RNA–Protein interactions for RNA: ENST00000480045.5

LRP8-209, Transcript of LDL receptor related protein 8, humanhuman

TSL 5

Gene LRP8, Length 3,231 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-209ENST00000480045 KIAA1107Q9UPP5 1409 aa25.89■■□□□ 1.74
LRP8-209ENST00000480045 PRDM2Q13029 1718 aa25.89■■□□□ 1.74
LRP8-209ENST00000480045 EPRSP07814 1512 aaKnown RBP25.89■■□□□ 1.73
LRP8-209ENST00000480045 PARD3Q8TEW0 1356 aa25.88■■□□□ 1.73
LRP8-209ENST00000480045 L1TD1Q5T7N2 865 aaKnown RBP25.88■■□□□ 1.73
LRP8-209ENST00000480045 PNNQ9H307 717 aaKnown RBP25.86■■□□□ 1.73
LRP8-209ENST00000480045 ZMYND15Q9H091 742 aa25.86■■□□□ 1.73
LRP8-209ENST00000480045 GZF1Q9H116 711 aaPredicted RBP25.86■■□□□ 1.73
LRP8-209ENST00000480045 ADAMTS8Q9UP79 889 aa25.85■■□□□ 1.73
LRP8-209ENST00000480045 TOPBP1Q92547 1522 aa25.84■■□□□ 1.73
LRP8-209ENST00000480045 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.84■■□□□ 1.73
LRP8-209ENST00000480045 BECN1Q14457 450 aa25.83■■□□□ 1.73
LRP8-209ENST00000480045 SEC24BO95487 1268 aa25.82■■□□□ 1.72
LRP8-209ENST00000480045 KIF14Q15058 1648 aa25.82■■□□□ 1.72
LRP8-209ENST00000480045 PER1O15534 1290 aaPredicted RBP25.82■■□□□ 1.72
LRP8-209ENST00000480045 HSP90AA2PQ14568 343 aaPredicted RBP25.82■■□□□ 1.72
LRP8-209ENST00000480045 RALGAPBQ86X10 1494 aa25.81■■□□□ 1.72
LRP8-209ENST00000480045 SPRYD3Q8NCJ5 442 aa25.8■■□□□ 1.72
LRP8-209ENST00000480045 DUSP27Q5VZP5 1158 aa25.8■■□□□ 1.72
LRP8-209ENST00000480045 PANK3Q9H999 370 aa25.79■■□□□ 1.72
LRP8-209ENST00000480045 CFDP1Q9UEE9 299 aaPredicted RBP25.78■■□□□ 1.72
LRP8-209ENST00000480045 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
LRP8-209ENST00000480045 PANK2Q9BZ23 570 aa25.78■■□□□ 1.72
LRP8-209ENST00000480045 HSP90AA1P07900 732 aaKnown RBP25.77■■□□□ 1.72
LRP8-209ENST00000480045 XRCC6P12956 609 aaKnown RBP eCLIP25.77■■□□□ 1.72
LRP8-209ENST00000480045 USP19O94966 1318 aa25.77■■□□□ 1.72
LRP8-209ENST00000480045 GOLGA6L3A6NEY3 463 aa25.76■■□□□ 1.71
LRP8-209ENST00000480045 WDR43Q15061 677 aaKnown RBP eCLIP25.76■■□□□ 1.71
LRP8-209ENST00000480045 RGL3Q3MIN7 710 aa25.76■■□□□ 1.71
LRP8-209ENST00000480045 NESP48681 1621 aa25.76■■□□□ 1.71
LRP8-209ENST00000480045 NUP155O75694 1391 aa25.75■■□□□ 1.71
LRP8-209ENST00000480045 GOLGA2Q08379 1002 aa25.75■■□□□ 1.71
LRP8-209ENST00000480045 UHRF1BP1Q6BDS2 1440 aa25.73■■□□□ 1.71
LRP8-209ENST00000480045 NBPF1Q3BBV0 1214 aa25.73■■□□□ 1.71
LRP8-209ENST00000480045 BLMP54132 1417 aaPredicted RBP25.73■■□□□ 1.71
LRP8-209ENST00000480045 IGHDP01880 384 aa25.73■■□□□ 1.71
LRP8-209ENST00000480045 PLEKHH1Q9ULM0 1364 aa25.73■■□□□ 1.71
LRP8-209ENST00000480045 BCAR3O75815 825 aa25.71■■□□□ 1.71
LRP8-209ENST00000480045 DNMT1P26358 1616 aaKnown RBP25.71■■□□□ 1.71
LRP8-209ENST00000480045 GAPVD1Q14C86 1478 aa25.71■■□□□ 1.71
LRP8-209ENST00000480045 CCDC146Q8IYE0 955 aa25.67■■□□□ 1.7
LRP8-209ENST00000480045 CLCN1P35523 988 aa25.66■■□□□ 1.7
LRP8-209ENST00000480045 ZMYM4Q5VZL5 1548 aa25.66■■□□□ 1.7
LRP8-209ENST00000480045 ANTXR1Q9H6X2 564 aa25.64■■□□□ 1.69
LRP8-209ENST00000480045 UPF2Q9HAU5 1272 aaKnown RBP25.64■■□□□ 1.69
LRP8-209ENST00000480045 RRP9O43818 475 aaKnown RBP25.63■■□□□ 1.69
LRP8-209ENST00000480045 CANXP27824 592 aaKnown RBP25.63■■□□□ 1.69
LRP8-209ENST00000480045 KIAA0586Q9BVV6 1533 aa25.63■■□□□ 1.69
LRP8-209ENST00000480045 ANKRD50Q9ULJ7 1429 aa25.63■■□□□ 1.69
LRP8-209ENST00000480045 PLEKHH2Q8IVE3 1493 aa25.62■■□□□ 1.69
LRP8-209ENST00000480045 TBC1D2Q9BYX2 928 aa25.61■■□□□ 1.69
LRP8-209ENST00000480045 ANKRD30AQ9BXX3 1397 aa25.61■■□□□ 1.69
LRP8-209ENST00000480045 DISP3Q9P2K9 1392 aa25.61■■□□□ 1.69
LRP8-209ENST00000480045 SPINK5Q9NQ38 1064 aaPredicted RBP25.61■■□□□ 1.69
LRP8-209ENST00000480045 SLFN5Q08AF3 891 aa25.6■■□□□ 1.69
LRP8-209ENST00000480045 COG6Q9Y2V7 657 aa25.59■■□□□ 1.69
LRP8-209ENST00000480045 MCM4P33991 863 aa25.58■■□□□ 1.69
LRP8-209ENST00000480045 PANK1Q8TE04 598 aa25.58■■□□□ 1.68
LRP8-209ENST00000480045 MAPK8IP3Q9UPT6 1336 aa25.56■■□□□ 1.68
LRP8-209ENST00000480045 FSD2A1L4K1 749 aa25.56■■□□□ 1.68
LRP8-209ENST00000480045 PPP2R1AP30153 589 aa25.56■■□□□ 1.68
LRP8-209ENST00000480045 E9PCH4 1651 aa25.56■■□□□ 1.68
LRP8-209ENST00000480045 KNSTRNQ9Y448 316 aa25.56■■□□□ 1.68
LRP8-209ENST00000480045 CAMSAP2Q08AD1 1489 aa25.55■■□□□ 1.68
LRP8-209ENST00000480045 APAF1O14727 1248 aa25.55■■□□□ 1.68
LRP8-209ENST00000480045 WDR62O43379 1518 aa25.54■■□□□ 1.68
LRP8-209ENST00000480045 MYH16Q9H6N6 1097 aa25.54■■□□□ 1.68
LRP8-209ENST00000480045 TRAK2O60296 914 aa25.54■■□□□ 1.68
LRP8-209ENST00000480045 TMF1P82094 1093 aa25.54■■□□□ 1.68
LRP8-209ENST00000480045 TESK2Q96S53 571 aa25.54■■□□□ 1.68
LRP8-209ENST00000480045 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
LRP8-209ENST00000480045 ZNF521Q96K83 1311 aa25.53■■□□□ 1.68
LRP8-209ENST00000480045 EIF3AQ14152 1382 aaKnown RBP25.53■■□□□ 1.68
LRP8-209ENST00000480045 CLUAP1Q96AJ1 413 aa25.53■■□□□ 1.68
LRP8-209ENST00000480045 INSRP06213 1382 aa25.53■■□□□ 1.68
LRP8-209ENST00000480045 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
LRP8-209ENST00000480045 ARHGEF12Q9NZN5 1544 aa25.52■■□□□ 1.68
LRP8-209ENST00000480045 ZNF608Q9ULD9 1512 aaPredicted RBP25.52■■□□□ 1.68
LRP8-209ENST00000480045 KIF21AQ7Z4S6 1674 aa25.51■■□□□ 1.67
LRP8-209ENST00000480045 ESPNB1AK53 854 aa25.5■■□□□ 1.67
LRP8-209ENST00000480045 TBC1D32Q96NH3 1257 aa25.5■■□□□ 1.67
LRP8-209ENST00000480045 MRE11P49959 708 aa25.49■■□□□ 1.67
LRP8-209ENST00000480045 CGNL1Q0VF96 1302 aa25.48■■□□□ 1.67
LRP8-209ENST00000480045 TRIM44Q96DX7 344 aaPredicted RBP25.48■■□□□ 1.67
LRP8-209ENST00000480045 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
LRP8-209ENST00000480045 DMRT2Q9Y5R5 561 aa25.46■■□□□ 1.67
LRP8-209ENST00000480045 ERBB4Q15303 1308 aa25.46■■□□□ 1.67
LRP8-209ENST00000480045 GRPEL1Q9HAV7 217 aa25.46■■□□□ 1.67
LRP8-209ENST00000480045 TSPY4P0CV99 314 aa25.46■■□□□ 1.67
LRP8-209ENST00000480045 TSPY10P0CW01 314 aa25.46■■□□□ 1.67
LRP8-209ENST00000480045 IQGAP2Q13576 1575 aa25.44■■□□□ 1.66
LRP8-209ENST00000480045 PRAG1Q86YV5 1406 aa25.44■■□□□ 1.66
LRP8-209ENST00000480045 ERBINQ96RT1 1412 aa25.44■■□□□ 1.66
LRP8-209ENST00000480045 COL17A1Q9UMD9 1497 aaPredicted RBP25.44■■□□□ 1.66
LRP8-209ENST00000480045 NKTRP30414 1462 aaKnown RBP25.42■■□□□ 1.66
LRP8-209ENST00000480045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.42■■□□□ 1.665e-10■■■□□ 17.5
LRP8-209ENST00000480045 CHMP5Q9NZZ3 219 aa25.42■■□□□ 1.66
LRP8-209ENST00000480045 CENPJQ9HC77 1338 aaPredicted RBP25.42■■□□□ 1.66
LRP8-209ENST00000480045 E9PSI1 815 aa25.41■■□□□ 1.66
LRP8-209ENST00000480045 NLRP1Q9C000 1473 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms