RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 JPH4Q96JJ6 628 aa8.28□□□□□ -1.08
SF3B6-202ENST00000478050 EVI5O60447 810 aa8.27□□□□□ -1.09
SF3B6-202ENST00000478050 CRISPLD2Q9H0B8 497 aa8.27□□□□□ -1.09
SF3B6-202ENST00000478050 SCRIBQ14160 1630 aa8.27□□□□□ -1.09
SF3B6-202ENST00000478050 PDE4AP27815 886 aa8.26□□□□□ -1.09
SF3B6-202ENST00000478050 ADAM33Q9BZ11 813 aa8.26□□□□□ -1.09
SF3B6-202ENST00000478050 ANO8Q9HCE9 1232 aaPredicted RBP8.26□□□□□ -1.09
SF3B6-202ENST00000478050 ANKK1Q8NFD2 765 aa8.25□□□□□ -1.09
SF3B6-202ENST00000478050 MAP3K9P80192 1104 aa8.24□□□□□ -1.09
SF3B6-202ENST00000478050 Q6ZNB5 142 aa8.22□□□□□ -1.09
SF3B6-202ENST00000478050 RABGEF1Q9UJ41 708 aa8.21□□□□□ -1.1
SF3B6-202ENST00000478050 PPP1R3GB7ZBB8 358 aa8.19□□□□□ -1.1
SF3B6-202ENST00000478050 ITGBL1O95965 494 aaPredicted RBP8.19□□□□□ -1.1
SF3B6-202ENST00000478050 NKX1-1Q15270 411 aaPredicted RBP8.19□□□□□ -1.1
SF3B6-202ENST00000478050 LARP6Q9BRS8 491 aaKnown RBP8.19□□□□□ -1.1
SF3B6-202ENST00000478050 NCKAP5LQ9HCH0 1330 aa8.19□□□□□ -1.1
SF3B6-202ENST00000478050 BCAMP50895 628 aa8.18□□□□□ -1.1
SF3B6-202ENST00000478050 PROX2Q3B8N5 592 aa8.18□□□□□ -1.1
SF3B6-202ENST00000478050 DDX27Q96GQ7 796 aaKnown RBP8.18□□□□□ -1.1
SF3B6-202ENST00000478050 NYAP1Q6ZVC0 841 aa8.17□□□□□ -1.1
SF3B6-202ENST00000478050 SOWAHBA6NEL2 793 aa8.16□□□□□ -1.1
SF3B6-202ENST00000478050 KCNC4Q03721 635 aa8.16□□□□□ -1.1
SF3B6-202ENST00000478050 LAPTM4BQ86VI4 370 aa8.16□□□□□ -1.1
SF3B6-202ENST00000478050 COL9A1P20849 921 aa8.15□□□□□ -1.1
SF3B6-202ENST00000478050 FBXW7Q969H0 707 aa8.15□□□□□ -1.1
SF3B6-202ENST00000478050 PCDHGA10Q9Y5H3 936 aa8.15□□□□□ -1.1
SF3B6-202ENST00000478050 RSF1Q96T23 1441 aaPredicted RBP8.14□□□□□ -1.11
SF3B6-202ENST00000478050 TYW1BQ6NUM6 668 aa8.14□□□□□ -1.11
SF3B6-202ENST00000478050 ZFRQ96KR1 1074 aaKnown RBP8.14□□□□□ -1.11
SF3B6-202ENST00000478050 KIAA1468Q9P260 1216 aa8.14□□□□□ -1.11
SF3B6-202ENST00000478050 WBP1LQ9NX94 342 aa8.13□□□□□ -1.11
SF3B6-202ENST00000478050 PHF14O94880 888 aa8.11□□□□□ -1.11
SF3B6-202ENST00000478050 LAPTM4AQ15012 233 aa8.11□□□□□ -1.11
SF3B6-202ENST00000478050 SEPT9Q9UHD8 586 aaPredicted RBP8.1□□□□□ -1.11
SF3B6-202ENST00000478050 THOC2Q8NI27 1593 aaKnown RBP8.1□□□□□ -1.11
SF3B6-202ENST00000478050 ONECUT3O60422 494 aaPredicted RBP8.09□□□□□ -1.11
SF3B6-202ENST00000478050 EMILIN3Q9NT22 766 aa8.09□□□□□ -1.11
SF3B6-202ENST00000478050 MFSD10Q14728 455 aa8.08□□□□□ -1.12
SF3B6-202ENST00000478050 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.08□□□□□ -1.12
SF3B6-202ENST00000478050 BAZ1AQ9NRL2 1556 aaPredicted RBP8.08□□□□□ -1.12
SF3B6-202ENST00000478050 GFRA3O60609 400 aa8.07□□□□□ -1.12
SF3B6-202ENST00000478050 C6orf132Q5T0Z8 1188 aa8.07□□□□□ -1.12
SF3B6-202ENST00000478050 LRCH3Q96II8 777 aa8.07□□□□□ -1.12
SF3B6-202ENST00000478050 EPAS1Q99814 870 aa8.07□□□□□ -1.12
SF3B6-202ENST00000478050 TSR3Q9UJK0 312 aaKnown RBP8.07□□□□□ -1.12
SF3B6-202ENST00000478050 HPS5Q9UPZ3 1129 aa8.07□□□□□ -1.12
SF3B6-202ENST00000478050 RIMBP3CA6NJZ7 1639 aa8.07□□□□□ -1.12
SF3B6-202ENST00000478050 RIMBP3BA6NNM3 1639 aa8.07□□□□□ -1.12
SF3B6-202ENST00000478050 RIMBP3Q9UFD9 1639 aa8.07□□□□□ -1.12
SF3B6-202ENST00000478050 GTPBP6O43824 516 aaPredicted RBP8.06□□□□□ -1.12
SF3B6-202ENST00000478050 FAM98CQ17RN3 349 aaKnown RBP8.06□□□□□ -1.12
SF3B6-202ENST00000478050 TRIM6-TRIM34B2RNG4 842 aa8.05□□□□□ -1.12
SF3B6-202ENST00000478050 TRAF7Q6Q0C0 670 aa8.05□□□□□ -1.12
SF3B6-202ENST00000478050 RBM33Q96EV2 1170 aaKnown RBP8.04□□□□□ -1.12
SF3B6-202ENST00000478050 MROH2BQ7Z745 1585 aa8.03□□□□□ -1.12
SF3B6-202ENST00000478050 NESP48681 1621 aa8.03□□□□□ -1.12
SF3B6-202ENST00000478050 SMARCA2P51531 1590 aa8.02□□□□□ -1.13
SF3B6-202ENST00000478050 PPP4CP60510 307 aa8.02□□□□□ -1.13
SF3B6-202ENST00000478050 CYB5RLQ6IPT4 315 aa8.02□□□□□ -1.13
SF3B6-202ENST00000478050 WIZO95785 1651 aa8.02□□□□□ -1.13
SF3B6-202ENST00000478050 PACS2Q86VP3 889 aa8.01□□□□□ -1.13
SF3B6-202ENST00000478050 PRKD2Q9BZL6 878 aa8□□□□□ -1.13
SF3B6-202ENST00000478050 ARHGEF11O15085 1522 aa7.98□□□□□ -1.13
SF3B6-202ENST00000478050 DPYSL4O14531 572 aa7.98□□□□□ -1.13
SF3B6-202ENST00000478050 DDX12PQ92771 950 aa7.98□□□□□ -1.13
SF3B6-202ENST00000478050 NRG2O14511 850 aaPredicted RBP7.96□□□□□ -1.14
SF3B6-202ENST00000478050 SMARCA4P51532 1647 aa7.96□□□□□ -1.14
SF3B6-202ENST00000478050 LCE2BO14633 110 aa7.95□□□□□ -1.14
SF3B6-202ENST00000478050 MAP3K7O43318 606 aa7.95□□□□□ -1.14
SF3B6-202ENST00000478050 TJAP1Q5JTD0 557 aa7.95□□□□□ -1.14
SF3B6-202ENST00000478050 CADPS2Q86UW7 1296 aa7.95□□□□□ -1.14
SF3B6-202ENST00000478050 NCAPD3P42695 1498 aa7.94□□□□□ -1.14
SF3B6-202ENST00000478050 IL21Q9HBE4 155 aa7.94□□□□□ -1.14
SF3B6-202ENST00000478050 TSKSQ9UJT2 592 aa7.94□□□□□ -1.14
SF3B6-202ENST00000478050 PDS5BQ9NTI5 1447 aa7.94□□□□□ -1.14
SF3B6-202ENST00000478050 TOP2AP11388 1531 aaKnown RBP7.93□□□□□ -1.14
SF3B6-202ENST00000478050 CAMK2BQ13554 666 aa7.93□□□□□ -1.14
SF3B6-202ENST00000478050 NBR1Q14596 966 aa7.93□□□□□ -1.14
SF3B6-202ENST00000478050 SAMD7Q7Z3H4 446 aa7.93□□□□□ -1.14
SF3B6-202ENST00000478050 V9GY48 417 aaPredicted RBP7.93□□□□□ -1.14
SF3B6-202ENST00000478050 HDGFP51858 240 aaKnown RBP7.92□□□□□ -1.14
SF3B6-202ENST00000478050 ZNF787Q6DD87 383 aa7.92□□□□□ -1.14
SF3B6-202ENST00000478050 PPP1R18Q6NYC8 613 aa7.92□□□□□ -1.14
SF3B6-202ENST00000478050 MTRQ99707 1265 aa7.92□□□□□ -1.14
SF3B6-202ENST00000478050 LOC105371045A0A1W2PR82 267 aa7.91□□□□□ -1.14
SF3B6-202ENST00000478050 SMAPO00193 183 aa7.91□□□□□ -1.14
SF3B6-202ENST00000478050 HRCP23327 699 aa7.91□□□□□ -1.14
SF3B6-202ENST00000478050 EN1Q05925 392 aaPredicted RBP7.91□□□□□ -1.14
SF3B6-202ENST00000478050 TSR1Q2NL82 804 aaKnown RBP7.9□□□□□ -1.14
SF3B6-202ENST00000478050 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.9□□□□□ -1.14
SF3B6-202ENST00000478050 LAMC3Q9Y6N6 1575 aa7.89□□□□□ -1.15
SF3B6-202ENST00000478050 RNF40O75150 1001 aa7.89□□□□□ -1.15
SF3B6-202ENST00000478050 CDCA7LQ96GN5 454 aa7.89□□□□□ -1.15
SF3B6-202ENST00000478050 PDZRN3Q9UPQ7 1066 aa7.89□□□□□ -1.15
SF3B6-202ENST00000478050 LMTK3Q96Q04 1460 aa7.88□□□□□ -1.15
SF3B6-202ENST00000478050 GGCXP38435 758 aa7.88□□□□□ -1.15
SF3B6-202ENST00000478050 PRSS12P56730 875 aa7.88□□□□□ -1.15
SF3B6-202ENST00000478050 KIF21AQ7Z4S6 1674 aa7.88□□□□□ -1.15
SF3B6-202ENST00000478050 MRC2Q9UBG0 1479 aa7.87□□□□□ -1.15
SF3B6-202ENST00000478050 NBPF26B4DH59 902 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms