RNA–Protein interactions for RNA: ENST00000476916.5

KPNA1-206, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-206ENST00000476916 ZNF467Q7Z7K2 595 aaPredicted RBP12.94□□□□□ -0.34
KPNA1-206ENST00000476916 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
KPNA1-206ENST00000476916 KIAA0556O60303 1618 aa12.93□□□□□ -0.34
KPNA1-206ENST00000476916 ARHGEF40Q8TER5 1519 aa12.93□□□□□ -0.34
KPNA1-206ENST00000476916 SUPT5HO00267 1087 aaKnown RBP12.92□□□□□ -0.34
KPNA1-206ENST00000476916 CADPS2Q86UW7 1296 aa12.92□□□□□ -0.34
KPNA1-206ENST00000476916 UACAQ9BZF9 1416 aa12.91□□□□□ -0.34
KPNA1-206ENST00000476916 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
KPNA1-206ENST00000476916 CEBPAP49715 358 aaPredicted RBP12.91□□□□□ -0.34
KPNA1-206ENST00000476916 FANCAO15360 1455 aa12.91□□□□□ -0.34
KPNA1-206ENST00000476916 FRMPD1Q5SYB0 1578 aa12.9□□□□□ -0.34
KPNA1-206ENST00000476916 KCNV2Q8TDN2 545 aa12.9□□□□□ -0.34
KPNA1-206ENST00000476916 WDR70Q9NW82 654 aa12.9□□□□□ -0.34
KPNA1-206ENST00000476916 ALKQ9UM73 1620 aa12.9□□□□□ -0.34
KPNA1-206ENST00000476916 SIGLEC1Q9BZZ2 1709 aa12.9□□□□□ -0.34
KPNA1-206ENST00000476916 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
KPNA1-206ENST00000476916 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
KPNA1-206ENST00000476916 PDAP1Q13442 181 aaKnown RBP12.88□□□□□ -0.35
KPNA1-206ENST00000476916 SETBP1Q9Y6X0 1596 aa12.88□□□□□ -0.35
KPNA1-206ENST00000476916 PHLDB1Q86UU1 1377 aa12.87□□□□□ -0.35
KPNA1-206ENST00000476916 MLECQ14165 292 aa12.84□□□□□ -0.35
KPNA1-206ENST00000476916 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
KPNA1-206ENST00000476916 MFRPQ9BY79 579 aa12.82□□□□□ -0.36
KPNA1-206ENST00000476916 ARHGEF12Q9NZN5 1544 aa12.82□□□□□ -0.36
KPNA1-206ENST00000476916 PTPRKQ15262 1439 aa12.81□□□□□ -0.36
KPNA1-206ENST00000476916 SLC34A2O95436 690 aa12.81□□□□□ -0.36
KPNA1-206ENST00000476916 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
KPNA1-206ENST00000476916 PODXL2Q9NZ53 605 aa12.81□□□□□ -0.36
KPNA1-206ENST00000476916 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
KPNA1-206ENST00000476916 NEUROD2Q15784 382 aa12.8□□□□□ -0.36
KPNA1-206ENST00000476916 PCDHB8Q9UN66 801 aa12.8□□□□□ -0.36
KPNA1-206ENST00000476916 PCDHB13Q9Y5F0 798 aa12.8□□□□□ -0.36
KPNA1-206ENST00000476916 CAMSAP1Q5T5Y3 1602 aa12.79□□□□□ -0.36
KPNA1-206ENST00000476916 NCKAP5LQ9HCH0 1330 aa12.78□□□□□ -0.36
KPNA1-206ENST00000476916 PSEN1P49768 467 aa12.77□□□□□ -0.37
KPNA1-206ENST00000476916 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.37
KPNA1-206ENST00000476916 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
KPNA1-206ENST00000476916 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
KPNA1-206ENST00000476916 AKNAQ7Z591 1439 aa12.77□□□□□ -0.37
KPNA1-206ENST00000476916 CHADLQ6NUI6 762 aa12.76□□□□□ -0.37
KPNA1-206ENST00000476916 TRIM52Q96A61 297 aa12.76□□□□□ -0.37
KPNA1-206ENST00000476916 CARMIL2Q6F5E8 1435 aa12.76□□□□□ -0.37
KPNA1-206ENST00000476916 CPS1P31327 1500 aa12.76□□□□□ -0.37
KPNA1-206ENST00000476916 SENP3-EIF4A1A0A087X0R7 540 aa12.75□□□□□ -0.37
KPNA1-206ENST00000476916 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
KPNA1-206ENST00000476916 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
KPNA1-206ENST00000476916 YY1P25490 414 aa12.73□□□□□ -0.37
KPNA1-206ENST00000476916 NEO1Q92859 1461 aa12.72□□□□□ -0.37
KPNA1-206ENST00000476916 RANGAP1P46060 587 aaPredicted RBP12.72□□□□□ -0.37
KPNA1-206ENST00000476916 PPP1R37O75864 691 aa12.7□□□□□ -0.38
KPNA1-206ENST00000476916 SLC24A3Q9HC58 644 aa12.7□□□□□ -0.38
KPNA1-206ENST00000476916 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
KPNA1-206ENST00000476916 LRP5O75197 1615 aa12.7□□□□□ -0.38
KPNA1-206ENST00000476916 FBXO22Q8NEZ5 403 aa12.69□□□□□ -0.38
KPNA1-206ENST00000476916 RICTORQ6R327 1708 aa12.68□□□□□ -0.38
KPNA1-206ENST00000476916 LRRC7Q96NW7 1537 aa12.68□□□□□ -0.38
KPNA1-206ENST00000476916 E2F4Q16254 413 aa12.68□□□□□ -0.38
KPNA1-206ENST00000476916 WRNQ14191 1432 aaPredicted RBP eCLIP12.66□□□□□ -0.38
KPNA1-206ENST00000476916 TRAPPC8Q9Y2L5 1435 aa12.66□□□□□ -0.38
KPNA1-206ENST00000476916 SOX12O15370 315 aa12.66□□□□□ -0.38
KPNA1-206ENST00000476916 NLRP6P59044 892 aa12.66□□□□□ -0.38
KPNA1-206ENST00000476916 C3P01024 1663 aa12.66□□□□□ -0.38
KPNA1-206ENST00000476916 ZFYVE16Q7Z3T8 1539 aa12.66□□□□□ -0.38
KPNA1-206ENST00000476916 UBTFP17480 764 aaKnown RBP12.64□□□□□ -0.39
KPNA1-206ENST00000476916 EFCAB3Q8N7B9 438 aa12.64□□□□□ -0.39
KPNA1-206ENST00000476916 TCOF1Q13428 1488 aaKnown RBP12.64□□□□□ -0.39
KPNA1-206ENST00000476916 SHANK2Q9UPX8 1470 aa12.64□□□□□ -0.39
KPNA1-206ENST00000476916 FHOD3Q2V2M9 1422 aa12.63□□□□□ -0.39
KPNA1-206ENST00000476916 EFCAB5A4FU69 1503 aa12.63□□□□□ -0.39
KPNA1-206ENST00000476916 TESPA1A2RU30 521 aaPredicted RBP12.63□□□□□ -0.39
KPNA1-206ENST00000476916 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
KPNA1-206ENST00000476916 PLA2R1Q13018 1463 aa12.63□□□□□ -0.39
KPNA1-206ENST00000476916 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
KPNA1-206ENST00000476916 CDK12Q9NYV4 1490 aaPredicted RBP12.62□□□□□ -0.39
KPNA1-206ENST00000476916 DENND4BO75064 1496 aaPredicted RBP12.61□□□□□ -0.39
KPNA1-206ENST00000476916 ABCA9Q8IUA7 1624 aa12.61□□□□□ -0.39
KPNA1-206ENST00000476916 RAPGEF6Q8TEU7 1601 aa12.61□□□□□ -0.39
KPNA1-206ENST00000476916 PHF8Q9UPP1 1060 aa12.6□□□□□ -0.39
KPNA1-206ENST00000476916 CEP350Q5VT06 3117 aa12.6□□□□□ -0.39
KPNA1-206ENST00000476916 SEMA3EO15041 775 aa12.59□□□□□ -0.39
KPNA1-206ENST00000476916 CABP2Q9NPB3 220 aa12.59□□□□□ -0.39
KPNA1-206ENST00000476916 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
KPNA1-206ENST00000476916 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
KPNA1-206ENST00000476916 DISP1Q96F81 1524 aa12.57□□□□□ -0.4
KPNA1-206ENST00000476916 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
KPNA1-206ENST00000476916 ZMYND15Q9H091 742 aa12.57□□□□□ -0.4
KPNA1-206ENST00000476916 MAGI2Q86UL8 1455 aa12.57□□□□□ -0.4
KPNA1-206ENST00000476916 MAP3K13O43283 966 aa12.56□□□□□ -0.4
KPNA1-206ENST00000476916 ZMYND10O75800 440 aa12.56□□□□□ -0.4
KPNA1-206ENST00000476916 RXRBP28702 533 aa12.56□□□□□ -0.4
KPNA1-206ENST00000476916 ZNF772Q68DY9 489 aaPredicted RBP12.56□□□□□ -0.4
KPNA1-206ENST00000476916 RNF17Q9BXT8 1623 aaKnown RBP12.55□□□□□ -0.4
KPNA1-206ENST00000476916 PAK3O75914 559 aaPredicted RBP12.55□□□□□ -0.4
KPNA1-206ENST00000476916 TRIM26Q12899 539 aaPredicted RBP12.55□□□□□ -0.4
KPNA1-206ENST00000476916 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.4
KPNA1-206ENST00000476916 MFSD10Q14728 455 aa12.53□□□□□ -0.4
KPNA1-206ENST00000476916 ARIH1Q9Y4X5 557 aaPredicted RBP12.53□□□□□ -0.4
KPNA1-206ENST00000476916 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.41
KPNA1-206ENST00000476916 PDE4AP27815 886 aa12.51□□□□□ -0.41
KPNA1-206ENST00000476916 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms