RNA–Protein interactions for RNA: ENST00000478152.1

CAB39-204, Transcript of calcium binding protein 39, humanhuman

TSL 2

Gene CAB39, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-204ENST00000478152 MINK1Q8N4C8 1332 aaPredicted RBP12.52□□□□□ -0.41
CAB39-204ENST00000478152 SNPHO15079 494 aa12.51□□□□□ -0.41
CAB39-204ENST00000478152 LHX8Q68G74 356 aa12.51□□□□□ -0.41
CAB39-204ENST00000478152 IRF6O14896 467 aa12.5□□□□□ -0.41
CAB39-204ENST00000478152 ZDHHC16Q969W1 377 aa12.5□□□□□ -0.41
CAB39-204ENST00000478152 CCDC102AQ96A19 550 aa12.5□□□□□ -0.41
CAB39-204ENST00000478152 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
CAB39-204ENST00000478152 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
CAB39-204ENST00000478152 C6orf132Q5T0Z8 1188 aa12.48□□□□□ -0.41
CAB39-204ENST00000478152 PDE4DQ08499 809 aa12.46□□□□□ -0.41
CAB39-204ENST00000478152 GPBP1L1Q9HC44 474 aaPredicted RBP12.46□□□□□ -0.41
CAB39-204ENST00000478152 TMEM132AQ24JP5 1023 aa12.44□□□□□ -0.42
CAB39-204ENST00000478152 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
CAB39-204ENST00000478152 KDM4CQ9H3R0 1056 aa12.39□□□□□ -0.43
CAB39-204ENST00000478152 PSDA5PKW4 1024 aaPredicted RBP12.38□□□□□ -0.43
CAB39-204ENST00000478152 AMHR2Q16671 573 aa12.38□□□□□ -0.43
CAB39-204ENST00000478152 PADI6Q6TGC4 694 aa12.38□□□□□ -0.43
CAB39-204ENST00000478152 CERKQ8TCT0 537 aa12.38□□□□□ -0.43
CAB39-204ENST00000478152 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
CAB39-204ENST00000478152 COL9A1P20849 921 aa12.37□□□□□ -0.43
CAB39-204ENST00000478152 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
CAB39-204ENST00000478152 TTC13Q8NBP0 860 aa12.36□□□□□ -0.43
CAB39-204ENST00000478152 PARP9Q8IXQ6 854 aa12.35□□□□□ -0.43
CAB39-204ENST00000478152 PHOX2BQ99453 314 aa12.34□□□□□ -0.43
CAB39-204ENST00000478152 PRSS12P56730 875 aa12.33□□□□□ -0.44
CAB39-204ENST00000478152 CDCA7LQ96GN5 454 aa12.33□□□□□ -0.44
CAB39-204ENST00000478152 ST18O60284 1047 aa12.32□□□□□ -0.44
CAB39-204ENST00000478152 RBM27Q9P2N5 1060 aaKnown RBP12.32□□□□□ -0.44
CAB39-204ENST00000478152 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
CAB39-204ENST00000478152 PTPREP23469 700 aa12.31□□□□□ -0.44
CAB39-204ENST00000478152 REPIN1Q9BWE0 567 aaKnown RBP12.31□□□□□ -0.44
CAB39-204ENST00000478152 ADGRG1Q9Y653 693 aa12.31□□□□□ -0.44
CAB39-204ENST00000478152 IL27Q8NEV9 243 aa12.3□□□□□ -0.44
CAB39-204ENST00000478152 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
CAB39-204ENST00000478152 TTLL12Q14166 644 aaPredicted RBP12.28□□□□□ -0.44
CAB39-204ENST00000478152 METTL3Q86U44 580 aaKnown RBP12.28□□□□□ -0.44
CAB39-204ENST00000478152 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
CAB39-204ENST00000478152 VARS2Q5ST30 1063 aaKnown RBP12.27□□□□□ -0.45
CAB39-204ENST00000478152 PXYLP1Q8TE99 480 aa12.27□□□□□ -0.45
CAB39-204ENST00000478152 NLRP7Q8WX94 980 aa12.27□□□□□ -0.45
CAB39-204ENST00000478152 KCNK17Q96T54 332 aa12.27□□□□□ -0.45
CAB39-204ENST00000478152 TMUB1Q9BVT8 246 aa12.27□□□□□ -0.45
CAB39-204ENST00000478152 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
CAB39-204ENST00000478152 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
CAB39-204ENST00000478152 OATP04181 439 aa12.26□□□□□ -0.45
CAB39-204ENST00000478152 MARVELD3Q96A59 401 aa12.26□□□□□ -0.45
CAB39-204ENST00000478152 ERBB3P21860 1342 aa12.26□□□□□ -0.45
CAB39-204ENST00000478152 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
CAB39-204ENST00000478152 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
CAB39-204ENST00000478152 MDM2Q00987 491 aaPredicted RBP12.24□□□□□ -0.45
CAB39-204ENST00000478152 POTEEQ6S8J3 1075 aa12.24□□□□□ -0.45
CAB39-204ENST00000478152 PLEKHG3A1L390 1219 aa12.23□□□□□ -0.45
CAB39-204ENST00000478152 MS4A1P11836 297 aa12.23□□□□□ -0.45
CAB39-204ENST00000478152 PSEN2P49810 448 aa12.23□□□□□ -0.45
CAB39-204ENST00000478152 EMP3P54852 163 aa12.22□□□□□ -0.45
CAB39-204ENST00000478152 PROX2Q3B8N5 592 aa12.22□□□□□ -0.45
CAB39-204ENST00000478152 TRIM6-TRIM34B2RNG4 842 aa12.21□□□□□ -0.45
CAB39-204ENST00000478152 CLCN1P35523 988 aa12.21□□□□□ -0.45
CAB39-204ENST00000478152 FAM163AQ96GL9 167 aaPredicted RBP12.21□□□□□ -0.45
CAB39-204ENST00000478152 GPCPD1Q9NPB8 672 aa12.21□□□□□ -0.45
CAB39-204ENST00000478152 EYA1Q99502 592 aa12.2□□□□□ -0.46
CAB39-204ENST00000478152 NUDT18Q6ZVK8 323 aa12.19□□□□□ -0.46
CAB39-204ENST00000478152 RBM46Q8TBY0 533 aaKnown RBP12.19□□□□□ -0.46
CAB39-204ENST00000478152 AXIN2Q9Y2T1 843 aa12.19□□□□□ -0.46
CAB39-204ENST00000478152 FAM205CA6NFA0 338 aa12.18□□□□□ -0.46
CAB39-204ENST00000478152 LCE2DQ5TA82 110 aaPredicted RBP12.18□□□□□ -0.46
CAB39-204ENST00000478152 ZBED2Q9BTP6 218 aa12.18□□□□□ -0.46
CAB39-204ENST00000478152 POTEB3A0JP26 581 aa12.17□□□□□ -0.46
CAB39-204ENST00000478152 ARHGAP33O14559 1287 aa12.17□□□□□ -0.46
CAB39-204ENST00000478152 POTEBQ6S5H4 581 aa12.17□□□□□ -0.46
CAB39-204ENST00000478152 DDRGK1Q96HY6 314 aa12.17□□□□□ -0.46
CAB39-204ENST00000478152 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
CAB39-204ENST00000478152 TATDN2Q93075 761 aa12.16□□□□□ -0.46
CAB39-204ENST00000478152 KCNH8Q96L42 1107 aa12.16□□□□□ -0.46
CAB39-204ENST00000478152 RCCD1A6NED2 376 aa12.15□□□□□ -0.46
CAB39-204ENST00000478152 SMAPO00193 183 aa12.15□□□□□ -0.46
CAB39-204ENST00000478152 SSTR3P32745 418 aaPredicted RBP12.15□□□□□ -0.46
CAB39-204ENST00000478152 PACS2Q86VP3 889 aa12.15□□□□□ -0.46
CAB39-204ENST00000478152 FAM217BQ9NTX9 383 aaPredicted RBP12.15□□□□□ -0.46
CAB39-204ENST00000478152 DAXXQ9UER7 740 aaPredicted RBP12.15□□□□□ -0.46
CAB39-204ENST00000478152 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
CAB39-204ENST00000478152 NBPF26B4DH59 902 aa12.14□□□□□ -0.47
CAB39-204ENST00000478152 ONECUT3O60422 494 aaPredicted RBP12.14□□□□□ -0.47
CAB39-204ENST00000478152 ZNF687Q8N1G0 1237 aa12.14□□□□□ -0.47
CAB39-204ENST00000478152 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
CAB39-204ENST00000478152 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.12□□□□□ -0.47
CAB39-204ENST00000478152 HS3ST6Q96QI5 342 aa12.12□□□□□ -0.47
CAB39-204ENST00000478152 PBX2P40425 430 aa12.1□□□□□ -0.47
CAB39-204ENST00000478152 SLC4A5Q9BY07 1137 aa12.1□□□□□ -0.47
CAB39-204ENST00000478152 DNAJB2P25686 324 aa12.08□□□□□ -0.48
CAB39-204ENST00000478152 BEGAINQ9BUH8 593 aa12.08□□□□□ -0.48
CAB39-204ENST00000478152 TMEM134Q9H6X4 195 aa12.07□□□□□ -0.48
CAB39-204ENST00000478152 RABGEF1Q9UJ41 708 aa12.07□□□□□ -0.48
CAB39-204ENST00000478152 VPS9D1Q9Y2B5 631 aa12.07□□□□□ -0.48
CAB39-204ENST00000478152 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
CAB39-204ENST00000478152 TIMELESSQ9UNS1 1208 aa12.05□□□□□ -0.48
CAB39-204ENST00000478152 GOPCQ9HD26 462 aa12.02□□□□□ -0.49
CAB39-204ENST00000478152 CD46P15529 392 aa12.01□□□□□ -0.49
CAB39-204ENST00000478152 DDX11L8A8MPP1 907 aa12□□□□□ -0.49
CAB39-204ENST00000478152 SH3D19Q5HYK7 790 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms