RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 DEPDC5O75140 1603 aa39.57■■■■□ 3.93
TNFRSF25-213ENST00000480393 DIP2BQ9P265 1576 aa39.57■■■■□ 3.93
TNFRSF25-213ENST00000480393 HECW2Q9P2P5 1572 aa39.56■■■■□ 3.92
TNFRSF25-213ENST00000480393 MLH3Q9UHC1 1453 aa39.54■■■■□ 3.92
TNFRSF25-213ENST00000480393 FAM69CQ0P6D2 419 aa39.51■■■■□ 3.91
TNFRSF25-213ENST00000480393 KANK1Q14678 1352 aa39.5■■■■□ 3.91
TNFRSF25-213ENST00000480393 CCDC144AA2RUR9 1427 aa39.49■■■■□ 3.91
TNFRSF25-213ENST00000480393 KIF3BO15066 747 aa39.47■■■■□ 3.91
TNFRSF25-213ENST00000480393 A2MP01023 1474 aa39.47■■■■□ 3.91
TNFRSF25-213ENST00000480393 PRDM15P57071 1507 aaPredicted RBP39.43■■■■□ 3.9
TNFRSF25-213ENST00000480393 NBPF8Q3BBV2 869 aa39.43■■■■□ 3.9
TNFRSF25-213ENST00000480393 HIRIP3Q9BW71 556 aaPredicted RBP39.43■■■■□ 3.9
TNFRSF25-213ENST00000480393 PLA2R1Q13018 1463 aa39.41■■■■□ 3.9
TNFRSF25-213ENST00000480393 VWDEQ8N2E2 1590 aa39.41■■■■□ 3.9
TNFRSF25-213ENST00000480393 DNAJC5Q9H3Z4 198 aa39.4■■■■□ 3.9
TNFRSF25-213ENST00000480393 ATP10AO60312 1499 aa39.4■■■■□ 3.9
TNFRSF25-213ENST00000480393 TET3O43151 1660 aa39.39■■■■□ 3.9
TNFRSF25-213ENST00000480393 RICTORQ6R327 1708 aa39.39■■■■□ 3.9
TNFRSF25-213ENST00000480393 ABCA6Q8N139 1617 aa39.39■■■■□ 3.9
TNFRSF25-213ENST00000480393 RAPGEF3O95398 923 aa39.39■■■■□ 3.9
TNFRSF25-213ENST00000480393 MROH1Q8NDA8 1641 aa39.38■■■■□ 3.89
TNFRSF25-213ENST00000480393 MIER1Q8N108 512 aa39.37■■■■□ 3.89
TNFRSF25-213ENST00000480393 E9PCH4 1651 aa39.37■■■■□ 3.89
TNFRSF25-213ENST00000480393 EIF4G2P78344 907 aaKnown RBP eCLIP39.34■■■■□ 3.89
TNFRSF25-213ENST00000480393 FRMPD1Q5SYB0 1578 aa39.34■■■■□ 3.89
TNFRSF25-213ENST00000480393 RNF17Q9BXT8 1623 aaKnown RBP39.33■■■■□ 3.89
TNFRSF25-213ENST00000480393 HSPA5P11021 654 aaKnown RBP39.31■■■■□ 3.88
TNFRSF25-213ENST00000480393 UHRF1BP1Q6BDS2 1440 aa39.3■■■■□ 3.88
TNFRSF25-213ENST00000480393 ZNF326Q5BKZ1 582 aaKnown RBP39.3■■■■□ 3.88
TNFRSF25-213ENST00000480393 TSPOAP1O95153 1857 aa39.3■■■■□ 3.88
TNFRSF25-213ENST00000480393 PPRC1Q5VV67 1664 aaKnown RBP39.28■■■■□ 3.88
TNFRSF25-213ENST00000480393 DIP2CQ9Y2E4 1556 aa39.28■■■■□ 3.88
TNFRSF25-213ENST00000480393 TRPM2O94759 1503 aa39.25■■■■□ 3.87
TNFRSF25-213ENST00000480393 SPHKAPQ2M3C7 1700 aa39.25■■■■□ 3.87
TNFRSF25-213ENST00000480393 BCORL1Q5H9F3 1711 aa39.25■■■■□ 3.87
TNFRSF25-213ENST00000480393 DCAF11Q8TEB1 546 aa39.23■■■■□ 3.87
TNFRSF25-213ENST00000480393 PTPRTO14522 1441 aa39.2■■■■□ 3.87
TNFRSF25-213ENST00000480393 DDX10Q13206 875 aaKnown RBP39.2■■■■□ 3.87
TNFRSF25-213ENST00000480393 LMTK2Q8IWU2 1503 aa39.2■■■■□ 3.87
TNFRSF25-213ENST00000480393 EFCAB6Q5THR3 1501 aa39.2■■■■□ 3.87
TNFRSF25-213ENST00000480393 KDM2AQ9Y2K7 1162 aa39.2■■■■□ 3.87
TNFRSF25-213ENST00000480393 ZMYM4Q5VZL5 1548 aa39.19■■■■□ 3.86
TNFRSF25-213ENST00000480393 RALGAPBQ86X10 1494 aa39.19■■■■□ 3.86
TNFRSF25-213ENST00000480393 KIF13AQ9H1H9 1805 aa39.17■■■■□ 3.86
TNFRSF25-213ENST00000480393 CEP152O94986 1710 aa39.17■■■■□ 3.86
TNFRSF25-213ENST00000480393 RGL3Q3MIN7 710 aa39.15■■■■□ 3.86
TNFRSF25-213ENST00000480393 YEATS2Q9ULM3 1422 aa39.14■■■■□ 3.86
TNFRSF25-213ENST00000480393 GGT6Q6P531 493 aa39.11■■■■□ 3.85
TNFRSF25-213ENST00000480393 CLTCL1P53675 1640 aa39.1■■■■□ 3.85
TNFRSF25-213ENST00000480393 SPATA31E1Q6ZUB1 1445 aa39.08■■■■□ 3.85
TNFRSF25-213ENST00000480393 PRAG1Q86YV5 1406 aa39.06■■■■□ 3.84
TNFRSF25-213ENST00000480393 USP47Q96K76 1375 aa39.05■■■■□ 3.84
TNFRSF25-213ENST00000480393 ABCC3O15438 1527 aa39.03■■■■□ 3.84
TNFRSF25-213ENST00000480393 WASHC2CQ9Y4E1 1318 aa39■■■■□ 3.83
TNFRSF25-213ENST00000480393 CARD11Q9BXL7 1154 aa39■■■■□ 3.83
TNFRSF25-213ENST00000480393 WASHC2AQ641Q2 1341 aa38.99■■■■□ 3.83
TNFRSF25-213ENST00000480393 TRPM1Q7Z4N2 1603 aa38.99■■■■□ 3.83
TNFRSF25-213ENST00000480393 ROCK2O75116 1388 aaKnown RBP38.98■■■■□ 3.83
TNFRSF25-213ENST00000480393 CAMSAP1Q5T5Y3 1602 aa38.95■■■■□ 3.83
TNFRSF25-213ENST00000480393 ZC3H13Q5T200 1668 aaKnown RBP38.94■■■■□ 3.82
TNFRSF25-213ENST00000480393 NPATQ14207 1427 aa38.93■■■■□ 3.82
TNFRSF25-213ENST00000480393 NEURL4Q96JN8 1562 aa38.93■■■■□ 3.82
TNFRSF25-213ENST00000480393 CCDC7Q96M83 1385 aa38.92■■■■□ 3.82
TNFRSF25-213ENST00000480393 UGGT1Q9NYU2 1555 aa38.9■■■■□ 3.82
TNFRSF25-213ENST00000480393 POLR1AO95602 1720 aaPredicted RBP38.9■■■■□ 3.82
TNFRSF25-213ENST00000480393 REREQ9P2R6 1566 aa38.89■■■■□ 3.82
TNFRSF25-213ENST00000480393 KIF1BO60333 1816 aa38.87■■■■□ 3.81
TNFRSF25-213ENST00000480393 CNTLNQ9NXG0 1405 aa38.86■■■■□ 3.81
TNFRSF25-213ENST00000480393 STAC3Q96MF2 364 aa38.85■■■■□ 3.81
TNFRSF25-213ENST00000480393 LAMC1P11047 1609 aa38.84■■■■□ 3.81
TNFRSF25-213ENST00000480393 C11orf95C9JLR9 678 aaPredicted RBP38.83■■■■□ 3.81
TNFRSF25-213ENST00000480393 MADDQ8WXG6 1647 aa38.83■■■■□ 3.81
TNFRSF25-213ENST00000480393 GPRASP1Q5JY77 1395 aa38.82■■■■□ 3.8
TNFRSF25-213ENST00000480393 ANP32CO43423 234 aa38.82■■■■□ 3.8
TNFRSF25-213ENST00000480393 YTHDC1Q96MU7 727 aaKnown RBP38.82■■■■□ 3.8
TNFRSF25-213ENST00000480393 COL17A1Q9UMD9 1497 aaPredicted RBP38.81■■■■□ 3.8
TNFRSF25-213ENST00000480393 KIF7Q2M1P5 1343 aa38.81■■■■□ 3.8
TNFRSF25-213ENST00000480393 AGLP35573 1532 aa38.8■■■■□ 3.8
TNFRSF25-213ENST00000480393 ARHGEF40Q8TER5 1519 aa38.8■■■■□ 3.8
TNFRSF25-213ENST00000480393 ARHGAP31Q2M1Z3 1444 aa38.79■■■■□ 3.8
TNFRSF25-213ENST00000480393 CENPBP07199 599 aaPredicted RBP38.78■■■■□ 3.8
TNFRSF25-213ENST00000480393 MROH2AA6NES4 1674 aa38.75■■■■□ 3.79
TNFRSF25-213ENST00000480393 NBPF1Q3BBV0 1214 aa38.75■■■■□ 3.79
TNFRSF25-213ENST00000480393 ADGRB3O60242 1522 aa38.75■■■■□ 3.79
TNFRSF25-213ENST00000480393 NOS1P29475 1434 aa38.74■■■■□ 3.79
TNFRSF25-213ENST00000480393 SIGLEC1Q9BZZ2 1709 aa38.72■■■■□ 3.79
TNFRSF25-213ENST00000480393 CFAP65Q6ZU64 1925 aaKnown RBP38.72■■■■□ 3.79
TNFRSF25-213ENST00000480393 ST20-MTHFSA0A0A6YYL1 179 aa38.71■■■■□ 3.79
TNFRSF25-213ENST00000480393 ARID4BQ4LE39 1312 aaPredicted RBP38.71■■■■□ 3.79
TNFRSF25-213ENST00000480393 MYOM2P54296 1465 aa38.71■■■■□ 3.79
TNFRSF25-213ENST00000480393 CHGAP10645 457 aaKnown RBP38.68■■■■□ 3.78
TNFRSF25-213ENST00000480393 IFT172Q9UG01 1749 aa38.67■■■■□ 3.78
TNFRSF25-213ENST00000480393 SYNMO15061 1565 aa38.67■■■■□ 3.78
TNFRSF25-213ENST00000480393 PPP6R1Q9UPN7 881 aa38.64■■■■□ 3.78
TNFRSF25-213ENST00000480393 PIK3C2BO00750 1634 aa38.64■■■■□ 3.78
TNFRSF25-213ENST00000480393 POLR3GLQ9BT43 218 aa38.61■■■■□ 3.77
TNFRSF25-213ENST00000480393 KIAA1210Q9ULL0 1709 aa38.6■■■■□ 3.77
TNFRSF25-213ENST00000480393 PREX1Q8TCU6 1659 aa38.6■■■■□ 3.77
TNFRSF25-213ENST00000480393 CCER2I3L3R5 266 aa38.58■■■■□ 3.77
TNFRSF25-213ENST00000480393 CLTCQ00610 1675 aaKnown RBP38.54■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms