RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 GOLGA2Q08379 1002 aa12.55□□□□□ -0.4
GSDMB-208ENST00000477054 NAP1L5Q96NT1 182 aaPredicted RBP12.55□□□□□ -0.4
GSDMB-208ENST00000477054 USP35Q9P2H5 1018 aa12.55□□□□□ -0.4
GSDMB-208ENST00000477054 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
GSDMB-208ENST00000477054 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
GSDMB-208ENST00000477054 ANP32BQ92688 251 aaKnown RBP12.53□□□□□ -0.4
GSDMB-208ENST00000477054 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.41
GSDMB-208ENST00000477054 STAC3Q96MF2 364 aa12.52□□□□□ -0.41
GSDMB-208ENST00000477054 CHMP4BQ9H444 224 aaKnown RBP12.52□□□□□ -0.41
GSDMB-208ENST00000477054 MAPKBP1O60336 1514 aa12.52□□□□□ -0.41
GSDMB-208ENST00000477054 RRP1P56182 461 aaKnown RBP12.51□□□□□ -0.41
GSDMB-208ENST00000477054 SAFB2Q14151 953 aaKnown RBP eCLIP12.51□□□□□ -0.41
GSDMB-208ENST00000477054 ARHGAP5Q13017 1502 aa12.5□□□□□ -0.41
GSDMB-208ENST00000477054 BRD4O60885 1362 aaPredicted RBP12.5□□□□□ -0.41
GSDMB-208ENST00000477054 WASHC2CQ9Y4E1 1318 aa12.49□□□□□ -0.41
GSDMB-208ENST00000477054 HDGFL2Q7Z4V5 671 aaPredicted RBP12.49□□□□□ -0.41
GSDMB-208ENST00000477054 STK26Q9P289 416 aa12.49□□□□□ -0.41
GSDMB-208ENST00000477054 ABCC5O15440 1437 aa12.48□□□□□ -0.41
GSDMB-208ENST00000477054 ANKRD30BQ9BXX2 1392 aa12.48□□□□□ -0.41
GSDMB-208ENST00000477054 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
GSDMB-208ENST00000477054 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
GSDMB-208ENST00000477054 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
GSDMB-208ENST00000477054 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
GSDMB-208ENST00000477054 AKNAQ7Z591 1439 aa12.47□□□□□ -0.41
GSDMB-208ENST00000477054 CCDC146Q8IYE0 955 aa12.47□□□□□ -0.41
GSDMB-208ENST00000477054 UBE2Q2Q8WVN8 375 aa12.47□□□□□ -0.41
GSDMB-208ENST00000477054 GRIN2AQ12879 1464 aa12.47□□□□□ -0.41
GSDMB-208ENST00000477054 CFAP43Q8NDM7 1665 aa12.47□□□□□ -0.41
GSDMB-208ENST00000477054 PLEKHH2Q8IVE3 1493 aa12.47□□□□□ -0.41
GSDMB-208ENST00000477054 CAMSAP2Q08AD1 1489 aa12.46□□□□□ -0.41
GSDMB-208ENST00000477054 CTTNBP2Q8WZ74 1663 aa12.46□□□□□ -0.41
GSDMB-208ENST00000477054 ARXQ96QS3 562 aa12.46□□□□□ -0.42
GSDMB-208ENST00000477054 EXOC6Q8TAG9 804 aa12.45□□□□□ -0.42
GSDMB-208ENST00000477054 MAGI1Q96QZ7 1491 aaPredicted RBP12.45□□□□□ -0.42
GSDMB-208ENST00000477054 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
GSDMB-208ENST00000477054 TRAK1Q9UPV9 953 aa12.44□□□□□ -0.42
GSDMB-208ENST00000477054 MSH5O43196 834 aa12.44□□□□□ -0.42
GSDMB-208ENST00000477054 UGGT2Q9NYU1 1516 aa12.44□□□□□ -0.42
GSDMB-208ENST00000477054 CENPJQ9HC77 1338 aaPredicted RBP12.44□□□□□ -0.42
GSDMB-208ENST00000477054 TERF2IPQ9NYB0 399 aa12.44□□□□□ -0.42
GSDMB-208ENST00000477054 TRIM44Q96DX7 344 aaPredicted RBP12.43□□□□□ -0.42
GSDMB-208ENST00000477054 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
GSDMB-208ENST00000477054 PTPRKQ15262 1439 aa12.43□□□□□ -0.42
GSDMB-208ENST00000477054 IPO8O15397 1037 aaKnown RBP12.43□□□□□ -0.42
GSDMB-208ENST00000477054 L1TD1Q5T7N2 865 aaKnown RBP12.42□□□□□ -0.42
GSDMB-208ENST00000477054 C14orf37Q86TY3 774 aa12.42□□□□□ -0.42
GSDMB-208ENST00000477054 RWDD1Q9H446 243 aaPredicted RBP12.42□□□□□ -0.42
GSDMB-208ENST00000477054 PLB1Q6P1J6 1458 aa12.42□□□□□ -0.42
GSDMB-208ENST00000477054 NGEFQ8N5V2 710 aa12.42□□□□□ -0.42
GSDMB-208ENST00000477054 PMFBP1Q8TBY8 1022 aa12.42□□□□□ -0.42
GSDMB-208ENST00000477054 MLECQ14165 292 aa12.41□□□□□ -0.42
GSDMB-208ENST00000477054 RPRD2Q5VT52 1461 aaKnown RBP12.41□□□□□ -0.42
GSDMB-208ENST00000477054 E9PSI1 815 aa12.41□□□□□ -0.42
GSDMB-208ENST00000477054 CASC1Q6TDU7 716 aa12.41□□□□□ -0.42
GSDMB-208ENST00000477054 VGFO15240 615 aaPredicted RBP12.41□□□□□ -0.42
GSDMB-208ENST00000477054 CENPQQ7L2Z9 268 aaPredicted RBP12.41□□□□□ -0.42
GSDMB-208ENST00000477054 IL27Q8NEV9 243 aa12.41□□□□□ -0.42
GSDMB-208ENST00000477054 PLIN1O60240 522 aa12.4□□□□□ -0.42
GSDMB-208ENST00000477054 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
GSDMB-208ENST00000477054 NCOA1Q15788 1441 aa12.4□□□□□ -0.42
GSDMB-208ENST00000477054 GOLGA6L22H0YM25 854 aa12.4□□□□□ -0.42
GSDMB-208ENST00000477054 CCDC184Q52MB2 194 aa12.4□□□□□ -0.43
GSDMB-208ENST00000477054 CRBNQ96SW2 442 aa12.4□□□□□ -0.43
GSDMB-208ENST00000477054 CGNL1Q0VF96 1302 aa12.39□□□□□ -0.43
GSDMB-208ENST00000477054 HAP1P54257 671 aaPredicted RBP12.39□□□□□ -0.43
GSDMB-208ENST00000477054 ZNF608Q9ULD9 1512 aaPredicted RBP12.39□□□□□ -0.43
GSDMB-208ENST00000477054 GSE1Q14687 1217 aa12.39□□□□□ -0.43
GSDMB-208ENST00000477054 NBPF1Q3BBV0 1214 aa12.39□□□□□ -0.43
GSDMB-208ENST00000477054 NUTM2DQ5VT03 806 aaPredicted RBP12.39□□□□□ -0.43
GSDMB-208ENST00000477054 EVC2Q86UK5 1308 aa12.39□□□□□ -0.43
GSDMB-208ENST00000477054 CCDC141Q6ZP82 1450 aa12.39□□□□□ -0.43
GSDMB-208ENST00000477054 ARHGEF11O15085 1522 aa12.39□□□□□ -0.43
GSDMB-208ENST00000477054 KIF14Q15058 1648 aa12.39□□□□□ -0.43
GSDMB-208ENST00000477054 PNISRQ8TF01 805 aaKnown RBP12.39□□□□□ -0.43
GSDMB-208ENST00000477054 PDE4AP27815 886 aa12.38□□□□□ -0.43
GSDMB-208ENST00000477054 HSP90AA2PQ14568 343 aaPredicted RBP12.38□□□□□ -0.43
GSDMB-208ENST00000477054 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
GSDMB-208ENST00000477054 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
GSDMB-208ENST00000477054 APAF1O14727 1248 aa12.37□□□□□ -0.43
GSDMB-208ENST00000477054 TCOF1Q13428 1488 aaKnown RBP12.37□□□□□ -0.43
GSDMB-208ENST00000477054 ZBTB7CA1YPR0 619 aa12.37□□□□□ -0.43
GSDMB-208ENST00000477054 C11orf95C9JLR9 678 aaPredicted RBP12.37□□□□□ -0.43
GSDMB-208ENST00000477054 ITPRIPQ8IWB1 547 aa12.36□□□□□ -0.43
GSDMB-208ENST00000477054 SMC4Q9NTJ3 1288 aa12.36□□□□□ -0.43
GSDMB-208ENST00000477054 HSCBQ8IWL3 235 aa12.35□□□□□ -0.43
GSDMB-208ENST00000477054 RAPGEF6Q8TEU7 1601 aa12.34□□□□□ -0.43
GSDMB-208ENST00000477054 RRP7AQ9Y3A4 280 aaKnown RBP12.34□□□□□ -0.43
GSDMB-208ENST00000477054 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
GSDMB-208ENST00000477054 OSCARQ8IYS5 282 aa12.34□□□□□ -0.43
GSDMB-208ENST00000477054 ERBINQ96RT1 1412 aa12.34□□□□□ -0.43
GSDMB-208ENST00000477054 FAM161AQ3B820 660 aa12.33□□□□□ -0.44
GSDMB-208ENST00000477054 CFAP44Q96MT7 982 aa12.33□□□□□ -0.44
GSDMB-208ENST00000477054 ADAMTS8Q9UP79 889 aa12.33□□□□□ -0.44
GSDMB-208ENST00000477054 GPATCH8Q9UKJ3 1502 aaKnown RBP12.33□□□□□ -0.44
GSDMB-208ENST00000477054 CLUAP1Q96AJ1 413 aa12.33□□□□□ -0.44
GSDMB-208ENST00000477054 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
GSDMB-208ENST00000477054 ADAMTS12P58397 1594 aa12.32□□□□□ -0.44
GSDMB-208ENST00000477054 NUP153P49790 1475 aaKnown RBP12.32□□□□□ -0.44
GSDMB-208ENST00000477054 WDR62O43379 1518 aa12.3□□□□□ -0.44
GSDMB-208ENST00000477054 CFAP70Q5T0N1 1121 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms