RNA–Protein interactions for RNA: ENST00000478720.1

ITSN2-211, Transcript of intersectin 2, humanhuman

TSL 2

Gene ITSN2, Length 2,035 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-211ENST00000478720 DUOX2Q9NRD8 1548 aa20.54■□□□□ 0.88
ITSN2-211ENST00000478720 ZBED9Q6R2W3 1325 aa20.54■□□□□ 0.88
ITSN2-211ENST00000478720 FAM9BQ8IZU0 186 aa20.54■□□□□ 0.88
ITSN2-211ENST00000478720 PLCH2O75038 1416 aa20.53■□□□□ 0.88
ITSN2-211ENST00000478720 DCAF11Q8TEB1 546 aa20.53■□□□□ 0.88
ITSN2-211ENST00000478720 CCDC144AA2RUR9 1427 aa20.53■□□□□ 0.88
ITSN2-211ENST00000478720 TRPM1Q7Z4N2 1603 aa20.53■□□□□ 0.88
ITSN2-211ENST00000478720 PLA2R1Q13018 1463 aa20.52■□□□□ 0.88
ITSN2-211ENST00000478720 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
ITSN2-211ENST00000478720 KDM2AQ9Y2K7 1162 aa20.52■□□□□ 0.88
ITSN2-211ENST00000478720 PRAG1Q86YV5 1406 aa20.51■□□□□ 0.87
ITSN2-211ENST00000478720 ERBINQ96RT1 1412 aa20.51■□□□□ 0.87
ITSN2-211ENST00000478720 ABCC1P33527 1531 aa20.49■□□□□ 0.87
ITSN2-211ENST00000478720 E9PCH4 1651 aa20.48■□□□□ 0.87
ITSN2-211ENST00000478720 POLR3GLQ9BT43 218 aa20.48■□□□□ 0.87
ITSN2-211ENST00000478720 ATP10AO60312 1499 aa20.47■□□□□ 0.87
ITSN2-211ENST00000478720 ST20-MTHFSA0A0A6YYL1 179 aa20.47■□□□□ 0.87
ITSN2-211ENST00000478720 LAMC1P11047 1609 aa20.46■□□□□ 0.87
ITSN2-211ENST00000478720 A2MP01023 1474 aa20.46■□□□□ 0.87
ITSN2-211ENST00000478720 EFCAB2Q5VUJ9 269 aa20.46■□□□□ 0.87
ITSN2-211ENST00000478720 ERICH6BQ5W0A0 696 aa20.45■□□□□ 0.86
ITSN2-211ENST00000478720 ARAP3Q8WWN8 1544 aa20.44■□□□□ 0.86
ITSN2-211ENST00000478720 GPRASP1Q5JY77 1395 aa20.44■□□□□ 0.86
ITSN2-211ENST00000478720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.44■□□□□ 0.86
ITSN2-211ENST00000478720 EIF2AK4Q9P2K8 1649 aaKnown RBP20.41■□□□□ 0.86
ITSN2-211ENST00000478720 TRAPPC8Q9Y2L5 1435 aa20.41■□□□□ 0.86
ITSN2-211ENST00000478720 KTN1Q86UP2 1357 aaKnown RBP20.41■□□□□ 0.86
ITSN2-211ENST00000478720 PRDM15P57071 1507 aaPredicted RBP20.4■□□□□ 0.86
ITSN2-211ENST00000478720 MYT1Q01538 1121 aa20.39■□□□□ 0.85
ITSN2-211ENST00000478720 IRX6P78412 446 aaPredicted RBP20.38■□□□□ 0.85
ITSN2-211ENST00000478720 RTEL1-TNFRSF6BF6WH68 1400 aa20.38■□□□□ 0.85
ITSN2-211ENST00000478720 RGL3Q3MIN7 710 aa20.37■□□□□ 0.85
ITSN2-211ENST00000478720 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
ITSN2-211ENST00000478720 ZFYVE16Q7Z3T8 1539 aa20.36■□□□□ 0.85
ITSN2-211ENST00000478720 PNISRQ8TF01 805 aaKnown RBP20.35■□□□□ 0.85
ITSN2-211ENST00000478720 RALBP1Q15311 655 aa20.34■□□□□ 0.85
ITSN2-211ENST00000478720 NBPF1Q3BBV0 1214 aa20.34■□□□□ 0.85
ITSN2-211ENST00000478720 COL17A1Q9UMD9 1497 aaPredicted RBP20.34■□□□□ 0.85
ITSN2-211ENST00000478720 CNGB1Q14028 1251 aaPredicted RBP20.34■□□□□ 0.85
ITSN2-211ENST00000478720 BRD4O60885 1362 aaPredicted RBP20.34■□□□□ 0.85
ITSN2-211ENST00000478720 RNF17Q9BXT8 1623 aaKnown RBP20.33■□□□□ 0.85
ITSN2-211ENST00000478720 MYBBP1AQ9BQG0 1328 aaKnown RBP20.33■□□□□ 0.84
ITSN2-211ENST00000478720 PPP4R2Q9NY27 417 aa20.32■□□□□ 0.84
ITSN2-211ENST00000478720 SPAG9O60271 1321 aaKnown RBP20.32■□□□□ 0.84
ITSN2-211ENST00000478720 DEPDC5O75140 1603 aa20.32■□□□□ 0.84
ITSN2-211ENST00000478720 WDR7Q9Y4E6 1490 aa20.32■□□□□ 0.84
ITSN2-211ENST00000478720 ABCA9Q8IUA7 1624 aa20.31■□□□□ 0.84
ITSN2-211ENST00000478720 TMC1Q8TDI8 760 aa20.31■□□□□ 0.84
ITSN2-211ENST00000478720 LRPPRCP42704 1394 aaKnown RBP20.31■□□□□ 0.84
ITSN2-211ENST00000478720 TRPM2O94759 1503 aa20.29■□□□□ 0.84
ITSN2-211ENST00000478720 INO80Q9ULG1 1556 aaPredicted RBP20.29■□□□□ 0.84
ITSN2-211ENST00000478720 TESK2Q96S53 571 aa20.28■□□□□ 0.84
ITSN2-211ENST00000478720 NUDCQ9Y266 331 aa20.28■□□□□ 0.84
ITSN2-211ENST00000478720 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
ITSN2-211ENST00000478720 PARD3Q8TEW0 1356 aa20.28■□□□□ 0.84
ITSN2-211ENST00000478720 CEP152O94986 1710 aa20.27■□□□□ 0.84
ITSN2-211ENST00000478720 SPHKAPQ2M3C7 1700 aa20.27■□□□□ 0.84
ITSN2-211ENST00000478720 MADDQ8WXG6 1647 aa20.26■□□□□ 0.83
ITSN2-211ENST00000478720 AFAP1Q8N556 730 aa20.26■□□□□ 0.83
ITSN2-211ENST00000478720 TET3O43151 1660 aa20.26■□□□□ 0.83
ITSN2-211ENST00000478720 PTPRTO14522 1441 aa20.26■□□□□ 0.83
ITSN2-211ENST00000478720 ATP7AQ04656 1500 aa20.26■□□□□ 0.83
ITSN2-211ENST00000478720 DISP3Q9P2K9 1392 aa20.25■□□□□ 0.83
ITSN2-211ENST00000478720 VWDEQ8N2E2 1590 aa20.25■□□□□ 0.83
ITSN2-211ENST00000478720 PER1O15534 1290 aaPredicted RBP20.24■□□□□ 0.83
ITSN2-211ENST00000478720 FANCAO15360 1455 aa20.24■□□□□ 0.83
ITSN2-211ENST00000478720 RNF123Q5XPI4 1314 aa20.23■□□□□ 0.83
ITSN2-211ENST00000478720 WASHC2CQ9Y4E1 1318 aa20.22■□□□□ 0.83
ITSN2-211ENST00000478720 IQGAP1P46940 1657 aa20.22■□□□□ 0.83
ITSN2-211ENST00000478720 CLTCL1P53675 1640 aa20.22■□□□□ 0.83
ITSN2-211ENST00000478720 NLRP13Q86W25 1043 aa20.21■□□□□ 0.83
ITSN2-211ENST00000478720 TMF1P82094 1093 aa20.19■□□□□ 0.82
ITSN2-211ENST00000478720 STAC3Q96MF2 364 aa20.19■□□□□ 0.82
ITSN2-211ENST00000478720 ADGRL1O94910 1474 aa20.18■□□□□ 0.82
ITSN2-211ENST00000478720 NEURL4Q96JN8 1562 aa20.18■□□□□ 0.82
ITSN2-211ENST00000478720 KANK1Q14678 1352 aa20.17■□□□□ 0.82
ITSN2-211ENST00000478720 SCAPERQ9BY12 1400 aa20.17■□□□□ 0.82
ITSN2-211ENST00000478720 MROH1Q8NDA8 1641 aa20.16■□□□□ 0.82
ITSN2-211ENST00000478720 ASXL2Q76L83 1435 aa20.15■□□□□ 0.82
ITSN2-211ENST00000478720 B4GALNT3Q6L9W6 998 aa20.14■□□□□ 0.81
ITSN2-211ENST00000478720 PANK3Q9H999 370 aa20.14■□□□□ 0.81
ITSN2-211ENST00000478720 KIAA1210Q9ULL0 1709 aa20.14■□□□□ 0.81
ITSN2-211ENST00000478720 INSRP06213 1382 aa20.14■□□□□ 0.81
ITSN2-211ENST00000478720 ZMYM4Q5VZL5 1548 aa20.13■□□□□ 0.81
ITSN2-211ENST00000478720 SCAF11Q99590 1463 aaKnown RBP20.12■□□□□ 0.81
ITSN2-211ENST00000478720 KIDINS220Q9ULH0 1771 aa20.1■□□□□ 0.81
ITSN2-211ENST00000478720 KIF3BO15066 747 aa20.1■□□□□ 0.81
ITSN2-211ENST00000478720 SYNMO15061 1565 aa20.09■□□□□ 0.81
ITSN2-211ENST00000478720 CC2D1BQ5T0F9 858 aaKnown RBP20.09■□□□□ 0.81
ITSN2-211ENST00000478720 ANP32EQ9BTT0 268 aa20.09■□□□□ 0.81
ITSN2-211ENST00000478720 EFCAB6Q5THR3 1501 aa20.08■□□□□ 0.81
ITSN2-211ENST00000478720 SENP3-EIF4A1A0A087X0R7 540 aa20.08■□□□□ 0.8
ITSN2-211ENST00000478720 BLMP54132 1417 aaPredicted RBP20.08■□□□□ 0.8
ITSN2-211ENST00000478720 MYOM2P54296 1465 aa20.07■□□□□ 0.8
ITSN2-211ENST00000478720 PDE3BQ13370 1112 aa20.06■□□□□ 0.8
ITSN2-211ENST00000478720 MAP3K4Q9Y6R4 1608 aa20.06■□□□□ 0.8
ITSN2-211ENST00000478720 LMTK2Q8IWU2 1503 aa20.06■□□□□ 0.8
ITSN2-211ENST00000478720 FANCIQ9NVI1 1328 aa20.05■□□□□ 0.8
ITSN2-211ENST00000478720 KIF1BO60333 1816 aa20.05■□□□□ 0.8
ITSN2-211ENST00000478720 ZNF518AQ6AHZ1 1483 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms