490 1459 aa18.55■□□□□ 0.56
TRA2B-212ENST00000480461 NEURL4Q96JN8 1562 aa18.55■□□□□ 0.56
TRA2B-212ENST00000480461 KIF15Q9NS87 1388 aa18.55■□□□□ 0.56
TRA2B-212ENST00000480461 CPS1P31327 1500 aa18.54■□□□□ 0.56
TRA2B-212ENST00000480461 POLR1AO95602 1720 aaPredicted RBP18.54■□□□□ 0.56
TRA2B-212ENST00000480461 ROCK1Q13464 1354 aa18.53■□□□□ 0.56
TRA2B-212ENST00000480461 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
TRA2B-212ENST00000480461 PIP4K2BP78356 416 aa18.52■□□□□ 0.56
TRA2B-212ENST00000480461 KIF3BO15066 747 aa18.51■□□□□ 0.55
TRA2B-212ENST00000480461 ADGBQ8N7X0 1667 aa18.5■□□□□ 0.55
TRA2B-212ENST00000480461 GGT6Q6P531 493 aa18.5■□□□□ 0.55
TRA2B-212ENST00000480461 ALKQ9UM73 1620 aa18.49■□□□□ 0.55
TRA2B-212ENST00000480461 TOM1O60784 492 aa18.48■□□□□ 0.55
TRA2B-212ENST00000480461 DUOX2Q9NRD8 1548 aa18.48■□□□□ 0.55
TRA2B-212ENST00000480461 VWDEQ8N2E2 1590 aa18.47■□□□□ 0.55
TRA2B-212ENST00000480461 NAIPQ13075 1403 aa18.46■□□□□ 0.55
TRA2B-212ENST00000480461 ANKRD50Q9ULJ7 1429 aa18.44■□□□□ 0.54
TRA2B-212ENST00000480461 TRIM26Q12899 539 aaPredicted RBP18.43■□□□□ 0.54
TRA2B-212ENST00000480461 TNRQ92752 1358 aa18.42■□□□□ 0.54
TRA2B-212ENST00000480461 ERBINQ96RT1 1412 aa18.42■□□□□ 0.54
TRA2B-212ENST00000480461 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
TRA2B-212ENST00000480461 HFM1A2PYH4 1435 aa18.41■□□□□ 0.54
TRA2B-212ENST00000480461 PZPP20742 1482 aa18.41■□□□□ 0.54
TRA2B-212ENST00000480461 KDM5DQ9BY66 1539 aa18.41■□□□□ 0.54
TRA2B-212ENST00000480461 FAM135AQ9P2D6 1515 aa18.4■□□□□ 0.54
TRA2B-212ENST00000480461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.548e-8■■□□□ 12.1
TRA2B-212ENST00000480461 DEPDC5O75140 1603 aa18.39■□□□□ 0.53
TRA2B-212ENST00000480461 FBXO31Q5XUX0 539 aaPredicted RBP18.39■□□□□ 0.53
TRA2B-212ENST00000480461 MED14O60244 1454 aa18.39■□□□□ 0.53
TRA2B-212ENST00000480461 NPHP4O75161 1426 aaPredicted RBP18.36■□□□□ 0.53
TRA2B-212ENST00000480461 MROH1Q8NDA8 1641 aa18.36■□□□□ 0.53
TRA2B-212ENST00000480461 RNF17Q9BXT8 1623 aaKnown RBP18.36■□□□□ 0.53
TRA2B-212ENST00000480461 NLRP1Q9C000 1473 aa18.36■□□□□ 0.53
TRA2B-212ENST00000480461 IQGAP1P46940 1657 aa18.35■□□□□ 0.53
TRA2B-212ENST00000480461 SYNMO15061 1565 aa18.35■□□□□ 0.53
TRA2B-212ENST00000480461 UGGT1Q9NYU2 1555 aa18.35■□□□□ 0.53
TRA2B-212ENST00000480461 WASHC2CQ9Y4E1 1318 aa18.35■□□□□ 0.53
TRA2B-212ENST00000480461 ANKLE2Q86XL3 938 aa18.35■□□□□ 0.53
TRA2B-212ENST00000480461 STRCP1A6NGW2 1772 aa18.35■□□□□ 0.53
TRA2B-212ENST00000480461 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
TRA2B-212ENST00000480461 SETD5Q9C0A6 1442 aa18.34■□□□□ 0.53
TRA2B-212ENST00000480461 SENP3Q9H4L4 574 aaPredicted RBP18.34■□□□□ 0.53
TRA2B-212ENST00000480461 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.52
TRA2B-212ENST00000480461 THEMISQ8N1K5 641 aaPredicted RBP18.31■□□□□ 0.52
TRA2B-212ENST00000480461 NUP155O75694 1391 aa18.3■□□□□ 0.52
TRA2B-212ENST00000480461 RAB3GAP2Q9H2M9 1393 aa18.3■□□□□ 0.52
TRA2B-212ENST00000480461 GCC2Q8IWJ2 1684 aa18.29■□□□□ 0.52
TRA2B-212ENST00000480461 PRDM15P57071 1507 aaPredicted RBP18.28■□□□□ 0.52
TRA2B-212ENST00000480461 ABCC3O15438 1527 aa18.28■□□□□ 0.52
TRA2B-212ENST00000480461 TRIM52Q96A61 297 aa18.27■□□□□ 0.52
TRA2B-212ENST00000480461 ZC3H13Q5T200 1668 aaKnown RBP18.26■□□□□ 0.51
TRA2B-212ENST00000480461 PCGF6Q9BYE7 350 aa18.26■□□□□ 0.51
TRA2B-212ENST00000480461 RGS17Q9UGC6 210 aaPredicted RBP18.26■□□□□ 0.51
TRA2B-212ENST00000480461 UNC13BO14795 1591 aa18.25■□□□□ 0.51
TRA2B-212ENST00000480461 HRCP23327 699 aa18.25■□□□□ 0.51
TRA2B-212ENST00000480461 KANK1Q14678 1352 aa18.25■□□□□ 0.51
TRA2B-212ENST00000480461 LMTK2Q8IWU2 1503 aa18.23■□□□□ 0.51
TRA2B-212ENST00000480461 CEP152O94986 1710 aa18.2■□□□□ 0.5
TRA2B-212ENST00000480461 ERVK-7P63135 1459 aa18.2■□□□□ 0.5
TRA2B-212ENST00000480461 MPHOSPH9Q99550 1183 aa18.2■□□□□ 0.5
TRA2B-212ENST00000480461 ARHGAP31Q2M1Z3 1444 aa18.2■□□□□ 0.5
TRA2B-212ENST00000480461 XIRP1Q702N8 1843 aaKnown RBP18.19■□□□□ 0.5
TRA2B-212ENST00000480461 UBR1Q8IWV7 1749 aa18.19■□□□□ 0.5
TRA2B-212ENST00000480461 FOXD1Q16676 465 aa18.18■□□□□ 0.5
TRA2B-212ENST00000480461 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
TRA2B-212ENST00000480461 IQGAP3Q86VI3 1631 aa18.18■□□□□ 0.5
TRA2B-212ENST00000480461 SCAF11Q99590 1463 aaKnown RBP18.17■□□□□ 0.5
TRA2B-212ENST00000480461 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.5
TRA2B-212ENST00000480461 EFCAB6Q5THR3 1501 aa18.14■□□□□ 0.49
TRA2B-212ENST00000480461 SLIT1O75093 1534 aa18.13■□□□□ 0.49
TRA2B-212ENST00000480461 TET3O43151 1660 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms