RNA–Protein interactions for RNA: ENST00000478798.1

BCCIP-205, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 2

Gene BCCIP, Length 1,461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-205ENST00000478798 LHX6Q9UPM6 363 aa8.54□□□□□ -1.04
BCCIP-205ENST00000478798 FBXW7Q969H0 707 aa8.53□□□□□ -1.04
BCCIP-205ENST00000478798 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
BCCIP-205ENST00000478798 SLC24A3Q9HC58 644 aa8.53□□□□□ -1.04
BCCIP-205ENST00000478798 CDHR5Q9HBB8 845 aa8.52□□□□□ -1.05
BCCIP-205ENST00000478798 FCHSD2O94868 740 aa8.51□□□□□ -1.05
BCCIP-205ENST00000478798 ZDHHC16Q969W1 377 aa8.51□□□□□ -1.05
BCCIP-205ENST00000478798 PTGDRQ13258 359 aa8.51□□□□□ -1.05
BCCIP-205ENST00000478798 TSR1Q2NL82 804 aaKnown RBP8.51□□□□□ -1.05
BCCIP-205ENST00000478798 HIC1Q14526 733 aa8.5□□□□□ -1.05
BCCIP-205ENST00000478798 PSDA5PKW4 1024 aaPredicted RBP8.49□□□□□ -1.05
BCCIP-205ENST00000478798 GNPATO15228 680 aa8.49□□□□□ -1.05
BCCIP-205ENST00000478798 PPP4R3BQ5MIZ7 849 aa8.49□□□□□ -1.05
BCCIP-205ENST00000478798 KRI1Q8N9T8 703 aaKnown RBP8.49□□□□□ -1.05
BCCIP-205ENST00000478798 ADAM33Q9BZ11 813 aa8.49□□□□□ -1.05
BCCIP-205ENST00000478798 EMP3P54852 163 aa8.47□□□□□ -1.05
BCCIP-205ENST00000478798 HS3ST6Q96QI5 342 aa8.47□□□□□ -1.05
BCCIP-205ENST00000478798 NPDC1Q9NQX5 325 aaPredicted RBP8.47□□□□□ -1.05
BCCIP-205ENST00000478798 FECHP22830 423 aa8.46□□□□□ -1.05
BCCIP-205ENST00000478798 C6orf132Q5T0Z8 1188 aa8.46□□□□□ -1.05
BCCIP-205ENST00000478798 MAP2K5Q13163 448 aa8.45□□□□□ -1.06
BCCIP-205ENST00000478798 AK7Q96M32 723 aa8.45□□□□□ -1.06
BCCIP-205ENST00000478798 CERKQ8TCT0 537 aa8.44□□□□□ -1.06
BCCIP-205ENST00000478798 BCL2L12Q9HB09 334 aa8.44□□□□□ -1.06
BCCIP-205ENST00000478798 MINK1Q8N4C8 1332 aaPredicted RBP8.43□□□□□ -1.06
BCCIP-205ENST00000478798 FAM205CA6NFA0 338 aa8.43□□□□□ -1.06
BCCIP-205ENST00000478798 CCDC102AQ96A19 550 aa8.43□□□□□ -1.06
BCCIP-205ENST00000478798 IRF6O14896 467 aa8.41□□□□□ -1.06
BCCIP-205ENST00000478798 BRPF1P55201 1214 aaPredicted RBP8.41□□□□□ -1.06
BCCIP-205ENST00000478798 ERBB3P21860 1342 aa8.41□□□□□ -1.06
BCCIP-205ENST00000478798 PTPREP23469 700 aa8.4□□□□□ -1.06
BCCIP-205ENST00000478798 VARS2Q5ST30 1063 aaKnown RBP8.4□□□□□ -1.06
BCCIP-205ENST00000478798 PPP1R3GB7ZBB8 358 aa8.39□□□□□ -1.07
BCCIP-205ENST00000478798 TRIM66O15016 1216 aa8.39□□□□□ -1.07
BCCIP-205ENST00000478798 COL9A1P20849 921 aa8.39□□□□□ -1.07
BCCIP-205ENST00000478798 PADI6Q6TGC4 694 aa8.39□□□□□ -1.07
BCCIP-205ENST00000478798 RNF166Q96A37 237 aaPredicted RBP8.39□□□□□ -1.07
BCCIP-205ENST00000478798 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
BCCIP-205ENST00000478798 NEUROD2Q15784 382 aa8.38□□□□□ -1.07
BCCIP-205ENST00000478798 KCNK17Q96T54 332 aa8.38□□□□□ -1.07
BCCIP-205ENST00000478798 PRSS12P56730 875 aa8.37□□□□□ -1.07
BCCIP-205ENST00000478798 CDCA7LQ96GN5 454 aa8.37□□□□□ -1.07
BCCIP-205ENST00000478798 PDE4DQ08499 809 aa8.36□□□□□ -1.07
BCCIP-205ENST00000478798 TTC13Q8NBP0 860 aa8.36□□□□□ -1.07
BCCIP-205ENST00000478798 KCNH8Q96L42 1107 aa8.35□□□□□ -1.07
BCCIP-205ENST00000478798 AMHR2Q16671 573 aa8.34□□□□□ -1.07
BCCIP-205ENST00000478798 PSEN2P49810 448 aa8.33□□□□□ -1.08
BCCIP-205ENST00000478798 FAM161AQ3B820 660 aa8.33□□□□□ -1.08
BCCIP-205ENST00000478798 GPBP1L1Q9HC44 474 aaPredicted RBP8.33□□□□□ -1.08
BCCIP-205ENST00000478798 POTEEQ6S8J3 1075 aa8.32□□□□□ -1.08
BCCIP-205ENST00000478798 FAM198AQ9UFP1 575 aa8.32□□□□□ -1.08
BCCIP-205ENST00000478798 TSKSQ9UJT2 592 aa8.32□□□□□ -1.08
BCCIP-205ENST00000478798 ADGRG1Q9Y653 693 aa8.32□□□□□ -1.08
BCCIP-205ENST00000478798 TRIM6-TRIM34B2RNG4 842 aa8.32□□□□□ -1.08
BCCIP-205ENST00000478798 ARHGAP33O14559 1287 aa8.32□□□□□ -1.08
BCCIP-205ENST00000478798 METTL3Q86U44 580 aaKnown RBP8.32□□□□□ -1.08
BCCIP-205ENST00000478798 ZNF687Q8N1G0 1237 aa8.32□□□□□ -1.08
BCCIP-205ENST00000478798 AXIN2Q9Y2T1 843 aa8.32□□□□□ -1.08
BCCIP-205ENST00000478798 PBX2P40425 430 aa8.31□□□□□ -1.08
BCCIP-205ENST00000478798 PROX2Q3B8N5 592 aa8.31□□□□□ -1.08
BCCIP-205ENST00000478798 PARP9Q8IXQ6 854 aa8.31□□□□□ -1.08
BCCIP-205ENST00000478798 PXYLP1Q8TE99 480 aa8.31□□□□□ -1.08
BCCIP-205ENST00000478798 ZBED2Q9BTP6 218 aa8.31□□□□□ -1.08
BCCIP-205ENST00000478798 OATP04181 439 aa8.3□□□□□ -1.08
BCCIP-205ENST00000478798 TTLL12Q14166 644 aaPredicted RBP8.3□□□□□ -1.08
BCCIP-205ENST00000478798 PHOX2BQ99453 314 aa8.3□□□□□ -1.08
BCCIP-205ENST00000478798 KDM4CQ9H3R0 1056 aa8.3□□□□□ -1.08
BCCIP-205ENST00000478798 NBPF26B4DH59 902 aa8.29□□□□□ -1.08
BCCIP-205ENST00000478798 DMRTA1Q5VZB9 504 aa8.28□□□□□ -1.08
BCCIP-205ENST00000478798 RBM46Q8TBY0 533 aaKnown RBP8.28□□□□□ -1.08
BCCIP-205ENST00000478798 C3orf80F5H4A9 247 aa8.27□□□□□ -1.09
BCCIP-205ENST00000478798 ONECUT3O60422 494 aaPredicted RBP8.27□□□□□ -1.09
BCCIP-205ENST00000478798 PNMA3Q9UL41 463 aa8.27□□□□□ -1.09
BCCIP-205ENST00000478798 MYT1LQ9UL68 1186 aa8.27□□□□□ -1.09
BCCIP-205ENST00000478798 MDM2Q00987 491 aaPredicted RBP8.26□□□□□ -1.09
BCCIP-205ENST00000478798 TMEM132AQ24JP5 1023 aa8.26□□□□□ -1.09
BCCIP-205ENST00000478798 GIGYF2Q6Y7W6 1299 aaKnown RBP8.26□□□□□ -1.09
BCCIP-205ENST00000478798 NUDT18Q6ZVK8 323 aa8.26□□□□□ -1.09
BCCIP-205ENST00000478798 PACS2Q86VP3 889 aa8.26□□□□□ -1.09
BCCIP-205ENST00000478798 NLRP7Q8WX94 980 aa8.26□□□□□ -1.09
BCCIP-205ENST00000478798 CLCN1P35523 988 aa8.26□□□□□ -1.09
BCCIP-205ENST00000478798 TATDN2Q93075 761 aa8.26□□□□□ -1.09
BCCIP-205ENST00000478798 EYA1Q99502 592 aa8.26□□□□□ -1.09
BCCIP-205ENST00000478798 REPIN1Q9BWE0 567 aaKnown RBP8.26□□□□□ -1.09
BCCIP-205ENST00000478798 SLC4A5Q9BY07 1137 aa8.26□□□□□ -1.09
BCCIP-205ENST00000478798 GPCPD1Q9NPB8 672 aa8.26□□□□□ -1.09
BCCIP-205ENST00000478798 TMUB1Q9BVT8 246 aa8.25□□□□□ -1.09
BCCIP-205ENST00000478798 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.24□□□□□ -1.09
BCCIP-205ENST00000478798 SMAPO00193 183 aa8.24□□□□□ -1.09
BCCIP-205ENST00000478798 KIAA1468Q9P260 1216 aa8.24□□□□□ -1.09
BCCIP-205ENST00000478798 RABGEF1Q9UJ41 708 aa8.24□□□□□ -1.09
BCCIP-205ENST00000478798 RCCD1A6NED2 376 aa8.23□□□□□ -1.09
BCCIP-205ENST00000478798 MS4A1P11836 297 aa8.22□□□□□ -1.09
BCCIP-205ENST00000478798 DNAJB2P25686 324 aa8.22□□□□□ -1.09
BCCIP-205ENST00000478798 VPS9D1Q9Y2B5 631 aa8.22□□□□□ -1.09
BCCIP-205ENST00000478798 FAM117AQ9C073 453 aa8.21□□□□□ -1.09
BCCIP-205ENST00000478798 LSM11P83369 360 aaKnown RBP eCLIP8.2□□□□□ -1.1
BCCIP-205ENST00000478798 IL27Q8NEV9 243 aa8.2□□□□□ -1.1
BCCIP-205ENST00000478798 DDRGK1Q96HY6 314 aa8.2□□□□□ -1.1
BCCIP-205ENST00000478798 SEPT9Q9UHD8 586 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms