RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 CEP170Q5SW79 1584 aa15.93■□□□□ 0.14
PCCB-214ENST00000478469 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.93■□□□□ 0.14
PCCB-214ENST00000478469 AKNAQ7Z591 1439 aa15.93■□□□□ 0.14
PCCB-214ENST00000478469 SENP3-EIF4A1A0A087X0R7 540 aa15.93■□□□□ 0.14
PCCB-214ENST00000478469 FKBP8Q14318 412 aa15.93■□□□□ 0.14
PCCB-214ENST00000478469 KTN1Q86UP2 1357 aaKnown RBP15.92■□□□□ 0.14
PCCB-214ENST00000478469 PLCH2O75038 1416 aa15.91■□□□□ 0.14
PCCB-214ENST00000478469 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.91■□□□□ 0.14
PCCB-214ENST00000478469 TERF2IPQ9NYB0 399 aa15.91■□□□□ 0.14
PCCB-214ENST00000478469 CCER2I3L3R5 266 aa15.91■□□□□ 0.14
PCCB-214ENST00000478469 SOX12O15370 315 aa15.91■□□□□ 0.14
PCCB-214ENST00000478469 SLC52A1Q9NWF4 448 aa15.9■□□□□ 0.14
PCCB-214ENST00000478469 WDR7Q9Y4E6 1490 aa15.9■□□□□ 0.14
PCCB-214ENST00000478469 U2SURPO15042 1029 aaKnown RBP15.9■□□□□ 0.14
PCCB-214ENST00000478469 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
PCCB-214ENST00000478469 DENND4BO75064 1496 aaPredicted RBP15.9■□□□□ 0.14
PCCB-214ENST00000478469 BCL11AQ9H165 835 aa15.89■□□□□ 0.13
PCCB-214ENST00000478469 NEUROD2Q15784 382 aa15.89■□□□□ 0.13
PCCB-214ENST00000478469 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
PCCB-214ENST00000478469 RALBP1Q15311 655 aa15.87■□□□□ 0.13
PCCB-214ENST00000478469 POGZQ7Z3K3 1410 aa15.87■□□□□ 0.13
PCCB-214ENST00000478469 NUTM2FA1L443 756 aa15.86■□□□□ 0.13
PCCB-214ENST00000478469 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
PCCB-214ENST00000478469 EVC2Q86UK5 1308 aa15.85■□□□□ 0.13
PCCB-214ENST00000478469 SAMD9Q5K651 1589 aa15.85■□□□□ 0.13
PCCB-214ENST00000478469 NGDNQ8NEJ9 315 aaKnown RBP15.85■□□□□ 0.13
PCCB-214ENST00000478469 MINK1Q8N4C8 1332 aaPredicted RBP15.85■□□□□ 0.13
PCCB-214ENST00000478469 A0A0G2JS52 829 aa15.84■□□□□ 0.13
PCCB-214ENST00000478469 CFAP70Q5T0N1 1121 aa15.84■□□□□ 0.13
PCCB-214ENST00000478469 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.12
PCCB-214ENST00000478469 CENPJQ9HC77 1338 aaPredicted RBP15.83■□□□□ 0.12
PCCB-214ENST00000478469 TMEM132EQ6IEE7 984 aa15.82■□□□□ 0.12
PCCB-214ENST00000478469 PANK3Q9H999 370 aa15.82■□□□□ 0.12
PCCB-214ENST00000478469 TXNDC2Q86VQ3 553 aa15.81■□□□□ 0.12
PCCB-214ENST00000478469 DHX29Q7Z478 1369 aaKnown RBP15.8■□□□□ 0.12
PCCB-214ENST00000478469 THEMISQ8N1K5 641 aaPredicted RBP15.8■□□□□ 0.12
PCCB-214ENST00000478469 ITSN2Q9NZM3 1697 aa15.79■□□□□ 0.12
PCCB-214ENST00000478469 PTPRKQ15262 1439 aa15.78■□□□□ 0.12
PCCB-214ENST00000478469 CFAP43Q8NDM7 1665 aa15.78■□□□□ 0.12
PCCB-214ENST00000478469 TEX14Q8IWB6 1497 aa15.78■□□□□ 0.12
PCCB-214ENST00000478469 CHD1O14646 1710 aa15.78■□□□□ 0.12
PCCB-214ENST00000478469 NBPF8Q3BBV2 869 aa15.78■□□□□ 0.12
PCCB-214ENST00000478469 NLRP13Q86W25 1043 aa15.78■□□□□ 0.12
PCCB-214ENST00000478469 NBPF1Q3BBV0 1214 aa15.78■□□□□ 0.12
PCCB-214ENST00000478469 ANKRD30BQ9BXX2 1392 aa15.77■□□□□ 0.12
PCCB-214ENST00000478469 CCDC136Q96JN2 1154 aa15.77■□□□□ 0.11
PCCB-214ENST00000478469 SYCP2Q9BX26 1530 aa15.76■□□□□ 0.11
PCCB-214ENST00000478469 NPM2Q86SE8 214 aaKnown RBP15.76■□□□□ 0.11
PCCB-214ENST00000478469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.76■□□□□ 0.11
PCCB-214ENST00000478469 U2AF1L5P0DN76 240 aaPredicted RBP15.75■□□□□ 0.11
PCCB-214ENST00000478469 U2AF1Q01081 240 aaKnown RBP eCLIP15.75■□□□□ 0.11
PCCB-214ENST00000478469 RPGRIP1LQ68CZ1 1315 aa15.75■□□□□ 0.11
PCCB-214ENST00000478469 IRX6P78412 446 aaPredicted RBP15.75■□□□□ 0.11
PCCB-214ENST00000478469 LAS1LQ9Y4W2 734 aaKnown RBP15.75■□□□□ 0.11
PCCB-214ENST00000478469 TRAPPC8Q9Y2L5 1435 aa15.75■□□□□ 0.11
PCCB-214ENST00000478469 ZNF518AQ6AHZ1 1483 aa15.74■□□□□ 0.11
PCCB-214ENST00000478469 ERBINQ96RT1 1412 aa15.74■□□□□ 0.11
PCCB-214ENST00000478469 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
PCCB-214ENST00000478469 KIF7Q2M1P5 1343 aa15.73■□□□□ 0.11
PCCB-214ENST00000478469 TCOF1Q13428 1488 aaKnown RBP15.73■□□□□ 0.11
PCCB-214ENST00000478469 AEBP2Q6ZN18 517 aaPredicted RBP15.73■□□□□ 0.11
PCCB-214ENST00000478469 CCDC7Q96M83 1385 aa15.72■□□□□ 0.11
PCCB-214ENST00000478469 CGNL1Q0VF96 1302 aa15.72■□□□□ 0.11
PCCB-214ENST00000478469 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
PCCB-214ENST00000478469 SUPT16HQ9Y5B9 1047 aaKnown RBP15.7■□□□□ 0.1
PCCB-214ENST00000478469 ABCC10Q5T3U5 1492 aa15.7■□□□□ 0.1
PCCB-214ENST00000478469 FBXO31Q5XUX0 539 aaPredicted RBP15.69■□□□□ 0.1
PCCB-214ENST00000478469 IDI1Q13907 227 aa15.69■□□□□ 0.1
PCCB-214ENST00000478469 A2MP01023 1474 aa15.69■□□□□ 0.1
PCCB-214ENST00000478469 MYBBP1AQ9BQG0 1328 aaKnown RBP15.68■□□□□ 0.1
PCCB-214ENST00000478469 KDM5BQ9UGL1 1544 aa15.68■□□□□ 0.1
PCCB-214ENST00000478469 DUOX2Q9NRD8 1548 aa15.68■□□□□ 0.1
PCCB-214ENST00000478469 ANKLE2Q86XL3 938 aa15.67■□□□□ 0.1
PCCB-214ENST00000478469 CEBPAP49715 358 aaPredicted RBP15.67■□□□□ 0.1
PCCB-214ENST00000478469 COG3Q96JB2 828 aa15.67■□□□□ 0.1
PCCB-214ENST00000478469 AMPHP49418 695 aa15.66■□□□□ 0.1
PCCB-214ENST00000478469 PRAM1Q96QH2 718 aa15.66■□□□□ 0.1
PCCB-214ENST00000478469 SLC26A8Q96RN1 970 aa15.66■□□□□ 0.1
PCCB-214ENST00000478469 WASHC2AQ641Q2 1341 aa15.66■□□□□ 0.1
PCCB-214ENST00000478469 CSB-PGBD3P0DP91 1061 aa15.66■□□□□ 0.1
PCCB-214ENST00000478469 CABP2Q9NPB3 220 aa15.66■□□□□ 0.1
PCCB-214ENST00000478469 ABCA8O94911 1581 aa15.66■□□□□ 0.1
PCCB-214ENST00000478469 UHRF1BP1LA0JNW5 1464 aa15.65■□□□□ 0.1
PCCB-214ENST00000478469 RTF1Q92541 710 aaKnown RBP15.64■□□□□ 0.09
PCCB-214ENST00000478469 ERCC6L2Q5T890 1561 aa15.64■□□□□ 0.09
PCCB-214ENST00000478469 RTEL1-TNFRSF6BF6WH68 1400 aa15.63■□□□□ 0.09
PCCB-214ENST00000478469 SHANK2Q9UPX8 1470 aa15.63■□□□□ 0.09
PCCB-214ENST00000478469 MYT1Q01538 1121 aa15.63■□□□□ 0.09
PCCB-214ENST00000478469 MYH16Q9H6N6 1097 aa15.62■□□□□ 0.09
PCCB-214ENST00000478469 FTSJ3Q8IY81 847 aaKnown RBP15.62■□□□□ 0.09
PCCB-214ENST00000478469 MAGI3Q5TCQ9 1506 aa15.62■□□□□ 0.09
PCCB-214ENST00000478469 RPRD2Q5VT52 1461 aaKnown RBP15.62■□□□□ 0.09
PCCB-214ENST00000478469 ATF3P18847 181 aa15.61■□□□□ 0.09
PCCB-214ENST00000478469 PSME1Q06323 249 aa15.61■□□□□ 0.09
PCCB-214ENST00000478469 FRAT1Q92837 279 aaPredicted RBP15.61■□□□□ 0.09
PCCB-214ENST00000478469 PROSER2Q86WR7 435 aaPredicted RBP15.6■□□□□ 0.09
PCCB-214ENST00000478469 LTV1Q96GA3 475 aaPredicted RBP15.59■□□□□ 0.09
PCCB-214ENST00000478469 ARXQ96QS3 562 aa15.58■□□□□ 0.09
PCCB-214ENST00000478469 CALD1Q05682 793 aaKnown RBP15.58■□□□□ 0.08
PCCB-214ENST00000478469 CNTLNQ9NXG0 1405 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms