RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	TONSL	Q96HA7	1378 aa		13.76	□□□□□ -0.21
ATG7-223	ENST00000478638	ESF1	Q9H501	851 aa	Known RBP	13.76	□□□□□ -0.21
ATG7-223	ENST00000478638	KIF3B	O15066	747 aa		13.75	□□□□□ -0.21
ATG7-223	ENST00000478638	GGT6	Q6P531	493 aa		13.75	□□□□□ -0.21
ATG7-223	ENST00000478638	UNC13B	O14795	1591 aa		13.75	□□□□□ -0.21
ATG7-223	ENST00000478638	ARHGEF40	Q8TER5	1519 aa		13.74	□□□□□ -0.21
ATG7-223	ENST00000478638	A2M	P01023	1474 aa		13.74	□□□□□ -0.21
ATG7-223	ENST00000478638	KIF15	Q9NS87	1388 aa		13.74	□□□□□ -0.21
ATG7-223	ENST00000478638	KDM4F	A0A1W2PPD8	638 aa		13.73	□□□□□ -0.21
ATG7-223	ENST00000478638	NEUROD1	Q13562	356 aa		13.73	□□□□□ -0.21
ATG7-223	ENST00000478638	DIP2C	Q9Y2E4	1556 aa		13.71	□□□□□ -0.21
ATG7-223	ENST00000478638	KIDINS220	Q9ULH0	1771 aa		13.71	□□□□□ -0.22
ATG7-223	ENST00000478638	TRIM52	Q96A61	297 aa		13.7	□□□□□ -0.22
ATG7-223	ENST00000478638	PPP6R1	Q9UPN7	881 aa		13.7	□□□□□ -0.22
ATG7-223	ENST00000478638	INO80	Q9ULG1	1556 aa	Predicted RBP	13.7	□□□□□ -0.22
ATG7-223	ENST00000478638	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.69	□□□□□ -0.22
ATG7-223	ENST00000478638	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	3e-6	■■□□□ 11.7
ATG7-223	ENST00000478638	ABCA6	Q8N139	1617 aa		13.68	□□□□□ -0.22
ATG7-223	ENST00000478638	DUOX2	Q9NRD8	1548 aa		13.68	□□□□□ -0.22
ATG7-223	ENST00000478638	AGL	P35573	1532 aa		13.67	□□□□□ -0.22
ATG7-223	ENST00000478638	IQGAP3	Q86VI3	1631 aa		13.67	□□□□□ -0.22
ATG7-223	ENST00000478638	WASHC2C	Q9Y4E1	1318 aa		13.66	□□□□□ -0.22
ATG7-223	ENST00000478638	PLPPR3	Q6T4P5	718 aa		13.66	□□□□□ -0.22
ATG7-223	ENST00000478638	MIER1	Q8N108	512 aa		13.66	□□□□□ -0.22
ATG7-223	ENST00000478638	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.66	□□□□□ -0.22
ATG7-223	ENST00000478638	RERE	Q9P2R6	1566 aa		13.66	□□□□□ -0.22
ATG7-223	ENST00000478638	ERBIN	Q96RT1	1412 aa		13.65	□□□□□ -0.22
ATG7-223	ENST00000478638	FAM135A	Q9P2D6	1515 aa		13.64	□□□□□ -0.23
ATG7-223	ENST00000478638	KANK1	Q14678	1352 aa		13.62	□□□□□ -0.23
ATG7-223	ENST00000478638	UHRF1BP1	Q6BDS2	1440 aa		13.62	□□□□□ -0.23
ATG7-223	ENST00000478638	DEPDC5	O75140	1603 aa		13.61	□□□□□ -0.23
ATG7-223	ENST00000478638	NUP155	O75694	1391 aa		13.61	□□□□□ -0.23
ATG7-223	ENST00000478638	CEBPA	P49715	358 aa	Predicted RBP	13.61	□□□□□ -0.23
ATG7-223	ENST00000478638	L3MBTL2	Q969R5	705 aa		13.61	□□□□□ -0.23
ATG7-223	ENST00000478638	CNTLN	Q9NXG0	1405 aa		13.6	□□□□□ -0.23
ATG7-223	ENST00000478638	POLR1A	O95602	1720 aa	Predicted RBP	13.59	□□□□□ -0.23
ATG7-223	ENST00000478638	SPATA31E1	Q6ZUB1	1445 aa		13.59	□□□□□ -0.23
ATG7-223	ENST00000478638	PKD2	Q13563	968 aa		13.59	□□□□□ -0.23
ATG7-223	ENST00000478638	FOXD1	Q16676	465 aa		13.59	□□□□□ -0.23
ATG7-223	ENST00000478638	ZMYM3	Q14202	1370 aa		13.58	□□□□□ -0.23
ATG7-223	ENST00000478638	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.58	□□□□□ -0.24
ATG7-223	ENST00000478638	BCORL1	Q5H9F3	1711 aa		13.58	□□□□□ -0.24
ATG7-223	ENST00000478638	VWDE	Q8N2E2	1590 aa		13.58	□□□□□ -0.24
ATG7-223	ENST00000478638	SIGLEC1	Q9BZZ2	1709 aa		13.56	□□□□□ -0.24
ATG7-223	ENST00000478638	PTPRM	P28827	1452 aa		13.56	□□□□□ -0.24
ATG7-223	ENST00000478638	PLA2R1	Q13018	1463 aa		13.55	□□□□□ -0.24
ATG7-223	ENST00000478638	ADAMTSL3	P82987	1691 aa		13.55	□□□□□ -0.24
ATG7-223	ENST00000478638	NBPF8	Q3BBV2	869 aa		13.54	□□□□□ -0.24
ATG7-223	ENST00000478638	RALGAPB	Q86X10	1494 aa		13.54	□□□□□ -0.24
ATG7-223	ENST00000478638	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.53	□□□□□ -0.24
ATG7-223	ENST00000478638	MADD	Q8WXG6	1647 aa		13.53	□□□□□ -0.24
ATG7-223	ENST00000478638	MROH1	Q8NDA8	1641 aa		13.51	□□□□□ -0.25
ATG7-223	ENST00000478638	NEURL4	Q96JN8	1562 aa		13.51	□□□□□ -0.25
ATG7-223	ENST00000478638	PRDM15	P57071	1507 aa	Predicted RBP	13.51	□□□□□ -0.25
ATG7-223	ENST00000478638	CENPB	P07199	599 aa	Predicted RBP	13.51	□□□□□ -0.25
ATG7-223	ENST00000478638	TET3	O43151	1660 aa		13.5	□□□□□ -0.25
ATG7-223	ENST00000478638	HSPA5	P11021	654 aa	Known RBP	13.49	□□□□□ -0.25
ATG7-223	ENST00000478638	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
ATG7-223	ENST00000478638		E9PCH4	1651 aa		13.49	□□□□□ -0.25
ATG7-223	ENST00000478638	LAMC1	P11047	1609 aa		13.49	□□□□□ -0.25
ATG7-223	ENST00000478638	RNF17	Q9BXT8	1623 aa	Known RBP	13.49	□□□□□ -0.25
ATG7-223	ENST00000478638	PTPRT	O14522	1441 aa		13.48	□□□□□ -0.25
ATG7-223	ENST00000478638	RIMS1	Q86UR5	1692 aa	Known RBP	13.48	□□□□□ -0.25
ATG7-223	ENST00000478638	ABCC3	O15438	1527 aa		13.48	□□□□□ -0.25
ATG7-223	ENST00000478638	LMTK2	Q8IWU2	1503 aa		13.48	□□□□□ -0.25
ATG7-223	ENST00000478638	TRPM2	O94759	1503 aa		13.47	□□□□□ -0.25
ATG7-223	ENST00000478638	NPAT	Q14207	1427 aa		13.47	□□□□□ -0.25
ATG7-223	ENST00000478638	FER1L4	A9Z1Z3	1794 aa		13.46	□□□□□ -0.25
ATG7-223	ENST00000478638	CCDC144A	A2RUR9	1427 aa		13.46	□□□□□ -0.26
ATG7-223	ENST00000478638	ARHGAP31	Q2M1Z3	1444 aa		13.46	□□□□□ -0.26
ATG7-223	ENST00000478638	TRPM1	Q7Z4N2	1603 aa		13.46	□□□□□ -0.26
ATG7-223	ENST00000478638	TNR	Q92752	1358 aa		13.45	□□□□□ -0.26
ATG7-223	ENST00000478638	WASHC2A	Q641Q2	1341 aa		13.45	□□□□□ -0.26
ATG7-223	ENST00000478638	SPHKAP	Q2M3C7	1700 aa		13.45	□□□□□ -0.26
ATG7-223	ENST00000478638	CCER2	I3L3R5	266 aa		13.45	□□□□□ -0.26
ATG7-223	ENST00000478638	DDX10	Q13206	875 aa	Known RBP	13.45	□□□□□ -0.26
ATG7-223	ENST00000478638	GPRASP1	Q5JY77	1395 aa		13.45	□□□□□ -0.26
ATG7-223	ENST00000478638	CEP152	O94986	1710 aa		13.44	□□□□□ -0.26
ATG7-223	ENST00000478638	CCDC7	Q96M83	1385 aa		13.44	□□□□□ -0.26
ATG7-223	ENST00000478638	CLTC	Q00610	1675 aa	Known RBP	13.44	□□□□□ -0.26
ATG7-223	ENST00000478638	PRAG1	Q86YV5	1406 aa		13.43	□□□□□ -0.26
ATG7-223	ENST00000478638	STAG3	Q9UJ98	1225 aa		13.43	□□□□□ -0.26
ATG7-223	ENST00000478638	SLC52A1	Q9NWF4	448 aa		13.42	□□□□□ -0.26
ATG7-223	ENST00000478638	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.41	□□□□□ -0.26
ATG7-223	ENST00000478638	EFCAB6	Q5THR3	1501 aa		13.4	□□□□□ -0.26
ATG7-223	ENST00000478638	HSPA2	P54652	639 aa		13.4	□□□□□ -0.26
ATG7-223	ENST00000478638	IDI1	Q13907	227 aa		13.4	□□□□□ -0.26
ATG7-223	ENST00000478638	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.4	□□□□□ -0.26
ATG7-223	ENST00000478638	USP47	Q96K76	1375 aa		13.4	□□□□□ -0.26
ATG7-223	ENST00000478638	ERVK-7	P63135	1459 aa		13.4	□□□□□ -0.26
ATG7-223	ENST00000478638	MROH2A	A6NES4	1674 aa		13.4	□□□□□ -0.26
ATG7-223	ENST00000478638	SCAF1	Q9H7N4	1312 aa	Known RBP	13.39	□□□□□ -0.27
ATG7-223	ENST00000478638	CHGA	P10645	457 aa	Known RBP	13.39	□□□□□ -0.27
ATG7-223	ENST00000478638	ZC3H13	Q5T200	1668 aa	Known RBP	13.39	□□□□□ -0.27
ATG7-223	ENST00000478638	CLTCL1	P53675	1640 aa		13.38	□□□□□ -0.27
ATG7-223	ENST00000478638	C3	P01024	1663 aa		13.37	□□□□□ -0.27
ATG7-223	ENST00000478638	C11orf95	C9JLR9	678 aa	Predicted RBP	13.37	□□□□□ -0.27
ATG7-223	ENST00000478638	STAC3	Q96MF2	364 aa		13.37	□□□□□ -0.27
ATG7-223	ENST00000478638	NOS1	P29475	1434 aa		13.37	□□□□□ -0.27
ATG7-223	ENST00000478638	CAMSAP1	Q5T5Y3	1602 aa		13.36	□□□□□ -0.27

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