RNA–Protein interactions for RNA: ENST00000477215.5

SYCP1-205, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-205ENST00000477215 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
SYCP1-205ENST00000477215 GFRA3O60609 400 aa11.31□□□□□ -0.6
SYCP1-205ENST00000477215 PROX2Q3B8N5 592 aa11.3□□□□□ -0.6
SYCP1-205ENST00000477215 LCE2BO14633 110 aa11.29□□□□□ -0.6
SYCP1-205ENST00000477215 LAPTM4BQ86VI4 370 aa11.28□□□□□ -0.6
SYCP1-205ENST00000477215 CRISPLD2Q9H0B8 497 aa11.28□□□□□ -0.6
SYCP1-205ENST00000477215 WBP1LQ9NX94 342 aa11.27□□□□□ -0.61
SYCP1-205ENST00000477215 ZFRQ96KR1 1074 aaKnown RBP11.26□□□□□ -0.61
SYCP1-205ENST00000477215 CFAP44Q96MT7 982 aa11.26□□□□□ -0.61
SYCP1-205ENST00000477215 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
SYCP1-205ENST00000477215 PAXIP1Q6ZW49 1069 aaPredicted RBP11.24□□□□□ -0.61
SYCP1-205ENST00000477215 PDE4AP27815 886 aa11.23□□□□□ -0.61
SYCP1-205ENST00000477215 COL9A1P20849 921 aa11.22□□□□□ -0.61
SYCP1-205ENST00000477215 MAP3K9P80192 1104 aa11.21□□□□□ -0.61
SYCP1-205ENST00000477215 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
SYCP1-205ENST00000477215 KIAA1468Q9P260 1216 aa11.21□□□□□ -0.61
SYCP1-205ENST00000477215 NCKAP5LQ9HCH0 1330 aa11.2□□□□□ -0.62
SYCP1-205ENST00000477215 PCDHGA10Q9Y5H3 936 aa11.19□□□□□ -0.62
SYCP1-205ENST00000477215 NRG2O14511 850 aaPredicted RBP11.18□□□□□ -0.62
SYCP1-205ENST00000477215 CADPS2Q86UW7 1296 aa11.17□□□□□ -0.62
SYCP1-205ENST00000477215 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
SYCP1-205ENST00000477215 SEPT9Q9UHD8 586 aaPredicted RBP11.17□□□□□ -0.62
SYCP1-205ENST00000477215 TSR3Q9UJK0 312 aaKnown RBP11.17□□□□□ -0.62
SYCP1-205ENST00000477215 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
SYCP1-205ENST00000477215 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
SYCP1-205ENST00000477215 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.16□□□□□ -0.62
SYCP1-205ENST00000477215 HPS5Q9UPZ3 1129 aa11.16□□□□□ -0.62
SYCP1-205ENST00000477215 ONECUT3O60422 494 aaPredicted RBP11.15□□□□□ -0.62
SYCP1-205ENST00000477215 ZNF787Q6DD87 383 aa11.15□□□□□ -0.62
SYCP1-205ENST00000477215 TYW1BQ6NUM6 668 aa11.15□□□□□ -0.62
SYCP1-205ENST00000477215 LRCH3Q96II8 777 aa11.14□□□□□ -0.63
SYCP1-205ENST00000477215 FAM98CQ17RN3 349 aaKnown RBP11.12□□□□□ -0.63
SYCP1-205ENST00000477215 PHF14O94880 888 aa11.1□□□□□ -0.63
SYCP1-205ENST00000477215 TRIM6-TRIM34B2RNG4 842 aa11.08□□□□□ -0.64
SYCP1-205ENST00000477215 MFSD10Q14728 455 aa11.07□□□□□ -0.64
SYCP1-205ENST00000477215 V9GY48 417 aaPredicted RBP11.07□□□□□ -0.64
SYCP1-205ENST00000477215 PPP4CP60510 307 aa11.06□□□□□ -0.64
SYCP1-205ENST00000477215 ZNF775Q96BV0 537 aaPredicted RBP11.06□□□□□ -0.64
SYCP1-205ENST00000477215 C6orf132Q5T0Z8 1188 aa11.05□□□□□ -0.64
SYCP1-205ENST00000477215 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
SYCP1-205ENST00000477215 PPP1R18Q6NYC8 613 aa11.03□□□□□ -0.64
SYCP1-205ENST00000477215 PDZRN3Q9UPQ7 1066 aa11.03□□□□□ -0.64
SYCP1-205ENST00000477215 TJAP1Q5JTD0 557 aa11.02□□□□□ -0.65
SYCP1-205ENST00000477215 EPAS1Q99814 870 aa11.02□□□□□ -0.65
SYCP1-205ENST00000477215 WDR70Q9NW82 654 aa10.99□□□□□ -0.65
SYCP1-205ENST00000477215 IL21Q9HBE4 155 aa10.98□□□□□ -0.65
SYCP1-205ENST00000477215 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.98□□□□□ -0.65
SYCP1-205ENST00000477215 PACS2Q86VP3 889 aa10.97□□□□□ -0.65
SYCP1-205ENST00000477215 MTRQ99707 1265 aa10.97□□□□□ -0.65
SYCP1-205ENST00000477215 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
SYCP1-205ENST00000477215 TSHZ2Q9NRE2 1034 aa10.95□□□□□ -0.66
SYCP1-205ENST00000477215 DPYSL4O14531 572 aa10.94□□□□□ -0.66
SYCP1-205ENST00000477215 CAMK2BQ13554 666 aa10.92□□□□□ -0.66
SYCP1-205ENST00000477215 SAMD7Q7Z3H4 446 aa10.92□□□□□ -0.66
SYCP1-205ENST00000477215 TSKSQ9UJT2 592 aa10.91□□□□□ -0.66
SYCP1-205ENST00000477215 ZNF516Q92618 1163 aa10.9□□□□□ -0.66
SYCP1-205ENST00000477215 GGCXP38435 758 aa10.89□□□□□ -0.67
SYCP1-205ENST00000477215 E2F4Q16254 413 aa10.89□□□□□ -0.67
SYCP1-205ENST00000477215 PLCB2Q00722 1185 aa10.87□□□□□ -0.67
SYCP1-205ENST00000477215 DDX12PQ92771 950 aa10.86□□□□□ -0.67
SYCP1-205ENST00000477215 SMAPO00193 183 aa10.85□□□□□ -0.67
SYCP1-205ENST00000477215 MAP3K7O43318 606 aa10.84□□□□□ -0.67
SYCP1-205ENST00000477215 RNF40O75150 1001 aa10.83□□□□□ -0.68
SYCP1-205ENST00000477215 PKDCCQ504Y2 493 aa10.83□□□□□ -0.68
SYCP1-205ENST00000477215 NKX2-3Q8TAU0 364 aa10.83□□□□□ -0.68
SYCP1-205ENST00000477215 TSR1Q2NL82 804 aaKnown RBP10.82□□□□□ -0.68
SYCP1-205ENST00000477215 EN1Q05925 392 aaPredicted RBP10.81□□□□□ -0.68
SYCP1-205ENST00000477215 NBR1Q14596 966 aa10.81□□□□□ -0.68
SYCP1-205ENST00000477215 HDGFP51858 240 aaKnown RBP10.8□□□□□ -0.68
SYCP1-205ENST00000477215 HAP1P54257 671 aaPredicted RBP10.8□□□□□ -0.68
SYCP1-205ENST00000477215 CDCA7LQ96GN5 454 aa10.8□□□□□ -0.68
SYCP1-205ENST00000477215 TMUB1Q9BVT8 246 aa10.8□□□□□ -0.68
SYCP1-205ENST00000477215 APLP1P51693 650 aa10.79□□□□□ -0.68
SYCP1-205ENST00000477215 NBPF26B4DH59 902 aa10.78□□□□□ -0.68
SYCP1-205ENST00000477215 MYT1Q01538 1121 aa10.78□□□□□ -0.68
SYCP1-205ENST00000477215 DGAT1O75907 488 aa10.77□□□□□ -0.69
SYCP1-205ENST00000477215 PRSS12P56730 875 aa10.77□□□□□ -0.69
SYCP1-205ENST00000477215 PDIA6Q15084 440 aa10.77□□□□□ -0.69
SYCP1-205ENST00000477215 TATDN2Q93075 761 aa10.77□□□□□ -0.69
SYCP1-205ENST00000477215 PNMA3Q9UL41 463 aa10.77□□□□□ -0.69
SYCP1-205ENST00000477215 POTECB2RU33 542 aa10.76□□□□□ -0.69
SYCP1-205ENST00000477215 COPS2P61201 443 aa10.76□□□□□ -0.69
SYCP1-205ENST00000477215 SPDYE16A6NNV3 312 aaPredicted RBP10.75□□□□□ -0.69
SYCP1-205ENST00000477215 TRIM67Q6ZTA4 783 aa10.75□□□□□ -0.69
SYCP1-205ENST00000477215 NECTIN2Q92692 538 aa10.75□□□□□ -0.69
SYCP1-205ENST00000477215 GRXCR2A6NFK2 248 aa10.74□□□□□ -0.69
SYCP1-205ENST00000477215 SLC19A1P41440 591 aa10.74□□□□□ -0.69
SYCP1-205ENST00000477215 FAM198AQ9UFP1 575 aa10.74□□□□□ -0.69
SYCP1-205ENST00000477215 TREML4Q6UXN2 200 aa10.73□□□□□ -0.69
SYCP1-205ENST00000477215 CERKQ8TCT0 537 aa10.73□□□□□ -0.69
SYCP1-205ENST00000477215 KCNV2Q8TDN2 545 aa10.71□□□□□ -0.69
SYCP1-205ENST00000477215 C3orf80F5H4A9 247 aa10.7□□□□□ -0.7
SYCP1-205ENST00000477215 ZPR1O75312 459 aa10.69□□□□□ -0.7
SYCP1-205ENST00000477215 NUDT18Q6ZVK8 323 aa10.69□□□□□ -0.7
SYCP1-205ENST00000477215 ARIH1Q9Y4X5 557 aaPredicted RBP10.69□□□□□ -0.7
SYCP1-205ENST00000477215 FAM187AA6NFU0 413 aa10.68□□□□□ -0.7
SYCP1-205ENST00000477215 PRR20EP86478 221 aa10.68□□□□□ -0.7
SYCP1-205ENST00000477215 PRR20CP86479 221 aa10.68□□□□□ -0.7
SYCP1-205ENST00000477215 PRR20DP86480 221 aa10.68□□□□□ -0.7
SYCP1-205ENST00000477215 PRR20BP86481 221 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms