RNA–Protein interactions for RNA: ENST00000479192.1

ZNF3-213, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-213ENST00000479192 PTPRKQ15262 1439 aa17.56■□□□□ 0.4
ZNF3-213ENST00000479192 NCOA1Q15788 1441 aa17.56■□□□□ 0.4
ZNF3-213ENST00000479192 MYOM3Q5VTT5 1437 aa17.56■□□□□ 0.4
ZNF3-213ENST00000479192 TSPY4P0CV99 314 aa17.56■□□□□ 0.4
ZNF3-213ENST00000479192 TSPY10P0CW01 314 aa17.56■□□□□ 0.4
ZNF3-213ENST00000479192 MIA2Q96PC5 1412 aa17.55■□□□□ 0.4
ZNF3-213ENST00000479192 CEP152O94986 1710 aa17.55■□□□□ 0.4
ZNF3-213ENST00000479192 PTPN23Q9H3S7 1636 aa17.55■□□□□ 0.4
ZNF3-213ENST00000479192 KANK4Q5T7N3 995 aaPredicted RBP17.55■□□□□ 0.4
ZNF3-213ENST00000479192 CERKQ8TCT0 537 aa17.55■□□□□ 0.4
ZNF3-213ENST00000479192 KIF3BO15066 747 aa17.54■□□□□ 0.4
ZNF3-213ENST00000479192 APLP2Q06481 763 aa17.53■□□□□ 0.4
ZNF3-213ENST00000479192 DNMT1P26358 1616 aaKnown RBP17.53■□□□□ 0.4
ZNF3-213ENST00000479192 PZPP20742 1482 aa17.5■□□□□ 0.39
ZNF3-213ENST00000479192 PLA2R1Q13018 1463 aa17.5■□□□□ 0.39
ZNF3-213ENST00000479192 A2ML1A8K2U0 1454 aa17.49■□□□□ 0.39
ZNF3-213ENST00000479192 DUOX2Q9NRD8 1548 aa17.47■□□□□ 0.39
ZNF3-213ENST00000479192 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
ZNF3-213ENST00000479192 MROH1Q8NDA8 1641 aa17.47■□□□□ 0.39
ZNF3-213ENST00000479192 WASHC2CQ9Y4E1 1318 aa17.47■□□□□ 0.39
ZNF3-213ENST00000479192 SHANK2Q9UPX8 1470 aa17.45■□□□□ 0.38
ZNF3-213ENST00000479192 TCOF1Q13428 1488 aaKnown RBP17.44■□□□□ 0.38
ZNF3-213ENST00000479192 TNRQ92752 1358 aa17.44■□□□□ 0.38
ZNF3-213ENST00000479192 ABCC3O15438 1527 aa17.44■□□□□ 0.38
ZNF3-213ENST00000479192 PKD2Q13563 968 aa17.43■□□□□ 0.38
ZNF3-213ENST00000479192 NCKAP5LQ9HCH0 1330 aa17.43■□□□□ 0.38
ZNF3-213ENST00000479192 DEPDC5O75140 1603 aa17.43■□□□□ 0.38
ZNF3-213ENST00000479192 IQSEC2Q5JU85 1478 aa17.42■□□□□ 0.38
ZNF3-213ENST00000479192 FGD6Q6ZV73 1430 aa17.41■□□□□ 0.38
ZNF3-213ENST00000479192 FBXO31Q5XUX0 539 aaPredicted RBP17.41■□□□□ 0.38
ZNF3-213ENST00000479192 SPATA31D1Q6ZQQ2 1576 aa17.4■□□□□ 0.38
ZNF3-213ENST00000479192 NLRP1Q9C000 1473 aa17.4■□□□□ 0.38
ZNF3-213ENST00000479192 PRDM15P57071 1507 aaPredicted RBP17.4■□□□□ 0.38
ZNF3-213ENST00000479192 NEURL4Q96JN8 1562 aa17.4■□□□□ 0.38
ZNF3-213ENST00000479192 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
ZNF3-213ENST00000479192 ABCC5O15440 1437 aa17.39■□□□□ 0.38
ZNF3-213ENST00000479192 DAPK1P53355 1430 aa17.39■□□□□ 0.38
ZNF3-213ENST00000479192 ERBINQ96RT1 1412 aa17.38■□□□□ 0.37
ZNF3-213ENST00000479192 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
ZNF3-213ENST00000479192 KIF15Q9NS87 1388 aa17.38■□□□□ 0.37
ZNF3-213ENST00000479192 IQGAP1P46940 1657 aa17.36■□□□□ 0.37
ZNF3-213ENST00000479192 ERVK-7P63135 1459 aa17.35■□□□□ 0.37
ZNF3-213ENST00000479192 ZNF335Q9H4Z2 1342 aaPredicted RBP17.33■□□□□ 0.36
ZNF3-213ENST00000479192 THEMISQ8N1K5 641 aaPredicted RBP17.32■□□□□ 0.36
ZNF3-213ENST00000479192 RRP7BPQ9NSQ0 103 aa17.32■□□□□ 0.36
ZNF3-213ENST00000479192 ANKRD30AQ9BXX3 1397 aa17.31■□□□□ 0.36
ZNF3-213ENST00000479192 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.31■□□□□ 0.36
ZNF3-213ENST00000479192 KDM5AP29375 1690 aaKnown RBP17.29■□□□□ 0.36
ZNF3-213ENST00000479192 PIK3C2BO00750 1634 aa17.29■□□□□ 0.36
ZNF3-213ENST00000479192 ANKLE2Q86XL3 938 aa17.29■□□□□ 0.36
ZNF3-213ENST00000479192 ADGRL2O95490 1459 aa17.29■□□□□ 0.36
ZNF3-213ENST00000479192 ARHGAP31Q2M1Z3 1444 aa17.29■□□□□ 0.36
ZNF3-213ENST00000479192 KANK1Q14678 1352 aa17.28■□□□□ 0.36
ZNF3-213ENST00000479192 STRCP1A6NGW2 1772 aa17.28■□□□□ 0.36
ZNF3-213ENST00000479192 CPS1P31327 1500 aa17.28■□□□□ 0.36
ZNF3-213ENST00000479192 CHIC2Q9UKJ5 165 aa17.28■□□□□ 0.36
ZNF3-213ENST00000479192 MED14O60244 1454 aa17.28■□□□□ 0.36
ZNF3-213ENST00000479192 VWDEQ8N2E2 1590 aa17.28■□□□□ 0.36
ZNF3-213ENST00000479192 GCC2Q8IWJ2 1684 aa17.27■□□□□ 0.36
ZNF3-213ENST00000479192 MYO5BQ9ULV0 1848 aa17.27■□□□□ 0.36
ZNF3-213ENST00000479192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
ZNF3-213ENST00000479192 NPHP4O75161 1426 aaPredicted RBP17.26■□□□□ 0.35
ZNF3-213ENST00000479192 LMTK2Q8IWU2 1503 aa17.26■□□□□ 0.35
ZNF3-213ENST00000479192 FAM50AQ14320 339 aaKnown RBP17.25■□□□□ 0.35
ZNF3-213ENST00000479192 EFCAB6Q5THR3 1501 aa17.24■□□□□ 0.35
ZNF3-213ENST00000479192 TET3O43151 1660 aa17.23■□□□□ 0.35
ZNF3-213ENST00000479192 SYNMO15061 1565 aa17.23■□□□□ 0.35
ZNF3-213ENST00000479192 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
ZNF3-213ENST00000479192 SLIT1O75093 1534 aa17.21■□□□□ 0.35
ZNF3-213ENST00000479192 UNC13BO14795 1591 aa17.2■□□□□ 0.34
ZNF3-213ENST00000479192 XIRP1Q702N8 1843 aaKnown RBP17.2■□□□□ 0.34
ZNF3-213ENST00000479192 UBAP1LF5GYI3 381 aa17.2■□□□□ 0.34
ZNF3-213ENST00000479192 SCAF11Q99590 1463 aaKnown RBP17.19■□□□□ 0.34
ZNF3-213ENST00000479192 ARHGAP23Q9P227 1491 aa17.18■□□□□ 0.34
ZNF3-213ENST00000479192 ANKRD50Q9ULJ7 1429 aa17.18■□□□□ 0.34
ZNF3-213ENST00000479192 E9PCH4 1651 aa17.16■□□□□ 0.34
ZNF3-213ENST00000479192 ADGRB3O60242 1522 aa17.16■□□□□ 0.34
ZNF3-213ENST00000479192 IQGAP3Q86VI3 1631 aa17.14■□□□□ 0.33
ZNF3-213ENST00000479192 RPRD2Q5VT52 1461 aaKnown RBP17.14■□□□□ 0.33
ZNF3-213ENST00000479192 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.33
ZNF3-213ENST00000479192 NOS1P29475 1434 aa17.13■□□□□ 0.33
ZNF3-213ENST00000479192 TXNDC2Q86VQ3 553 aa17.12■□□□□ 0.33
ZNF3-213ENST00000479192 EID1Q9Y6B2 187 aa17.12■□□□□ 0.33
ZNF3-213ENST00000479192 DISP3Q9P2K9 1392 aa17.12■□□□□ 0.33
ZNF3-213ENST00000479192 TOM1O60784 492 aa17.11■□□□□ 0.33
ZNF3-213ENST00000479192 ROCK1Q13464 1354 aa17.11■□□□□ 0.33
ZNF3-213ENST00000479192 TMEM2Q9UHN6 1383 aa17.11■□□□□ 0.33
ZNF3-213ENST00000479192 LRRC7Q96NW7 1537 aa17.11■□□□□ 0.33
ZNF3-213ENST00000479192 LTKP29376 864 aa17.1■□□□□ 0.33
ZNF3-213ENST00000479192 IDI1Q13907 227 aa17.09■□□□□ 0.33
ZNF3-213ENST00000479192 SCAF1Q9H7N4 1312 aaKnown RBP17.09■□□□□ 0.33
ZNF3-213ENST00000479192 TMEM131LA2VDJ0 1609 aa17.09■□□□□ 0.33
ZNF3-213ENST00000479192 ALKQ9UM73 1620 aa17.09■□□□□ 0.33
ZNF3-213ENST00000479192 CHD2O14647 1828 aaKnown RBP17.08■□□□□ 0.33
ZNF3-213ENST00000479192 SPHKAPQ2M3C7 1700 aa17.08■□□□□ 0.32
ZNF3-213ENST00000479192 PIP4K2BP78356 416 aa17.06■□□□□ 0.32
ZNF3-213ENST00000479192 SLC52A1Q9NWF4 448 aa17.06■□□□□ 0.32
ZNF3-213ENST00000479192 PPARGC1BQ86YN6 1023 aaKnown RBP17.05■□□□□ 0.32
ZNF3-213ENST00000479192 ITGAEP38570 1179 aa17.03■□□□□ 0.32
ZNF3-213ENST00000479192 NWD1Q149M9 1564 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms