RNA–Protein interactions for RNA: ENST00000479859.1

UBXN2A-204, Transcript of UBX domain protein 2A, humanhuman

TSL 2

Gene UBXN2A, Length 403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-204ENST00000479859 IRF6O14896 467 aa13.06□□□□□ -0.32
UBXN2A-204ENST00000479859 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
UBXN2A-204ENST00000479859 ZNF454Q8N9F8 522 aa13.06□□□□□ -0.32
UBXN2A-204ENST00000479859 TIMELESSQ9UNS1 1208 aa13.06□□□□□ -0.32
UBXN2A-204ENST00000479859 PDE4DQ08499 809 aa13.05□□□□□ -0.32
UBXN2A-204ENST00000479859 NPDC1Q9NQX5 325 aaPredicted RBP13.05□□□□□ -0.32
UBXN2A-204ENST00000479859 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
UBXN2A-204ENST00000479859 SNPHO15079 494 aa13.03□□□□□ -0.32
UBXN2A-204ENST00000479859 GPBP1L1Q9HC44 474 aaPredicted RBP13.03□□□□□ -0.32
UBXN2A-204ENST00000479859 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
UBXN2A-204ENST00000479859 C6orf132Q5T0Z8 1188 aa12.99□□□□□ -0.33
UBXN2A-204ENST00000479859 KDM4CQ9H3R0 1056 aa12.99□□□□□ -0.33
UBXN2A-204ENST00000479859 LHX6Q9UPM6 363 aa12.99□□□□□ -0.33
UBXN2A-204ENST00000479859 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
UBXN2A-204ENST00000479859 ADAM33Q9BZ11 813 aa12.98□□□□□ -0.33
UBXN2A-204ENST00000479859 AMHR2Q16671 573 aa12.97□□□□□ -0.33
UBXN2A-204ENST00000479859 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
UBXN2A-204ENST00000479859 HOXB1P14653 301 aaPredicted RBP12.96□□□□□ -0.33
UBXN2A-204ENST00000479859 PSDA5PKW4 1024 aaPredicted RBP12.95□□□□□ -0.34
UBXN2A-204ENST00000479859 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
UBXN2A-204ENST00000479859 LHX8Q68G74 356 aa12.91□□□□□ -0.34
UBXN2A-204ENST00000479859 PARP9Q8IXQ6 854 aa12.91□□□□□ -0.34
UBXN2A-204ENST00000479859 PADI6Q6TGC4 694 aa12.9□□□□□ -0.34
UBXN2A-204ENST00000479859 BCL2L12Q9HB09 334 aa12.89□□□□□ -0.35
UBXN2A-204ENST00000479859 RBM27Q9P2N5 1060 aaKnown RBP12.89□□□□□ -0.35
UBXN2A-204ENST00000479859 TTLL12Q14166 644 aaPredicted RBP12.88□□□□□ -0.35
UBXN2A-204ENST00000479859 C14orf37Q86TY3 774 aa12.88□□□□□ -0.35
UBXN2A-204ENST00000479859 IL27Q8NEV9 243 aa12.87□□□□□ -0.35
UBXN2A-204ENST00000479859 PRSS12P56730 875 aa12.86□□□□□ -0.35
UBXN2A-204ENST00000479859 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
UBXN2A-204ENST00000479859 OATP04181 439 aa12.84□□□□□ -0.35
UBXN2A-204ENST00000479859 PTPREP23469 700 aa12.84□□□□□ -0.35
UBXN2A-204ENST00000479859 FAM161AQ3B820 660 aa12.84□□□□□ -0.35
UBXN2A-204ENST00000479859 CDCA7LQ96GN5 454 aa12.84□□□□□ -0.35
UBXN2A-204ENST00000479859 ADGRG1Q9Y653 693 aa12.84□□□□□ -0.35
UBXN2A-204ENST00000479859 COL9A1P20849 921 aa12.83□□□□□ -0.36
UBXN2A-204ENST00000479859 PHOX2BQ99453 314 aa12.83□□□□□ -0.36
UBXN2A-204ENST00000479859 FAM117AQ9C073 453 aa12.83□□□□□ -0.36
UBXN2A-204ENST00000479859 PPP1R3GB7ZBB8 358 aa12.82□□□□□ -0.36
UBXN2A-204ENST00000479859 GIGYF2Q6Y7W6 1299 aaKnown RBP12.82□□□□□ -0.36
UBXN2A-204ENST00000479859 METTL3Q86U44 580 aaKnown RBP12.82□□□□□ -0.36
UBXN2A-204ENST00000479859 DDRGK1Q96HY6 314 aa12.81□□□□□ -0.36
UBXN2A-204ENST00000479859 REPIN1Q9BWE0 567 aaKnown RBP12.81□□□□□ -0.36
UBXN2A-204ENST00000479859 CLCN1P35523 988 aa12.8□□□□□ -0.36
UBXN2A-204ENST00000479859 MDM2Q00987 491 aaPredicted RBP12.8□□□□□ -0.36
UBXN2A-204ENST00000479859 PXYLP1Q8TE99 480 aa12.8□□□□□ -0.36
UBXN2A-204ENST00000479859 TMUB1Q9BVT8 246 aa12.79□□□□□ -0.36
UBXN2A-204ENST00000479859 GPCPD1Q9NPB8 672 aa12.79□□□□□ -0.36
UBXN2A-204ENST00000479859 FAM198AQ9UFP1 575 aa12.78□□□□□ -0.36
UBXN2A-204ENST00000479859 PLEKHG3A1L390 1219 aa12.76□□□□□ -0.37
UBXN2A-204ENST00000479859 MS4A1P11836 297 aa12.76□□□□□ -0.37
UBXN2A-204ENST00000479859 RBM46Q8TBY0 533 aaKnown RBP12.76□□□□□ -0.37
UBXN2A-204ENST00000479859 KCNK17Q96T54 332 aa12.75□□□□□ -0.37
UBXN2A-204ENST00000479859 TSKSQ9UJT2 592 aa12.75□□□□□ -0.37
UBXN2A-204ENST00000479859 ERBB3P21860 1342 aa12.74□□□□□ -0.37
UBXN2A-204ENST00000479859 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
UBXN2A-204ENST00000479859 KCNH8Q96L42 1107 aa12.74□□□□□ -0.37
UBXN2A-204ENST00000479859 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
UBXN2A-204ENST00000479859 ST18O60284 1047 aa12.72□□□□□ -0.37
UBXN2A-204ENST00000479859 SSTR3P32745 418 aaPredicted RBP12.71□□□□□ -0.37
UBXN2A-204ENST00000479859 VARS2Q5ST30 1063 aaKnown RBP12.71□□□□□ -0.37
UBXN2A-204ENST00000479859 NBPF26B4DH59 902 aa12.7□□□□□ -0.38
UBXN2A-204ENST00000479859 EYA1Q99502 592 aa12.7□□□□□ -0.38
UBXN2A-204ENST00000479859 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.69□□□□□ -0.38
UBXN2A-204ENST00000479859 PROX2Q3B8N5 592 aa12.69□□□□□ -0.38
UBXN2A-204ENST00000479859 PACS2Q86VP3 889 aa12.69□□□□□ -0.38
UBXN2A-204ENST00000479859 ARXQ96QS3 562 aa12.69□□□□□ -0.38
UBXN2A-204ENST00000479859 FAM217BQ9NTX9 383 aaPredicted RBP12.69□□□□□ -0.38
UBXN2A-204ENST00000479859 ONECUT3O60422 494 aaPredicted RBP12.68□□□□□ -0.38
UBXN2A-204ENST00000479859 EMP3P54852 163 aa12.68□□□□□ -0.38
UBXN2A-204ENST00000479859 NUDT18Q6ZVK8 323 aa12.68□□□□□ -0.38
UBXN2A-204ENST00000479859 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
UBXN2A-204ENST00000479859 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
UBXN2A-204ENST00000479859 C3orf80F5H4A9 247 aa12.67□□□□□ -0.38
UBXN2A-204ENST00000479859 PSEN2P49810 448 aa12.67□□□□□ -0.38
UBXN2A-204ENST00000479859 TATDN2Q93075 761 aa12.67□□□□□ -0.38
UBXN2A-204ENST00000479859 ZBED2Q9BTP6 218 aa12.66□□□□□ -0.38
UBXN2A-204ENST00000479859 ARHGAP33O14559 1287 aa12.65□□□□□ -0.38
UBXN2A-204ENST00000479859 MARVELD3Q96A59 401 aa12.65□□□□□ -0.38
UBXN2A-204ENST00000479859 POTEEQ6S8J3 1075 aa12.64□□□□□ -0.39
UBXN2A-204ENST00000479859 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
UBXN2A-204ENST00000479859 GOPCQ9HD26 462 aa12.64□□□□□ -0.39
UBXN2A-204ENST00000479859 DNAJB2P25686 324 aa12.63□□□□□ -0.39
UBXN2A-204ENST00000479859 FAM205CA6NFA0 338 aa12.61□□□□□ -0.39
UBXN2A-204ENST00000479859 SMAPO00193 183 aa12.61□□□□□ -0.39
UBXN2A-204ENST00000479859 PBX2P40425 430 aa12.61□□□□□ -0.39
UBXN2A-204ENST00000479859 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
UBXN2A-204ENST00000479859 KIAA1468Q9P260 1216 aa12.61□□□□□ -0.39
UBXN2A-204ENST00000479859 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
UBXN2A-204ENST00000479859 ZNF687Q8N1G0 1237 aa12.6□□□□□ -0.39
UBXN2A-204ENST00000479859 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
UBXN2A-204ENST00000479859 SH3D19Q5HYK7 790 aa12.59□□□□□ -0.39
UBXN2A-204ENST00000479859 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
UBXN2A-204ENST00000479859 TMEM134Q9H6X4 195 aa12.59□□□□□ -0.39
UBXN2A-204ENST00000479859 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
UBXN2A-204ENST00000479859 RABGEF1Q9UJ41 708 aa12.58□□□□□ -0.4
UBXN2A-204ENST00000479859 PCMTD1Q96MG8 357 aaPredicted RBP12.57□□□□□ -0.4
UBXN2A-204ENST00000479859 SULF1Q8IWU6 871 aa12.56□□□□□ -0.4
UBXN2A-204ENST00000479859 HS3ST6Q96QI5 342 aa12.55□□□□□ -0.4
UBXN2A-204ENST00000479859 DDX11L8A8MPP1 907 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms