RNA–Protein interactions for RNA: ENST00000479535.2

SYCE1-205, Transcript of synaptonemal complex central element protein 1, humanhuman

TSL 5

Gene SYCE1, Length 2,479 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-205ENST00000479535 ERBINQ96RT1 1412 aa18.57■□□□□ 0.56
SYCE1-205ENST00000479535 IQGAP3Q86VI3 1631 aa18.56■□□□□ 0.56
SYCE1-205ENST00000479535 WDR7Q9Y4E6 1490 aa18.55■□□□□ 0.56
SYCE1-205ENST00000479535 MAGI2Q86UL8 1455 aa18.54■□□□□ 0.56
SYCE1-205ENST00000479535 HNRNPUQ00839 825 aaKnown RBP eCLIP18.54■□□□□ 0.56
SYCE1-205ENST00000479535 POLR3GLQ9BT43 218 aa18.54■□□□□ 0.56
SYCE1-205ENST00000479535 AFAP1Q8N556 730 aa18.53■□□□□ 0.56
SYCE1-205ENST00000479535 ARAP3Q8WWN8 1544 aa18.53■□□□□ 0.56
SYCE1-205ENST00000479535 RGL3Q3MIN7 710 aa18.52■□□□□ 0.56
SYCE1-205ENST00000479535 SPAG9O60271 1321 aaKnown RBP18.51■□□□□ 0.55
SYCE1-205ENST00000479535 ARID4BQ4LE39 1312 aaPredicted RBP18.5■□□□□ 0.55
SYCE1-205ENST00000479535 ROCK2O75116 1388 aaKnown RBP18.5■□□□□ 0.55
SYCE1-205ENST00000479535 DHX29Q7Z478 1369 aaKnown RBP18.5■□□□□ 0.55
SYCE1-205ENST00000479535 ST20-MTHFSA0A0A6YYL1 179 aa18.49■□□□□ 0.55
SYCE1-205ENST00000479535 PRAG1Q86YV5 1406 aa18.49■□□□□ 0.55
SYCE1-205ENST00000479535 FKBP8Q14318 412 aa18.48■□□□□ 0.55
SYCE1-205ENST00000479535 MRS2Q9HD23 443 aa18.48■□□□□ 0.55
SYCE1-205ENST00000479535 ZFYVE16Q7Z3T8 1539 aa18.48■□□□□ 0.55
SYCE1-205ENST00000479535 RTEL1-TNFRSF6BF6WH68 1400 aa18.48■□□□□ 0.55
SYCE1-205ENST00000479535 FANCAO15360 1455 aa18.48■□□□□ 0.55
SYCE1-205ENST00000479535 A2MP01023 1474 aa18.48■□□□□ 0.55
SYCE1-205ENST00000479535 ATP10AO60312 1499 aa18.47■□□□□ 0.55
SYCE1-205ENST00000479535 ABCA9Q8IUA7 1624 aa18.46■□□□□ 0.55
SYCE1-205ENST00000479535 FAM9BQ8IZU0 186 aa18.45■□□□□ 0.54
SYCE1-205ENST00000479535 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
SYCE1-205ENST00000479535 ASXL2Q76L83 1435 aa18.45■□□□□ 0.54
SYCE1-205ENST00000479535 CNGB1Q14028 1251 aaPredicted RBP18.44■□□□□ 0.54
SYCE1-205ENST00000479535 NBPF1Q3BBV0 1214 aa18.44■□□□□ 0.54
SYCE1-205ENST00000479535 BCANQ96GW7 911 aa18.43■□□□□ 0.54
SYCE1-205ENST00000479535 OSCARQ8IYS5 282 aa18.42■□□□□ 0.54
SYCE1-205ENST00000479535 ADGRL1O94910 1474 aa18.41■□□□□ 0.54
SYCE1-205ENST00000479535 NEFLP07196 543 aa18.41■□□□□ 0.54
SYCE1-205ENST00000479535 ATP7AQ04656 1500 aa18.4■□□□□ 0.54
SYCE1-205ENST00000479535 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
SYCE1-205ENST00000479535 INO80Q9ULG1 1556 aaPredicted RBP18.4■□□□□ 0.54
SYCE1-205ENST00000479535 GPRASP1Q5JY77 1395 aa18.4■□□□□ 0.54
SYCE1-205ENST00000479535 E9PCH4 1651 aa18.39■□□□□ 0.53
SYCE1-205ENST00000479535 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
SYCE1-205ENST00000479535 DEPDC5O75140 1603 aa18.37■□□□□ 0.53
SYCE1-205ENST00000479535 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
SYCE1-205ENST00000479535 KIF3BO15066 747 aa18.34■□□□□ 0.53
SYCE1-205ENST00000479535 NPM1P06748 294 aaKnown RBP eCLIP18.34■□□□□ 0.53
SYCE1-205ENST00000479535 PRDM15P57071 1507 aaPredicted RBP18.34■□□□□ 0.53
SYCE1-205ENST00000479535 TRPM2O94759 1503 aa18.33■□□□□ 0.53
SYCE1-205ENST00000479535 LAMC1P11047 1609 aa18.33■□□□□ 0.53
SYCE1-205ENST00000479535 PTPRTO14522 1441 aa18.33■□□□□ 0.52
SYCE1-205ENST00000479535 ZBED9Q6R2W3 1325 aa18.32■□□□□ 0.52
SYCE1-205ENST00000479535 VWDEQ8N2E2 1590 aa18.31■□□□□ 0.52
SYCE1-205ENST00000479535 KANK1Q14678 1352 aa18.31■□□□□ 0.52
SYCE1-205ENST00000479535 TET3O43151 1660 aa18.31■□□□□ 0.52
SYCE1-205ENST00000479535 SPHKAPQ2M3C7 1700 aa18.3■□□□□ 0.52
SYCE1-205ENST00000479535 TESK2Q96S53 571 aa18.3■□□□□ 0.52
SYCE1-205ENST00000479535 CLTCL1P53675 1640 aa18.29■□□□□ 0.52
SYCE1-205ENST00000479535 COL17A1Q9UMD9 1497 aaPredicted RBP18.28■□□□□ 0.52
SYCE1-205ENST00000479535 MROH1Q8NDA8 1641 aa18.28■□□□□ 0.52
SYCE1-205ENST00000479535 DISP3Q9P2K9 1392 aa18.28■□□□□ 0.52
SYCE1-205ENST00000479535 CEP152O94986 1710 aa18.27■□□□□ 0.52
SYCE1-205ENST00000479535 KIDINS220Q9ULH0 1771 aa18.27■□□□□ 0.52
SYCE1-205ENST00000479535 RNF17Q9BXT8 1623 aaKnown RBP18.27■□□□□ 0.52
SYCE1-205ENST00000479535 ZNF518AQ6AHZ1 1483 aa18.27■□□□□ 0.51
SYCE1-205ENST00000479535 CD109Q6YHK3 1445 aa18.26■□□□□ 0.51
SYCE1-205ENST00000479535 MADDQ8WXG6 1647 aa18.26■□□□□ 0.51
SYCE1-205ENST00000479535 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
SYCE1-205ENST00000479535 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
SYCE1-205ENST00000479535 RALBP1Q15311 655 aa18.24■□□□□ 0.51
SYCE1-205ENST00000479535 KTN1Q86UP2 1357 aaKnown RBP18.24■□□□□ 0.51
SYCE1-205ENST00000479535 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
SYCE1-205ENST00000479535 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
SYCE1-205ENST00000479535 PER1O15534 1290 aaPredicted RBP18.23■□□□□ 0.51
SYCE1-205ENST00000479535 TMF1P82094 1093 aa18.22■□□□□ 0.51
SYCE1-205ENST00000479535 TSHZ2Q9NRE2 1034 aa18.22■□□□□ 0.51
SYCE1-205ENST00000479535 UGGT1Q9NYU2 1555 aa18.21■□□□□ 0.51
SYCE1-205ENST00000479535 POGZQ7Z3K3 1410 aa18.21■□□□□ 0.51
SYCE1-205ENST00000479535 STAC3Q96MF2 364 aa18.2■□□□□ 0.5
SYCE1-205ENST00000479535 BRD4O60885 1362 aaPredicted RBP18.2■□□□□ 0.5
SYCE1-205ENST00000479535 EFCAB6Q5THR3 1501 aa18.19■□□□□ 0.5
SYCE1-205ENST00000479535 CFAP74Q9C0B2 1584 aa18.19■□□□□ 0.5
SYCE1-205ENST00000479535 PARD3Q8TEW0 1356 aa18.19■□□□□ 0.5
SYCE1-205ENST00000479535 IQGAP1P46940 1657 aa18.18■□□□□ 0.5
SYCE1-205ENST00000479535 PPRC1Q5VV67 1664 aaKnown RBP18.18■□□□□ 0.5
SYCE1-205ENST00000479535 PANK3Q9H999 370 aa18.17■□□□□ 0.5
SYCE1-205ENST00000479535 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
SYCE1-205ENST00000479535 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
SYCE1-205ENST00000479535 MLH3Q9UHC1 1453 aa18.16■□□□□ 0.5
SYCE1-205ENST00000479535 NEURL4Q96JN8 1562 aa18.16■□□□□ 0.5
SYCE1-205ENST00000479535 FRMPD1Q5SYB0 1578 aa18.16■□□□□ 0.5
SYCE1-205ENST00000479535 SCAF11Q99590 1463 aaKnown RBP18.15■□□□□ 0.5
SYCE1-205ENST00000479535 LMTK2Q8IWU2 1503 aa18.15■□□□□ 0.5
SYCE1-205ENST00000479535 CC2D1BQ5T0F9 858 aaKnown RBP18.14■□□□□ 0.5
SYCE1-205ENST00000479535 NLRP13Q86W25 1043 aa18.14■□□□□ 0.5
SYCE1-205ENST00000479535 HECW2Q9P2P5 1572 aa18.14■□□□□ 0.49
SYCE1-205ENST00000479535 WASHC2CQ9Y4E1 1318 aa18.13■□□□□ 0.49
SYCE1-205ENST00000479535 SMG6Q86US8 1419 aaKnown RBP18.13■□□□□ 0.49
SYCE1-205ENST00000479535 GGT6Q6P531 493 aa18.13■□□□□ 0.49
SYCE1-205ENST00000479535 ADGRF5Q8IZF2 1346 aa18.12■□□□□ 0.49
SYCE1-205ENST00000479535 RAPGEF3O95398 923 aa18.12■□□□□ 0.49
SYCE1-205ENST00000479535 CFAP70Q5T0N1 1121 aa18.11■□□□□ 0.49
SYCE1-205ENST00000479535 MYOM2P54296 1465 aa18.11■□□□□ 0.49
SYCE1-205ENST00000479535 ABCA6Q8N139 1617 aa18.1■□□□□ 0.49
SYCE1-205ENST00000479535 MAP3K4Q9Y6R4 1608 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms