RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	ERBB3	P21860	1342 aa		7.55	□□□□□ -1.2
TARDBP-208	ENST00000477447	ZMYND10	O75800	440 aa		7.55	□□□□□ -1.2
TARDBP-208	ENST00000477447	VARS2	Q5ST30	1063 aa	Known RBP	7.54	□□□□□ -1.2
TARDBP-208	ENST00000477447	PTGDR	Q13258	359 aa		7.53	□□□□□ -1.2
TARDBP-208	ENST00000477447	HIC1	Q14526	733 aa		7.53	□□□□□ -1.2
TARDBP-208	ENST00000477447	C6orf132	Q5T0Z8	1188 aa		7.53	□□□□□ -1.2
TARDBP-208	ENST00000477447	GNPAT	O15228	680 aa		7.52	□□□□□ -1.21
TARDBP-208	ENST00000477447	BARGIN	Q6ZT62	677 aa		7.52	□□□□□ -1.21
TARDBP-208	ENST00000477447	BCL2L12	Q9HB09	334 aa		7.52	□□□□□ -1.21
TARDBP-208	ENST00000477447	SLC24A3	Q9HC58	644 aa		7.52	□□□□□ -1.21
TARDBP-208	ENST00000477447	FAM205C	A6NFA0	338 aa		7.51	□□□□□ -1.21
TARDBP-208	ENST00000477447	LCE2D	Q5TA82	110 aa	Predicted RBP	7.51	□□□□□ -1.21
TARDBP-208	ENST00000477447	KRI1	Q8N9T8	703 aa	Known RBP	7.51	□□□□□ -1.21
TARDBP-208	ENST00000477447	PTPRE	P23469	700 aa		7.5	□□□□□ -1.21
TARDBP-208	ENST00000477447	KCNK17	Q96T54	332 aa		7.5	□□□□□ -1.21
TARDBP-208	ENST00000477447	NPDC1	Q9NQX5	325 aa	Predicted RBP	7.5	□□□□□ -1.21
TARDBP-208	ENST00000477447	FECH	P22830	423 aa		7.49	□□□□□ -1.21
TARDBP-208	ENST00000477447	CERK	Q8TCT0	537 aa		7.49	□□□□□ -1.21
TARDBP-208	ENST00000477447	KCNH8	Q96L42	1107 aa		7.49	□□□□□ -1.21
TARDBP-208	ENST00000477447	COL9A1	P20849	921 aa		7.48	□□□□□ -1.21
TARDBP-208	ENST00000477447	MAP2K5	Q13163	448 aa		7.48	□□□□□ -1.21
TARDBP-208	ENST00000477447	PPP1R3G	B7ZBB8	358 aa		7.47	□□□□□ -1.21
TARDBP-208	ENST00000477447	PADI6	Q6TGC4	694 aa		7.47	□□□□□ -1.21
TARDBP-208	ENST00000477447	HS3ST6	Q96QI5	342 aa		7.47	□□□□□ -1.21
TARDBP-208	ENST00000477447	CCDC102A	Q96A19	550 aa		7.46	□□□□□ -1.22
TARDBP-208	ENST00000477447	PSEN2	P49810	448 aa		7.45	□□□□□ -1.22
TARDBP-208	ENST00000477447	PRSS12	P56730	875 aa		7.45	□□□□□ -1.22
TARDBP-208	ENST00000477447	CDCA7L	Q96GN5	454 aa		7.45	□□□□□ -1.22
TARDBP-208	ENST00000477447	AK7	Q96M32	723 aa		7.45	□□□□□ -1.22
TARDBP-208	ENST00000477447	MINK1	Q8N4C8	1332 aa	Predicted RBP	7.45	□□□□□ -1.22
TARDBP-208	ENST00000477447	POTEB3	A0JP26	581 aa		7.44	□□□□□ -1.22
TARDBP-208	ENST00000477447	POTEB	Q6S5H4	581 aa		7.44	□□□□□ -1.22
TARDBP-208	ENST00000477447	ZNF687	Q8N1G0	1237 aa		7.44	□□□□□ -1.22
TARDBP-208	ENST00000477447	RBM27	Q9P2N5	1060 aa	Known RBP	7.44	□□□□□ -1.22
TARDBP-208	ENST00000477447	AXIN2	Q9Y2T1	843 aa		7.44	□□□□□ -1.22
TARDBP-208	ENST00000477447	ARHGAP33	O14559	1287 aa		7.43	□□□□□ -1.22
TARDBP-208	ENST00000477447	IRF6	O14896	467 aa		7.43	□□□□□ -1.22
TARDBP-208	ENST00000477447	PBX2	P40425	430 aa		7.43	□□□□□ -1.22
TARDBP-208	ENST00000477447	POTEE	Q6S8J3	1075 aa		7.43	□□□□□ -1.22
TARDBP-208	ENST00000477447	FAM161A	Q3B820	660 aa		7.42	□□□□□ -1.22
TARDBP-208	ENST00000477447	PROX2	Q3B8N5	592 aa		7.42	□□□□□ -1.22
TARDBP-208	ENST00000477447	TRIM6-TRIM34	B2RNG4	842 aa		7.41	□□□□□ -1.22
TARDBP-208	ENST00000477447	DMRTA1	Q5VZB9	504 aa		7.41	□□□□□ -1.22
TARDBP-208	ENST00000477447	TTC13	Q8NBP0	860 aa		7.41	□□□□□ -1.22
TARDBP-208	ENST00000477447	FAM198A	Q9UFP1	575 aa		7.41	□□□□□ -1.22
TARDBP-208	ENST00000477447	TRIM66	O15016	1216 aa		7.4	□□□□□ -1.22
TARDBP-208	ENST00000477447	ZBED2	Q9BTP6	218 aa		7.4	□□□□□ -1.22
TARDBP-208	ENST00000477447	TSKS	Q9UJT2	592 aa		7.4	□□□□□ -1.22
TARDBP-208	ENST00000477447	ADGRG1	Q9Y653	693 aa		7.4	□□□□□ -1.22
TARDBP-208	ENST00000477447	NEUROD2	Q15784	382 aa		7.39	□□□□□ -1.23
TARDBP-208	ENST00000477447	PCDH10	Q9P2E7	1040 aa		7.39	□□□□□ -1.23
TARDBP-208	ENST00000477447	NBPF26	B4DH59	902 aa		7.38	□□□□□ -1.23
TARDBP-208	ENST00000477447	BRPF1	P55201	1214 aa	Predicted RBP	7.38	□□□□□ -1.23
TARDBP-208	ENST00000477447	PDE4D	Q08499	809 aa		7.38	□□□□□ -1.23
TARDBP-208	ENST00000477447	OAT	P04181	439 aa		7.37	□□□□□ -1.23
TARDBP-208	ENST00000477447	METTL3	Q86U44	580 aa	Known RBP	7.37	□□□□□ -1.23
TARDBP-208	ENST00000477447	PACS2	Q86VP3	889 aa		7.37	□□□□□ -1.23
TARDBP-208	ENST00000477447	RBM46	Q8TBY0	533 aa	Known RBP	7.37	□□□□□ -1.23
TARDBP-208	ENST00000477447	PNMA3	Q9UL41	463 aa		7.37	□□□□□ -1.23
TARDBP-208	ENST00000477447	C3orf80	F5H4A9	247 aa		7.36	□□□□□ -1.23
TARDBP-208	ENST00000477447	LSM11	P83369	360 aa	Known RBP eCLIP	7.36	□□□□□ -1.23	3e-9	■■□□□ 11.9
TARDBP-208	ENST00000477447	TTLL12	Q14166	644 aa	Predicted RBP	7.36	□□□□□ -1.23
TARDBP-208	ENST00000477447	AMHR2	Q16671	573 aa		7.36	□□□□□ -1.23
TARDBP-208	ENST00000477447	NUDT18	Q6ZVK8	323 aa		7.36	□□□□□ -1.23
TARDBP-208	ENST00000477447	PXYLP1	Q8TE99	480 aa		7.36	□□□□□ -1.23
TARDBP-208	ENST00000477447	GPBP1L1	Q9HC44	474 aa	Predicted RBP	7.36	□□□□□ -1.23
TARDBP-208	ENST00000477447	KIAA1468	Q9P260	1216 aa		7.36	□□□□□ -1.23
TARDBP-208	ENST00000477447	SMAP	O00193	183 aa		7.35	□□□□□ -1.23
TARDBP-208	ENST00000477447	NLRP7	Q8WX94	980 aa		7.35	□□□□□ -1.23
TARDBP-208	ENST00000477447	TATDN2	Q93075	761 aa		7.35	□□□□□ -1.23
TARDBP-208	ENST00000477447	PHOX2B	Q99453	314 aa		7.35	□□□□□ -1.23
TARDBP-208	ENST00000477447	SLC4A5	Q9BY07	1137 aa		7.35	□□□□□ -1.23
TARDBP-208	ENST00000477447	VPS9D1	Q9Y2B5	631 aa		7.35	□□□□□ -1.23
TARDBP-208	ENST00000477447	ONECUT3	O60422	494 aa	Predicted RBP	7.34	□□□□□ -1.23
TARDBP-208	ENST00000477447	MDM2	Q00987	491 aa	Predicted RBP	7.34	□□□□□ -1.23
TARDBP-208	ENST00000477447	PARP9	Q8IXQ6	854 aa		7.34	□□□□□ -1.23
TARDBP-208	ENST00000477447	SEPT9	Q9UHD8	586 aa	Predicted RBP	7.34	□□□□□ -1.23
TARDBP-208	ENST00000477447	RABGEF1	Q9UJ41	708 aa		7.33	□□□□□ -1.24
TARDBP-208	ENST00000477447	TK2	O00142	265 aa		7.32	□□□□□ -1.24
TARDBP-208	ENST00000477447	ADGRD1	Q6QNK2	874 aa		7.32	□□□□□ -1.24
TARDBP-208	ENST00000477447	ANKRD13D	Q6ZTN6	518 aa		7.32	□□□□□ -1.24
TARDBP-208	ENST00000477447	EYA1	Q99502	592 aa		7.32	□□□□□ -1.24
TARDBP-208	ENST00000477447	KDM4C	Q9H3R0	1056 aa		7.32	□□□□□ -1.24
TARDBP-208	ENST00000477447	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	7.31	□□□□□ -1.24
TARDBP-208	ENST00000477447	RCCD1	A6NED2	376 aa		7.31	□□□□□ -1.24
TARDBP-208	ENST00000477447	DNAJB2	P25686	324 aa		7.31	□□□□□ -1.24
TARDBP-208	ENST00000477447	CLCN1	P35523	988 aa		7.31	□□□□□ -1.24
TARDBP-208	ENST00000477447	GIGYF2	Q6Y7W6	1299 aa	Known RBP	7.31	□□□□□ -1.24
TARDBP-208	ENST00000477447	NBPF3	Q9H094	633 aa		7.31	□□□□□ -1.24
TARDBP-208	ENST00000477447	GPCPD1	Q9NPB8	672 aa		7.3	□□□□□ -1.24
TARDBP-208	ENST00000477447	REPIN1	Q9BWE0	567 aa	Known RBP	7.29	□□□□□ -1.24
TARDBP-208	ENST00000477447	KRTAP3-3	Q9BYR6	98 aa		7.29	□□□□□ -1.24
TARDBP-208	ENST00000477447	KRTAP3-2	Q9BYR7	98 aa		7.29	□□□□□ -1.24
TARDBP-208	ENST00000477447	FAM98C	Q17RN3	349 aa	Known RBP	7.28	□□□□□ -1.24
TARDBP-208	ENST00000477447	CDAN1	Q8IWY9	1227 aa		7.28	□□□□□ -1.24
TARDBP-208	ENST00000477447	MRPL50	Q8N5N7	158 aa	Known RBP	7.28	□□□□□ -1.24
TARDBP-208	ENST00000477447	TMEM134	Q9H6X4	195 aa		7.28	□□□□□ -1.24
TARDBP-208	ENST00000477447	BHMG1	C9JSJ3	638 aa	Predicted RBP	7.27	□□□□□ -1.25
TARDBP-208	ENST00000477447	STAC3	Q96MF2	364 aa		7.27	□□□□□ -1.25
TARDBP-208	ENST00000477447	HR	O43593	1189 aa		7.26	□□□□□ -1.25

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