RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 RIMBP3BA6NNM3 1639 aa11.11□□□□□ -0.63
CNTNAP3B-205ENST00000476961 RIMBP3Q9UFD9 1639 aa11.11□□□□□ -0.63
CNTNAP3B-205ENST00000476961 KCNH8Q96L42 1107 aa11.11□□□□□ -0.63
CNTNAP3B-205ENST00000476961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.11□□□□□ -0.63
CNTNAP3B-205ENST00000476961 ITSN2Q9NZM3 1697 aa11.11□□□□□ -0.63
CNTNAP3B-205ENST00000476961 CDK11BP21127 795 aaKnown RBP11.1□□□□□ -0.63
CNTNAP3B-205ENST00000476961 CDC42BPAQ5VT25 1732 aa11.1□□□□□ -0.63
CNTNAP3B-205ENST00000476961 TTC37Q6PGP7 1564 aa11.1□□□□□ -0.63
CNTNAP3B-205ENST00000476961 CAMSAP2Q08AD1 1489 aa11.09□□□□□ -0.63
CNTNAP3B-205ENST00000476961 WDR7Q9Y4E6 1490 aa11.09□□□□□ -0.63
CNTNAP3B-205ENST00000476961 CYB5RLQ6IPT4 315 aa11.08□□□□□ -0.64
CNTNAP3B-205ENST00000476961 RNF216Q9NWF9 866 aaPredicted RBP11.08□□□□□ -0.64
CNTNAP3B-205ENST00000476961 PPM1GO15355 546 aaPredicted RBP11.08□□□□□ -0.64
CNTNAP3B-205ENST00000476961 IPO9Q96P70 1041 aaKnown RBP11.08□□□□□ -0.64
CNTNAP3B-205ENST00000476961 ASXL2Q76L83 1435 aa11.08□□□□□ -0.64
CNTNAP3B-205ENST00000476961 ZNF777Q9ULD5 760 aaPredicted RBP11.07□□□□□ -0.64
CNTNAP3B-205ENST00000476961 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
CNTNAP3B-205ENST00000476961 ABCC5O15440 1437 aa11.06□□□□□ -0.64
CNTNAP3B-205ENST00000476961 GSE1Q14687 1217 aa11.06□□□□□ -0.64
CNTNAP3B-205ENST00000476961 SETD5Q9C0A6 1442 aa11.06□□□□□ -0.64
CNTNAP3B-205ENST00000476961 PREX2Q70Z35 1606 aa11.06□□□□□ -0.64
CNTNAP3B-205ENST00000476961 RAB3GAP2Q9H2M9 1393 aa11.06□□□□□ -0.64
CNTNAP3B-205ENST00000476961 DAPK1P53355 1430 aa11.06□□□□□ -0.64
CNTNAP3B-205ENST00000476961 CDC42BPBQ9Y5S2 1711 aa11.05□□□□□ -0.64
CNTNAP3B-205ENST00000476961 DNMT1P26358 1616 aaKnown RBP11.05□□□□□ -0.64
CNTNAP3B-205ENST00000476961 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
CNTNAP3B-205ENST00000476961 CHIC2Q9UKJ5 165 aa11.05□□□□□ -0.64
CNTNAP3B-205ENST00000476961 HFM1A2PYH4 1435 aa11.04□□□□□ -0.64
CNTNAP3B-205ENST00000476961 ZNF830Q96NB3 372 aaPredicted RBP11.04□□□□□ -0.64
CNTNAP3B-205ENST00000476961 PLCH2O75038 1416 aa11.04□□□□□ -0.64
CNTNAP3B-205ENST00000476961 CNPY4Q8N129 248 aa11.04□□□□□ -0.64
CNTNAP3B-205ENST00000476961 NAIPQ13075 1403 aa11.03□□□□□ -0.64
CNTNAP3B-205ENST00000476961 ARHGAP5Q13017 1502 aa11.03□□□□□ -0.64
CNTNAP3B-205ENST00000476961 SAMD9LQ8IVG5 1584 aa11.03□□□□□ -0.64
CNTNAP3B-205ENST00000476961 PDCL3Q9H2J4 239 aa11.03□□□□□ -0.64
CNTNAP3B-205ENST00000476961 MYO5CQ9NQX4 1742 aa11.03□□□□□ -0.64
CNTNAP3B-205ENST00000476961 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.65
CNTNAP3B-205ENST00000476961 DHX57Q6P158 1386 aaKnown RBP11.02□□□□□ -0.65
CNTNAP3B-205ENST00000476961 ARID4BQ4LE39 1312 aaPredicted RBP11.02□□□□□ -0.65
CNTNAP3B-205ENST00000476961 RRP7BPQ9NSQ0 103 aa11.02□□□□□ -0.65
CNTNAP3B-205ENST00000476961 ABCA9Q8IUA7 1624 aa11.01□□□□□ -0.65
CNTNAP3B-205ENST00000476961 MBD5Q9P267 1494 aa11.01□□□□□ -0.65
CNTNAP3B-205ENST00000476961 AKNAQ7Z591 1439 aa11.01□□□□□ -0.65
CNTNAP3B-205ENST00000476961 KCNG1Q9UIX4 513 aa11.01□□□□□ -0.65
CNTNAP3B-205ENST00000476961 HNRNPMP52272 730 aaKnown RBP eCLIP11.01□□□□□ -0.65
CNTNAP3B-205ENST00000476961 ROCK1Q13464 1354 aa11□□□□□ -0.65
CNTNAP3B-205ENST00000476961 RRAGDQ9NQL2 400 aaPredicted RBP11□□□□□ -0.65
CNTNAP3B-205ENST00000476961 TMEM51Q9NW97 253 aa11□□□□□ -0.65
CNTNAP3B-205ENST00000476961 NCLP19338 710 aaKnown RBP11□□□□□ -0.65
CNTNAP3B-205ENST00000476961 ARAP3Q8WWN8 1544 aa10.99□□□□□ -0.65
CNTNAP3B-205ENST00000476961 ANP32AP39687 249 aaKnown RBP10.99□□□□□ -0.65
CNTNAP3B-205ENST00000476961 TPRNQ4KMQ1 711 aa10.99□□□□□ -0.65
CNTNAP3B-205ENST00000476961 EFCAB2Q5VUJ9 269 aa10.99□□□□□ -0.65
CNTNAP3B-205ENST00000476961 ARHGEF5Q12774 1597 aa10.99□□□□□ -0.65
CNTNAP3B-205ENST00000476961 MAPKBP1O60336 1514 aa10.99□□□□□ -0.65
CNTNAP3B-205ENST00000476961 CROCC2H7BZ55 1655 aa10.98□□□□□ -0.65
CNTNAP3B-205ENST00000476961 KIAA1107Q9UPP5 1409 aa10.98□□□□□ -0.65
CNTNAP3B-205ENST00000476961 SYCP2Q9BX26 1530 aa10.98□□□□□ -0.65
CNTNAP3B-205ENST00000476961 ARHGEF12Q9NZN5 1544 aa10.98□□□□□ -0.65
CNTNAP3B-205ENST00000476961 GCC2Q8IWJ2 1684 aa10.97□□□□□ -0.65
CNTNAP3B-205ENST00000476961 NCOA1Q15788 1441 aa10.97□□□□□ -0.65
CNTNAP3B-205ENST00000476961 ADGRL2O95490 1459 aa10.97□□□□□ -0.65
CNTNAP3B-205ENST00000476961 PLEKHH2Q8IVE3 1493 aa10.97□□□□□ -0.65
CNTNAP3B-205ENST00000476961 SHANK2Q9UPX8 1470 aa10.97□□□□□ -0.65
CNTNAP3B-205ENST00000476961 CCDC141Q6ZP82 1450 aa10.97□□□□□ -0.65
CNTNAP3B-205ENST00000476961 C9orf84Q5VXU9 1444 aa10.96□□□□□ -0.65
CNTNAP3B-205ENST00000476961 KDM6BO15054 1643 aa10.96□□□□□ -0.65
CNTNAP3B-205ENST00000476961 DCAF11Q8TEB1 546 aa10.95□□□□□ -0.66
CNTNAP3B-205ENST00000476961 ABCC1P33527 1531 aa10.95□□□□□ -0.66
CNTNAP3B-205ENST00000476961 FANCAO15360 1455 aa10.95□□□□□ -0.66
CNTNAP3B-205ENST00000476961 TSPY4P0CV99 314 aa10.95□□□□□ -0.66
CNTNAP3B-205ENST00000476961 TSPY10P0CW01 314 aa10.95□□□□□ -0.66
CNTNAP3B-205ENST00000476961 RGS22Q8NE09 1264 aa10.95□□□□□ -0.66
CNTNAP3B-205ENST00000476961 ADGBQ8N7X0 1667 aa10.95□□□□□ -0.66
CNTNAP3B-205ENST00000476961 ANKRD30AQ9BXX3 1397 aa10.94□□□□□ -0.66
CNTNAP3B-205ENST00000476961 FRAT1Q92837 279 aaPredicted RBP10.94□□□□□ -0.66
CNTNAP3B-205ENST00000476961 CD109Q6YHK3 1445 aa10.94□□□□□ -0.66
CNTNAP3B-205ENST00000476961 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
CNTNAP3B-205ENST00000476961 TRAPPC8Q9Y2L5 1435 aa10.93□□□□□ -0.66
CNTNAP3B-205ENST00000476961 WWC1Q8IX03 1113 aa10.93□□□□□ -0.66
CNTNAP3B-205ENST00000476961 PNNQ9H307 717 aaKnown RBP10.93□□□□□ -0.66
CNTNAP3B-205ENST00000476961 PRDM10Q9NQV6 1147 aa10.92□□□□□ -0.66
CNTNAP3B-205ENST00000476961 MAST1Q9Y2H9 1570 aa10.92□□□□□ -0.66
CNTNAP3B-205ENST00000476961 SMAP1Q8IYB5 467 aaPredicted RBP10.91□□□□□ -0.66
CNTNAP3B-205ENST00000476961 GLI2P10070 1586 aa10.91□□□□□ -0.66
CNTNAP3B-205ENST00000476961 VGLL3A8MV65 326 aa10.9□□□□□ -0.66
CNTNAP3B-205ENST00000476961 DDRGK1Q96HY6 314 aa10.9□□□□□ -0.66
CNTNAP3B-205ENST00000476961 ADGRL1O94910 1474 aa10.9□□□□□ -0.66
CNTNAP3B-205ENST00000476961 KIF15Q9NS87 1388 aa10.9□□□□□ -0.66
CNTNAP3B-205ENST00000476961 SCAPERQ9BY12 1400 aa10.9□□□□□ -0.67
CNTNAP3B-205ENST00000476961 AFAP1Q8N556 730 aa10.89□□□□□ -0.67
CNTNAP3B-205ENST00000476961 LAS1LQ9Y4W2 734 aaKnown RBP10.89□□□□□ -0.67
CNTNAP3B-205ENST00000476961 DIP2BQ9P265 1576 aa10.89□□□□□ -0.67
CNTNAP3B-205ENST00000476961 ANKRD50Q9ULJ7 1429 aa10.89□□□□□ -0.67
CNTNAP3B-205ENST00000476961 MAP3K4Q9Y6R4 1608 aa10.89□□□□□ -0.67
CNTNAP3B-205ENST00000476961 CLCN1P35523 988 aa10.88□□□□□ -0.67
CNTNAP3B-205ENST00000476961 POLR3GLQ9BT43 218 aa10.88□□□□□ -0.67
CNTNAP3B-205ENST00000476961 FAM69CQ0P6D2 419 aa10.88□□□□□ -0.67
CNTNAP3B-205ENST00000476961 TRIM52Q96A61 297 aa10.88□□□□□ -0.67
CNTNAP3B-205ENST00000476961 ZHX1Q9UKY1 873 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms