RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 RIMBP3BA6NNM3 1639 aa17.44■□□□□ 0.38
TRAF3IP3-213ENST00000478359 EIF2AK4Q9P2K8 1649 aaKnown RBP17.44■□□□□ 0.38
TRAF3IP3-213ENST00000478359 RIMBP3Q9UFD9 1639 aa17.44■□□□□ 0.38
TRAF3IP3-213ENST00000478359 DEPDC5O75140 1603 aa17.43■□□□□ 0.38
TRAF3IP3-213ENST00000478359 WASHC2AQ641Q2 1341 aa17.42■□□□□ 0.38
TRAF3IP3-213ENST00000478359 SCAPERQ9BY12 1400 aa17.41■□□□□ 0.38
TRAF3IP3-213ENST00000478359 ARID4BQ4LE39 1312 aaPredicted RBP17.41■□□□□ 0.38
TRAF3IP3-213ENST00000478359 ZNF518AQ6AHZ1 1483 aa17.4■□□□□ 0.38
TRAF3IP3-213ENST00000478359 CCDC7Q96M83 1385 aa17.4■□□□□ 0.38
TRAF3IP3-213ENST00000478359 AFAP1Q8N556 730 aa17.39■□□□□ 0.38
TRAF3IP3-213ENST00000478359 CNTLNQ9NXG0 1405 aa17.39■□□□□ 0.37
TRAF3IP3-213ENST00000478359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRAF3IP3-213ENST00000478359 KDM5CP41229 1560 aa17.38■□□□□ 0.37
TRAF3IP3-213ENST00000478359 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
TRAF3IP3-213ENST00000478359 KANK1Q14678 1352 aa17.38■□□□□ 0.37
TRAF3IP3-213ENST00000478359 USP47Q96K76 1375 aa17.37■□□□□ 0.37
TRAF3IP3-213ENST00000478359 CD109Q6YHK3 1445 aa17.36■□□□□ 0.37
TRAF3IP3-213ENST00000478359 PLA2R1Q13018 1463 aa17.36■□□□□ 0.37
TRAF3IP3-213ENST00000478359 DHX29Q7Z478 1369 aaKnown RBP17.36■□□□□ 0.37
TRAF3IP3-213ENST00000478359 TET3O43151 1660 aa17.36■□□□□ 0.37
TRAF3IP3-213ENST00000478359 VWDEQ8N2E2 1590 aa17.34■□□□□ 0.37
TRAF3IP3-213ENST00000478359 DCAF11Q8TEB1 546 aa17.34■□□□□ 0.37
TRAF3IP3-213ENST00000478359 PRDM15P57071 1507 aaPredicted RBP17.33■□□□□ 0.37
TRAF3IP3-213ENST00000478359 STAC3Q96MF2 364 aa17.33■□□□□ 0.37
TRAF3IP3-213ENST00000478359 NEO1Q92859 1461 aa17.33■□□□□ 0.36
TRAF3IP3-213ENST00000478359 ZNF326Q5BKZ1 582 aaKnown RBP17.33■□□□□ 0.36
TRAF3IP3-213ENST00000478359 DNAJC5Q9H3Z4 198 aa17.33■□□□□ 0.36
TRAF3IP3-213ENST00000478359 E9PCH4 1651 aa17.32■□□□□ 0.36
TRAF3IP3-213ENST00000478359 LAMC1P11047 1609 aa17.32■□□□□ 0.36
TRAF3IP3-213ENST00000478359 TRPM2O94759 1503 aa17.32■□□□□ 0.36
TRAF3IP3-213ENST00000478359 KIDINS220Q9ULH0 1771 aa17.32■□□□□ 0.36
TRAF3IP3-213ENST00000478359 PRAG1Q86YV5 1406 aa17.32■□□□□ 0.36
TRAF3IP3-213ENST00000478359 TRPM1Q7Z4N2 1603 aa17.31■□□□□ 0.36
TRAF3IP3-213ENST00000478359 CARD11Q9BXL7 1154 aa17.31■□□□□ 0.36
TRAF3IP3-213ENST00000478359 ROCK2O75116 1388 aaKnown RBP17.31■□□□□ 0.36
TRAF3IP3-213ENST00000478359 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
TRAF3IP3-213ENST00000478359 SPHKAPQ2M3C7 1700 aa17.3■□□□□ 0.36
TRAF3IP3-213ENST00000478359 MLH3Q9UHC1 1453 aa17.3■□□□□ 0.36
TRAF3IP3-213ENST00000478359 POGZQ7Z3K3 1410 aa17.3■□□□□ 0.36
TRAF3IP3-213ENST00000478359 KIF7Q2M1P5 1343 aa17.3■□□□□ 0.36
TRAF3IP3-213ENST00000478359 PTPRTO14522 1441 aa17.3■□□□□ 0.36
TRAF3IP3-213ENST00000478359 NEURL4Q96JN8 1562 aa17.3■□□□□ 0.36
TRAF3IP3-213ENST00000478359 MYT1LQ9UL68 1186 aa17.29■□□□□ 0.36
TRAF3IP3-213ENST00000478359 A2MP01023 1474 aa17.29■□□□□ 0.36
TRAF3IP3-213ENST00000478359 HECW2Q9P2P5 1572 aa17.28■□□□□ 0.36
TRAF3IP3-213ENST00000478359 CEP152O94986 1710 aa17.27■□□□□ 0.36
TRAF3IP3-213ENST00000478359 KDM2AQ9Y2K7 1162 aa17.27■□□□□ 0.36
TRAF3IP3-213ENST00000478359 GPRASP1Q5JY77 1395 aa17.27■□□□□ 0.36
TRAF3IP3-213ENST00000478359 C11orf95C9JLR9 678 aaPredicted RBP17.27■□□□□ 0.35
TRAF3IP3-213ENST00000478359 RNF17Q9BXT8 1623 aaKnown RBP17.26■□□□□ 0.35
TRAF3IP3-213ENST00000478359 BCORL1Q5H9F3 1711 aa17.26■□□□□ 0.35
TRAF3IP3-213ENST00000478359 LMTK2Q8IWU2 1503 aa17.25■□□□□ 0.35
TRAF3IP3-213ENST00000478359 KIF3BO15066 747 aa17.25■□□□□ 0.35
TRAF3IP3-213ENST00000478359 MROH1Q8NDA8 1641 aa17.25■□□□□ 0.35
TRAF3IP3-213ENST00000478359 GLI2P10070 1586 aa17.25■□□□□ 0.35
TRAF3IP3-213ENST00000478359 MAP3K4Q9Y6R4 1608 aa17.23■□□□□ 0.35
TRAF3IP3-213ENST00000478359 RGL3Q3MIN7 710 aa17.22■□□□□ 0.35
TRAF3IP3-213ENST00000478359 EFCAB6Q5THR3 1501 aa17.22■□□□□ 0.35
TRAF3IP3-213ENST00000478359 PRKRIP1Q9H875 184 aaPredicted RBP17.21■□□□□ 0.35
TRAF3IP3-213ENST00000478359 CLTCL1P53675 1640 aa17.19■□□□□ 0.34
TRAF3IP3-213ENST00000478359 ST20-MTHFSA0A0A6YYL1 179 aa17.18■□□□□ 0.34
TRAF3IP3-213ENST00000478359 MADDQ8WXG6 1647 aa17.16■□□□□ 0.34
TRAF3IP3-213ENST00000478359 ABCA6Q8N139 1617 aa17.16■□□□□ 0.34
TRAF3IP3-213ENST00000478359 FRMPD1Q5SYB0 1578 aa17.16■□□□□ 0.34
TRAF3IP3-213ENST00000478359 KTN1Q86UP2 1357 aaKnown RBP17.16■□□□□ 0.34
TRAF3IP3-213ENST00000478359 KIF1BO60333 1816 aa17.15■□□□□ 0.34
TRAF3IP3-213ENST00000478359 KIAA1210Q9ULL0 1709 aa17.15■□□□□ 0.34
TRAF3IP3-213ENST00000478359 PPRC1Q5VV67 1664 aaKnown RBP17.15■□□□□ 0.34
TRAF3IP3-213ENST00000478359 RICTORQ6R327 1708 aa17.14■□□□□ 0.34
TRAF3IP3-213ENST00000478359 MYOM2P54296 1465 aa17.12■□□□□ 0.33
TRAF3IP3-213ENST00000478359 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
TRAF3IP3-213ENST00000478359 ZC3H13Q5T200 1668 aaKnown RBP17.11■□□□□ 0.33
TRAF3IP3-213ENST00000478359 NBPF1Q3BBV0 1214 aa17.1■□□□□ 0.33
TRAF3IP3-213ENST00000478359 COL17A1Q9UMD9 1497 aaPredicted RBP17.1■□□□□ 0.33
TRAF3IP3-213ENST00000478359 SLC24A1O60721 1099 aa17.1■□□□□ 0.33
TRAF3IP3-213ENST00000478359 DIP2BQ9P265 1576 aa17.09■□□□□ 0.33
TRAF3IP3-213ENST00000478359 IQGAP1P46940 1657 aa17.09■□□□□ 0.33
TRAF3IP3-213ENST00000478359 ZMYM4Q5VZL5 1548 aa17.08■□□□□ 0.33
TRAF3IP3-213ENST00000478359 POLR3GLQ9BT43 218 aa17.08■□□□□ 0.33
TRAF3IP3-213ENST00000478359 IFT172Q9UG01 1749 aa17.07■□□□□ 0.32
TRAF3IP3-213ENST00000478359 ABCC3O15438 1527 aa17.07■□□□□ 0.32
TRAF3IP3-213ENST00000478359 EIF3AQ14152 1382 aaKnown RBP17.07■□□□□ 0.32
TRAF3IP3-213ENST00000478359 TMF1P82094 1093 aa17.07■□□□□ 0.32
TRAF3IP3-213ENST00000478359 MRS2Q9HD23 443 aa17.07■□□□□ 0.32
TRAF3IP3-213ENST00000478359 SCAF11Q99590 1463 aaKnown RBP17.06■□□□□ 0.32
TRAF3IP3-213ENST00000478359 CAMSAP1Q5T5Y3 1602 aa17.06■□□□□ 0.32
TRAF3IP3-213ENST00000478359 WASHC2CQ9Y4E1 1318 aa17.06■□□□□ 0.32
TRAF3IP3-213ENST00000478359 NPATQ14207 1427 aa17.05■□□□□ 0.32
TRAF3IP3-213ENST00000478359 ADGRB3O60242 1522 aa17.05■□□□□ 0.32
TRAF3IP3-213ENST00000478359 ARHGAP31Q2M1Z3 1444 aa17.05■□□□□ 0.32
TRAF3IP3-213ENST00000478359 RAPGEF3O95398 923 aa17.05■□□□□ 0.32
TRAF3IP3-213ENST00000478359 CDCA8Q53HL2 280 aa17.05■□□□□ 0.32
TRAF3IP3-213ENST00000478359 TESK2Q96S53 571 aa17.05■□□□□ 0.32
TRAF3IP3-213ENST00000478359 RALBP1Q15311 655 aa17.04■□□□□ 0.32
TRAF3IP3-213ENST00000478359 GGT6Q6P531 493 aa17.04■□□□□ 0.32
TRAF3IP3-213ENST00000478359 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRAF3IP3-213ENST00000478359 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
TRAF3IP3-213ENST00000478359 NRXN1Q9ULB1 1477 aa17.02■□□□□ 0.32
TRAF3IP3-213ENST00000478359 FAM69CQ0P6D2 419 aa17.01■□□□□ 0.31
TRAF3IP3-213ENST00000478359 UGGT1Q9NYU2 1555 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms